FFCP PHASE1:Hg19::chr18:61254570..61254585,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:61254570..61254585,+
|short_description=p2@SERPINB13
|description=CAGE_peak_2_at_SERPINB13_5end
|association_with_transcript=0bp_to_ENST00000539341_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5275 | |EntrezGene=5275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8944 | |HGNC=8944 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ40 | |UniProt=F5GZ40 | ||
|association_with_transcript=0bp_to_ENST00000539341_5end | |||
|cluster_id=chr18:61254570..61254585,+ | |||
|coexpression_cluster_id=C820 | |||
|description=CAGE_peak_2_at_SERPINB13_5end | |||
|id=chr18:61254570..61254585,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.07e-24!43;CL:0002159!4.23e-18!13;CL:0000223!6.11e-18!59;CL:0002251!8.66e-18!21;CL:0000066!1.63e-13!254;CL:0000622!4.65e-13!5;CL:0000154!8.25e-11!6;CL:0002368!9.69e-11!13;CL:0000076!3.39e-10!62;CL:0002077!4.31e-10!33;CL:0002621!1.85e-08!3;CL:0002166!1.95e-08!3;CL:0002623!3.30e-08!3;CL:0000362!3.97e-08!8;CL:0000240!4.13e-07!6;CL:0000311!4.13e-07!6;CL:0000079!4.13e-07!6;CL:0000237!4.13e-07!6;CL:0000036!4.13e-07!6;CL:0000357!4.13e-07!6;CL:0000114!4.13e-07!6;CL:0000150!4.67e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002251;1.74e-21;20!CL:0002159;4.50e-17;14!CL:0002076;3.09e-16;42!CL:0000622;3.35e-13;5!CL:0002621;2.77e-12;3!CL:0002166;3.44e-12;3!CL:0000154;5.16e-11;6!CL:0000317;2.63e-09;2!CL:1000448;2.63e-09;2!CL:0002308;2.63e-09;2!CL:0002140;2.63e-09;2!CL:0000244;3.34e-09;4!CL:0000731;3.34e-09;4!CL:0002077;1.72e-08;34!CL:0000362;1.65e-07;9!CL:0000150;2.36e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.80e-21,20;CL:0002076,6.84e-20,42;CL:0002159,4.08e-17,14;CL:0000223,3.14e-15,58;CL:0000066,8.20e-14,253;CL:0000622,3.80e-13,5;CL:0002621,2.72e-12,3;CL:0002166,2.94e-12,3;CL:0000076,5.51e-11,63;CL:0000154,5.73e-11,6;CL:0002077,7.68e-10,34;CL:0000317,2.74e-09,2;CL:1000448,2.74e-09,2;CL:0002308,2.74e-09,2;CL:0002140,2.74e-09,2;CL:0000244,2.93e-09,4;CL:0000731,2.93e-09,4;CL:0000362,1.68e-07,9;CL:0000150,2.52e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.23e-09;2!UBERON:0010056;3.23e-09;2!CL:0000223;3.51e-09;58 | |||
|ontology_enrichment_disease=DOID:1749!1.29e-20!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.41e-22;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.95e-22,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.18e-18!21;UBERON:0001004!4.21e-18!72;UBERON:0000161!5.03e-17!35;UBERON:0000165!3.64e-15!28;UBERON:0000930!3.64e-15!28;UBERON:0000974!4.24e-15!10;UBERON:0004119!1.01e-13!169;UBERON:0000925!1.01e-13!169;UBERON:0006595!1.01e-13!169;UBERON:0003729!3.61e-13!5;UBERON:0003102!1.68e-12!95;UBERON:0003343!6.62e-11!4;UBERON:0004785!6.62e-11!4;UBERON:0006562!9.99e-11!11;UBERON:0000065!1.38e-10!53;UBERON:0001444!6.52e-10!48;UBERON:0000344!7.85e-10!12;UBERON:0001007!2.34e-09!155;UBERON:0001555!2.34e-09!155;UBERON:0007026!2.34e-09!155;UBERON:0001723!5.24e-09!3;UBERON:0001033!5.24e-09!3;UBERON:0010056!5.24e-09!3;UBERON:0001042!7.06e-09!10;UBERON:0009145!7.06e-09!10;UBERON:0001949!1.85e-08!3;UBERON:0000365!2.52e-08!5;UBERON:0005910!6.27e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;3.20e-18;28!UBERON:0000161;1.63e-15;19!UBERON:0000166;1.63e-15;19!UBERON:0003729;4.55e-14;13!UBERON:0001723;3.59e-13;3!UBERON:0001033;3.59e-13;3!UBERON:0001949;2.77e-12;3!UBERON:0000344;1.43e-11;20!UBERON:0000974;2.63e-11;6!UBERON:0000486;4.91e-11;12!UBERON:0003343;8.12e-10;4!UBERON:0004785;8.12e-10;4!UBERON:0003127;2.28e-09;2!UBERON:0002419;2.63e-09;2!UBERON:0007771;2.63e-09;2!UBERON:0003297;2.63e-09;2!UBERON:0001821;2.63e-09;2!UBERON:0003487;2.63e-09;2!UBERON:0001820;2.63e-09;2!UBERON:0001708;2.93e-09;4!UBERON:0008895;2.93e-09;4!UBERON:0006562;3.65e-09;2!UBERON:0001555;8.17e-08;54!UBERON:0011159;1.71e-07;5!UBERON:0000365;1.89e-07;5!UBERON:0007811;1.96e-07;52!UBERON:0010371;3.98e-07;31!UBERON:0000002;5.18e-07;6!UBERON:0001560;5.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.43e-20,22;UBERON:0000165,1.69e-17,29;UBERON:0000930,1.69e-17,29;UBERON:0003102,8.10e-16,99;UBERON:0000153,1.19e-14,62;UBERON:0007811,1.19e-14,62;UBERON:0000033,1.69e-14,56;UBERON:0003729,4.37e-14,13;UBERON:0000161,1.45e-13,36;UBERON:0001723,3.82e-13,3;UBERON:0001033,3.82e-13,3;UBERON:0010056,3.82e-13,3;UBERON:0001949,2.72e-12,3;UBERON:0001004,1.33e-11,74;UBERON:0000344,1.39e-11,20;UBERON:0001444,4.96e-11,49;UBERON:0003343,8.50e-10,4;UBERON:0004785,8.50e-10,4;UBERON:0003127,2.23e-09,2;UBERON:0004119,2.31e-09,160;UBERON:0000925,2.31e-09,160;UBERON:0006595,2.31e-09,160;UBERON:0001708,2.61e-09,4;UBERON:0008895,2.61e-09,4;UBERON:0002419,2.74e-09,2;UBERON:0007771,2.74e-09,2;UBERON:0003297,2.74e-09,2;UBERON:0001821,2.74e-09,2;UBERON:0003487,2.74e-09,2;UBERON:0001820,2.74e-09,2;UBERON:0005089,2.74e-09,2;UBERON:0005088,2.74e-09,2;UBERON:0006562,3.67e-09,11;UBERON:0011159,1.56e-07,5;UBERON:0000365,1.71e-07,5;UBERON:0008814,1.87e-07,18;UBERON:0000002,5.18e-07,6;UBERON:0001560,5.18e-07,6;UBERON:0001042,7.39e-07,10;UBERON:0009145,7.39e-07,10;UBERON:0000974,8.89e-07,10 | |||
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| ||
|short_description=p2@SERPINB13 | |||
}} | }} |
Latest revision as of 04:09, 20 September 2015
Short description: | p2@SERPINB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SERPINB13_5end |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | 0bp_to_ENST00000539341_5end |
EntrezGene: | SERPINB13 |
HGNC: | 8944 |
UniProt: | F5GZ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.80e-21 | 20 |
endo-epithelial cell | 6.84e-20 | 42 |
general ecto-epithelial cell | 4.08e-17 | 14 |
endodermal cell | 3.14e-15 | 58 |
epithelial cell | 8.20e-14 | 253 |
acinar cell | 3.80e-13 | 5 |
gingival epithelial cell | 2.72e-12 | 3 |
epithelial cell of Malassez | 2.94e-12 | 3 |
squamous epithelial cell | 5.51e-11 | 63 |
protein secreting cell | 5.73e-11 | 6 |
ecto-epithelial cell | 7.68e-10 | 34 |
sebum secreting cell | 2.74e-09 | 2 |
epithelial cell of sweat gland | 2.74e-09 | 2 |
epithelial cell of skin gland | 2.74e-09 | 2 |
acinar cell of sebaceous gland | 2.74e-09 | 2 |
transitional epithelial cell | 2.93e-09 | 4 |
urothelial cell | 2.93e-09 | 4 |
epidermal cell | 1.68e-07 | 9 |
glandular epithelial cell | 2.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.95e-22 | 14 |