FFCP PHASE1:Hg19::chr17:76851239..76851259,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_AL110197_5end | |association_with_transcript=-369bp_to_AL110197_5end | ||
|cluster_id=chr17:76851239..76851259,- | |||
|coexpression_cluster_id=C706 | |coexpression_cluster_id=C706 | ||
|description=CAGE_peak_4_at_TIMP2_5end | |description=CAGE_peak_4_at_TIMP2_5end | ||
|id=chr17:76851239..76851259,- | |id=chr17:76851239..76851259,- | ||
|ontology_enrichment_celltype=CL:0000055!7.27e-21!180;CL:0000057!1.55e-16!75;CL:0000222!4.07e-10!119;CL:0002334!9.58e-07!12 | |ontology_enrichment_celltype=CL:0000055!7.27e-21!180;CL:0000057!1.55e-16!75;CL:0000222!4.07e-10!119;CL:0002334!9.58e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000499;4.88e-08;28!CL:0000134;1.00e-07;55!CL:0002334;1.14e-07;12!CL:0002620;1.45e-07;23!CL:0000057;1.52e-07;73!CL:0000048;2.08e-07;58!CL:0002320;2.58e-07;188!CL:0000723;8.16e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.67e-19,76;CL:0000048,1.29e-08,427;CL:0000499,4.57e-08,28;CL:0002334,7.54e-08,12;CL:0000723,8.04e-08,433;CL:0002620,2.03e-07,23;CL:0000222,4.28e-07,121;CL:0000034,7.75e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.74e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.75e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000468!1.29e-11!659;UBERON:0000467!6.17e-10!625;UBERON:0000480!7.82e-10!626;UBERON:0000475!7.21e-09!365;UBERON:0000914!1.05e-07!83;UBERON:0002329!1.05e-07!83;UBERON:0003077!1.05e-07!83;UBERON:0003059!1.05e-07!83;UBERON:0007282!1.05e-07!83;UBERON:0009618!1.05e-07!83;UBERON:0007285!1.05e-07!83;UBERON:0002199!1.34e-07!45;UBERON:0002416!1.34e-07!45;UBERON:0002049!1.80e-07!79;UBERON:0007798!1.80e-07!79;UBERON:0004290!2.56e-07!70;UBERON:0000055!3.30e-07!69;UBERON:0005256!4.30e-07!143;UBERON:0004872!8.40e-07!84 | |ontology_enrichment_uberon=UBERON:0000468!1.29e-11!659;UBERON:0000467!6.17e-10!625;UBERON:0000480!7.82e-10!626;UBERON:0000475!7.21e-09!365;UBERON:0000914!1.05e-07!83;UBERON:0002329!1.05e-07!83;UBERON:0003077!1.05e-07!83;UBERON:0003059!1.05e-07!83;UBERON:0007282!1.05e-07!83;UBERON:0009618!1.05e-07!83;UBERON:0007285!1.05e-07!83;UBERON:0002199!1.34e-07!45;UBERON:0002416!1.34e-07!45;UBERON:0002049!1.80e-07!79;UBERON:0007798!1.80e-07!79;UBERON:0004290!2.56e-07!70;UBERON:0000055!3.30e-07!69;UBERON:0005256!4.30e-07!143;UBERON:0004872!8.40e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.18e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.71e-09,315;UBERON:0004120,4.71e-09,315;UBERON:0006603,4.71e-09,315;UBERON:0002199,3.24e-08,46;UBERON:0002416,3.24e-08,46 | |||
|phase1_expression=9.08391896352783,19.6972481979704,14.0954404095971,10.007329835313,8.93922188854576,6.10636966870258,2.53299878168311,4.42203911398782,8.09675447419499,0.737201809504527,0.697801167972428,1.09220686065086,1.31883489114227,1.23766352960047,0.662794751455832,4.03395087871065,2.41077811209591,4.38186054232424,2.43966399395253,0.861847406537515,4.08001382488506,1.25381888591235,0.286235987131057,1.23186982565596,0.87879847716362,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,2.91090116511902,1.94336199611388,3.60605794687861,3.34415949192999,1.51150377475524,2.42584061187816,0.697287110717054,1.6446715520873,1.23882548358041,0.863077176966451,1.0246428261164,0.236482229888585,0.689491361473237,0,0,2.44715041405386,1.91034305040492,0.449446968890169,2.44867113896722,0.641858054152187,3.19668562899521,1.9791078011203,1.59570926097305,0,0.870627715885752,0,1.24564449799115,0.502497330513487,0.521482918420201,0,0,0,0.316462387440884,0.422510572623884,0,0.628975936525128,0.336985893439485,0.300353785683013,0.803627933485401,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,2.53007406669196,1.50401373190767,5.64901423947212,2.3858578411533,2.43317435151318,0.567208902984407,1.33037638477538,0.702678285545008,1.37528029272598,0,0,0.324547393654683,0.522389211897802,2.12732736830184,0,0,0,0.39752481473341,0.860234595106124,0,1.69592382577203,1.67799774483962,1.37559020970034,1.25396979922086,0.775250277507987,0.35576626268671,2.34304428935269,2.01414658554573,1.52054421143703,2.92874469057803,0,3.24056779152704,1.07159673940896,0.898117490504679,0.112611480483322,0,0