FFCP PHASE1:Hg19::chr19:14529847..14529877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10212 | |EntrezGene=10212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17821 | |HGNC=17821 | ||
|TSSclassifier=strong | |||
|UniProt=O00148 | |UniProt=O00148 | ||
|association_with_transcript=28bp_to_ENST00000451994,NR_038336_5end | |association_with_transcript=28bp_to_ENST00000451994,NR_038336_5end | ||
|cluster_id=chr19:14529847..14529877,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_DDX39A_5end | |description=CAGE_peak_5_at_DDX39A_5end | ||
|id=chr19:14529847..14529877,- | |id=chr19:14529847..14529877,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.89e-09;2!CL:0000242;8.89e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.40e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.20e-18!235;DOID:14566!4.17e-17!239;DOID:2531!1.48e-10!51;DOID:0060083!1.48e-10!51;DOID:0050686!3.50e-09!137;DOID:0050687!9.96e-09!143;DOID:1240!5.45e-07!39 | |ontology_enrichment_disease=DOID:162!3.20e-18!235;DOID:14566!4.17e-17!239;DOID:2531!1.48e-10!51;DOID:0060083!1.48e-10!51;DOID:0050686!3.50e-09!137;DOID:0050687!9.96e-09!143;DOID:1240!5.45e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.48e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.816002764977012,0.313454721478088,0,1.23186982565596,0.376627918784408,0.229240217243854,0.410502947249729,0.393553906568396,0,0,0.309632246632152,0,0.6024118375565,0.369754010166788,1.93668001450754,0.284338464974843,0.880801318004542,0,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0.526768169550154,0.393419540227666,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,1.06976078313403,0.434473211648397,0,0,0.255725123687061,0.722878304769133,0,0,0,0.486634870302636,0.472674085820339,0.221729397462564,0.087834785693126,9.03755620934217,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,1.14398982156026,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0.208994966536811,0,0,0.66944122552934,0,0.760272105718513,0,0,0,0.357198913136319,0.22452937262617,0.337834441449967,1.53316637465883,0.949265659568129,0,0,0,0.436094052142534,0,0.12663051166458,0.662045904066094,1.14734648299525,0,0.560677600142307,1.06748995729705,0,0.622422070799533,0.269421344139376,0.817309515567294,0.302714855289863,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0.939475989150119,0.809364721840658,0.140450806702248,0,0.859840221182376,0.309977343527296,1.18800285728205,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0,0.89694817844431,0,0,1.20036438433761,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.414644220061482,0.252320850875628,0.72995471815166,0,0,1.38134921352481,0,0,0,0.168584690078102,0.482022059766964,0.330881918197182,0,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,3.97316789473185,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0.144366447761074,0,0,1.58040879591855,0,0.246217006087397,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,1.03664057770386,0.720599767084807,1.8936365013957,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.448524337381443,0,0.66004457238855,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.716243852959582,2.57795831185113,0.197030760201927,1.94064817373566,0.898401253958239,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0.553107505625109,0.260650843404249,0.195801157462741,0,0,0,0.213455115606889,0,1.66435439510497,0.907170879989041,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.164254312027618,0,0.697262270759755,0.120859449591622,0,0,0.114814448164607,0.182091168006717,0,0,0.231046011313244,0,0,0,0,0.170093705276516,0.647747748306418,0,0.812839312631559,0,0,0,0.223874754722178,0.438519753291869,0.784306353074702,0.256450125116389,0,0,0,0.183138929636687,0.330037999682352,0.574265537996172,0,0,0,0.616194468458578,1.22802939780904,0.964856007391714,0.751941714077915,0.580066775656914,0.93749290157711,0,0.165284915360978,0,0.510450849978337,0.30347334256665,0,0.31481234683064,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.92947049429925,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0,0.929015875628594,1.298422916788,0.426851060090485,0.478278818186467,0.997896857164083,0.191505370132367,0,0.324621940274555,0.280797178113459,0.912938716132769,0.156679895773023,0,0.338583555603207,0.481764225311099,0.403599414382095,0.425846237690326,0.343505344755765,0,0.223676107892416,0.166849141711909,0.390776190804081,1.11362469558097,0,0,1.33228787199128,0,0.561421621224659,0,0.242721043499027,0.445773537109913,0.284136146806413,0,0,0,0,0,0,0.824019371133798,1.68900326502395,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.984678443688556,0,0.0898683511473268,0.358042349351218,1.02314474045374,0,0,0,0.969332746095218,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0.709163045303809,3.10269035917318,0.874813840149763,3.81974988853243,0,0,0,0.221158519862449,0,0,0.435753854075961,0.278847488557207,0,0.113942055847001,0.4611278087761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| ||
|short_description=p5@DDX39A | |short_description=p5@DDX39A | ||
}} | }} |
Latest revision as of 04:48, 16 September 2015
Short description: | p5@DDX39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DDX39A_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 28bp_to_ENST00000451994, NR_038336_5end |
EntrezGene: | DDX39A |
HGNC: | 17821 |
UniProt: | O00148 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.40e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.48e-07 | 137 |