FFCP PHASE1:Hg19::chr18:36894194..36894210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:36894194..36894210,+ | |||
|coexpression_cluster_id=C565 | |coexpression_cluster_id=C565 | ||
|description=CAGE_peak_at_chr18:36894194..36894210,+ | |description=CAGE_peak_at_chr18:36894194..36894210,+ | ||
|id=chr18:36894194..36894210,+ | |id=chr18:36894194..36894210,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000037;1.08e-10;1!CL:0001024;1.08e-10;1!CL:0000167;1.19e-10;1!CL:0000164;1.19e-10;1!CL:0000502;1.19e-10;1!CL:0000172;1.19e-10;1!CL:0000173;1.19e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.08e-10,1;CL:0000167,1.19e-10,1;CL:0000164,1.19e-10,1;CL:0000502,1.19e-10,1;CL:0000172,1.19e-10,1;CL:0000173,1.19e-10,1;CL:0002351,1.19e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.19e-10;1!UBERON:0006242;1.30e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;1.19e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.19e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001954;2.37e-19;2!UBERON:0003022;2.37e-19;2!UBERON:0002421;2.37e-19;2!UBERON:0002600;2.37e-19;2!UBERON:0002619;2.09e-18;22!UBERON:0000349;5.75e-17;5!UBERON:0000956;3.31e-16;25!UBERON:0000203;3.31e-16;25!UBERON:0002791;4.99e-16;32!UBERON:0001869;3.41e-15;32!UBERON:0003528;5.36e-14;34!UBERON:0002020;5.36e-14;34!UBERON:0002780;8.03e-14;41!UBERON:0001890;8.03e-14;41!UBERON:0001893;2.48e-13;34!UBERON:0001950;1.66e-10;20!UBERON:0002022;2.87e-10;1!UBERON:0001874;2.87e-10;1!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53 | |||
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| ||
|short_description=p@chr18:36894194..36894210,+ | |short_description=p@chr18:36894194..36894210,+ | ||
}} | }} |
Latest revision as of 00:48, 26 July 2015
Short description: | p@chr18:36894194..36894210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:36894194..36894210, + |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.08e-10 | 1 |
peptide hormone secreting cell | 1.19e-10 | 1 |
enteroendocrine cell | 1.19e-10 | 1 |
type D enteroendocrine cell | 1.19e-10 | 1 |
somatostatin secreting cell | 1.19e-10 | 1 |
pancreatic D cell | 1.19e-10 | 1 |
progenitor cell of endocrine pancreas | 1.19e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 2.38e-19 | 2 |
lobe parts of cerebral cortex | 2.38e-19 | 2 |
hippocampal formation | 2.38e-19 | 2 |
limbic lobe | 2.38e-19 | 2 |
regional part of cerebral cortex | 2.06e-18 | 22 |
limbic system | 4.76e-17 | 5 |
regional part of telencephalon | 1.90e-16 | 32 |
cerebral hemisphere | 1.90e-16 | 32 |
cerebral cortex | 3.28e-16 | 25 |
pallium | 3.28e-16 | 25 |
regional part of forebrain | 5.02e-16 | 41 |
forebrain | 5.02e-16 | 41 |
anterior neural tube | 5.02e-16 | 41 |
future forebrain | 5.02e-16 | 41 |
brain grey matter | 1.88e-15 | 34 |
gray matter | 1.88e-15 | 34 |
telencephalon | 1.88e-15 | 34 |
regional part of nervous system | 3.42e-12 | 53 |
regional part of brain | 3.42e-12 | 53 |
neural tube | 1.74e-11 | 56 |
neural rod | 1.74e-11 | 56 |
future spinal cord | 1.74e-11 | 56 |
neural keel | 1.74e-11 | 56 |
adult organism | 3.38e-11 | 114 |
neocortex | 1.64e-10 | 20 |
putamen | 1.73e-10 | 1 |
pre-chordal neural plate | 1.85e-10 | 61 |
insula | 3.96e-10 | 1 |
central nervous system | 2.69e-09 | 81 |
brain | 4.02e-09 | 68 |
future brain | 4.02e-09 | 68 |
nervous system | 3.06e-08 | 89 |
neural plate | 1.69e-07 | 82 |
presumptive neural plate | 1.69e-07 | 82 |
neurectoderm | 4.27e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.19e-10 | 1 |