.949265659568129,0.732806975721629,0,0,0,5.4666914686485,4.81195944325403,1.45650098894541,11.4734648299525,3.90135220418193,2.24271040056923,1.06748995729705,5.67335361359468,0.311211035399766,1.75123873690594,1.63461903113459,3.48122083583342,1.15235184896,0.70296429550139,1.5608003841516,1.1409436430889,2.83952493048422,2.11382097558777,0.971237666208789,1.68540968042698,1.02077085627447,1.96534907698829,7.95608515053394,8.31602000097437,9.89067717114228,3.64064544775211,11.4978902690598,0.673344455816265,5.88057043398232,2.77064115484183,1.31693286264251,3.37136575378922,4.05642759047811,0.340296549480063,4.84352016359927,3.20336083227851,3.60284231971255,2.10063767259082,5.35873152039882,2.06112432036503,5.58350568994769,3.54430297706659,5.16416127354353,2.52433774244115,4.05019554026117,7.11242650002772,13.4903645156313,3.42557133973977,1.52604533079439,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0,0,1.56449532329816,7.71889125831462,2.76269842704961,6.50115099244771,2.88751792667834,1.30137480043828,0.505754070234305,0.241011029883482,0.882351781859152,0,0.71181185733329,0.269662616320329,0.784885860501384,0,6.64339909162183,1.40241773803446,0.4115740113314,8.82052268313252,0,0,1.18157981336281,0,0.737930631258681,0.857839051492628,0.329250856225877,0,0.100528972411631,0,0.651616610620649,0,0,0.463721619900307,0.352226082707465,1.58803092537181,0.925971025153221,1.71228737011138,0,0.858486162094873,0.492434012174795,0.468008530278475,1.93220510975347,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0.720599767084807,0.12624243342638,2.85740524314761,3.4378958300245,5.86087236050235,6.84289784090821,5.65551209868279,3.90445975197093,7.43148724839503,1.68196626518041,4.3596006883328,1.3200891447771,1.42198887333556,3.57656445851882,3.381211010224,8.24408161413099,7.28052058379563,0,0,1.0656887160644,1.71573592389777,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,3.61727252471503,1.74306691720059,13.6962997919418,1.2162378064119,3.51579964002488,2.10833939483032,0.718874566474748,4.59447743336456,0,1.59259437334337,2.05476322550383,1.43248770591916,0,0.197030760201927,0.215627574859517,0,8.38512259934129,0,0,0.335032530668698,1.27587750330633,2.24702107184155,8.97484377612075,0.414415513436035,2.4538298343828,2.00068208423871,1.62759014219841,3.95144636908534,6.0665856191035,2.68094105557689,2.34282829985426,1.50473049863859,11.3703752027992,7.24311499047534,0.664225598535437,1.65932251687533,5.12613325361689,4.89502893656851,5.83343820478455,0,0.862856803274467,0.213455115606889,0,0,0.604780586659361,13.8940372378515,1.53461973288062,19.6462066103152,15.8892545077069,13.3043884757343,12.707459770345,4.45254199334973,3.70103265126373,2.48586415438378,1.56041596426237,10.904343012856,2.67283870457906,0.604297247958111,1.20303882181971,0.460404944679482,2.18147451512753,4.00600569614778,6.55622074797121,0,0.385076685522074,0,0,0.949964660035881,6.8240030442538,1.36074964221213,0.431831832204279,9.25363516141736,1.08378575017541,1.50506932156456,0.254876273045038,0,1.79099803777743,0,0,0.769350375349168,3.93617574839647,2.27764876265012,2.36994326789761,1.64825036673018,0.247528499761764,3.44559322797703,0.650060246036521,9.64103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| ||
|short_description=p4@TIMP2 | |short_description=p4@TIMP2 | ||
}} | }} |
Latest revision as of 23:14, 17 September 2015
Short description: | p4@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TIMP2_5end |
Coexpression cluster: | C706_Adipocyte_Preadipocyte_tenocyte_leiomyoma_chorionic_Olfactory_Hair |
Association with transcript: | -369bp_to_AL110197_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.67e-19 | 76 |
multi fate stem cell | 1.29e-08 | 427 |
stromal cell | 4.57e-08 | 28 |
preadipocyte | 7.54e-08 | 12 |
somatic stem cell | 8.04e-08 | 433 |
skin fibroblast | 2.03e-07 | 23 |
mesodermal cell | 4.28e-07 | 121 |
stem cell | 7.75e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.71e-09 | 315 |
mesoderm-derived structure | 4.71e-09 | 315 |
presumptive mesoderm | 4.71e-09 | 315 |
integument | 3.24e-08 | 46 |
integumental system | 3.24e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.75e-07 | 14 |