FFCP PHASE1:Hg19::chr17:72270368..72270377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64446 | |EntrezGene=64446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18744 | |HGNC=18744 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZS0 | |UniProt=Q9GZS0 | ||
|association_with_transcript=-8bp_to_ENST00000311014,NM_001172810,NM_023036_5end | |association_with_transcript=-8bp_to_ENST00000311014,NM_001172810,NM_023036_5end | ||
|cluster_id=chr17:72270368..72270377,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_DNAI2_5end | |description=CAGE_peak_4_at_DNAI2_5end | ||
|id=chr17:72270368..72270377,+ | |id=chr17:72270368..72270377,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.60e-22!5;CL:0000457!1.60e-22!5;CL:0002191!1.60e-22!5;CL:0000097!1.60e-22!5;CL:0000831!1.60e-22!5;CL:0002028!1.60e-22!5;CL:0000163!2.12e-12!9;CL:0000791!2.01e-08!18;CL:0000789!2.01e-08!18;CL:0002420!2.01e-08!18;CL:0002419!2.01e-08!18;CL:0000790!2.01e-08!18 | |ontology_enrichment_celltype=CL:0002274!1.60e-22!5;CL:0000457!1.60e-22!5;CL:0002191!1.60e-22!5;CL:0000097!1.60e-22!5;CL:0000831!1.60e-22!5;CL:0002028!1.60e-22!5;CL:0000163!2.12e-12!9;CL:0000791!2.01e-08!18;CL:0000789!2.01e-08!18;CL:0002420!2.01e-08!18;CL:0002419!2.01e-08!18;CL:0000790!2.01e-08!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001894!1.25e-10!7;UBERON:0006222!1.25e-10!7;UBERON:0000007!4.39e-10!2;UBERON:0003127!6.02e-10!2;UBERON:0007023!3.11e-09!115;UBERON:0001049!5.42e-07!57;UBERON:0005068!5.42e-07!57;UBERON:0006241!5.42e-07!57;UBERON:0007135!5.42e-07!57;UBERON:0001896!9.60e-07!3;UBERON:0005290!9.60e-07!3;UBERON:0010096!9.60e-07!3 | |ontology_enrichment_uberon=UBERON:0001894!1.25e-10!7;UBERON:0006222!1.25e-10!7;UBERON:0000007!4.39e-10!2;UBERON:0003127!6.02e-10!2;UBERON:0007023!3.11e-09!115;UBERON:0001049!5.42e-07!57;UBERON:0005068!5.42e-07!57;UBERON:0006241!5.42e-07!57;UBERON:0007135!5.42e-07!57;UBERON:0001896!9.60e-07!3;UBERON:0005290!9.60e-07!3;UBERON:0010096!9.60e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001897;8.10e-26;2!UBERON:0010225;8.10e-26;2!UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0002784;1.21e-13;4!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0001894;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,7.14e-26,2;UBERON:0010225,7.14e-26,2;UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0002784,1.13e-13,4;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7 | |||
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| ||
|short_description=p4@DNAI2 | |short_description=p4@DNAI2 | ||
}} | }} |
Latest revision as of 07:15, 17 September 2015
Short description: | p4@DNAI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DNAI2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -8bp_to_ENST00000311014, NM_001172810, NM_023036_5end |
EntrezGene: | DNAI2 |
HGNC: | 18744 |
UniProt: | Q9GZS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 7.14e-26 | 2 |
thalamic complex | 7.14e-26 | 2 |
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
regional part of diencephalon | 1.13e-13 | 4 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |