FFCP PHASE1:Hg19::chr17:56356430..56356441,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:56356430..56356441,- | |||
|coexpression_cluster_id=C209 | |coexpression_cluster_id=C209 | ||
|description=CAGE_peak_at_chr17:56356430..56356441,- | |description=CAGE_peak_at_chr17:56356430..56356441,- | ||
|id=chr17:56356430..56356441,- | |id=chr17:56356430..56356441,- | ||
|ontology_enrichment_celltype=CL:0002057!9.41e-46!42;CL:0000860!2.56e-42!45;CL:0002194!8.19e-31!63;CL:0000576!8.19e-31!63;CL:0000040!8.19e-31!63;CL:0000559!8.19e-31!63;CL:0000763!5.33e-30!112;CL:0000049!5.33e-30!112;CL:0002009!1.07e-29!65;CL:0000557!2.24e-29!71;CL:0000839!3.45e-27!70;CL:0000766!1.31e-24!76;CL:0000037!2.22e-18!172;CL:0000566!2.22e-18!172;CL:0002032!5.54e-18!165;CL:0000837!5.54e-18!165;CL:0000988!5.96e-17!182;CL:0002393!9.15e-16!9;CL:0002397!9.15e-16!9;CL:0002087!1.03e-13!119;CL:0002031!6.15e-13!124;CL:0000738!7.78e-11!140 | |ontology_enrichment_celltype=CL:0002057!9.41e-46!42;CL:0000860!2.56e-42!45;CL:0002194!8.19e-31!63;CL:0000576!8.19e-31!63;CL:0000040!8.19e-31!63;CL:0000559!8.19e-31!63;CL:0000763!5.33e-30!112;CL:0000049!5.33e-30!112;CL:0002009!1.07e-29!65;CL:0000557!2.24e-29!71;CL:0000839!3.45e-27!70;CL:0000766!1.31e-24!76;CL:0000037!2.22e-18!172;CL:0000566!2.22e-18!172;CL:0002032!5.54e-18!165;CL:0000837!5.54e-18!165;CL:0000988!5.96e-17!182;CL:0002393!9.15e-16!9;CL:0002397!9.15e-16!9;CL:0002087!1.03e-13!119;CL:0002031!6.15e-13!124;CL:0000738!7.78e-11!140 | ||
|ontology_enrichment_celltype_v019=CL:0000037;3.82e-21;1!CL:0001024;3.82e-21;1!CL:0002032;6.31e-21;1!CL:0000557;6.31e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,4.22e-21,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:225;2.82e-21;1!DOID:8692;3.81e-16;31!DOID:74;2.47e-11;2!DOID:1240;1.24e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:225,2.82e-21,1;DOID:8692,3.62e-16,31;DOID:1240,6.92e-13,39;DOID:74,2.47e-11,2;DOID:2531,6.98e-10,51;DOID:0060083,6.98e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.18e-28!102;UBERON:0003061!2.18e-28!102;UBERON:0002371!7.03e-28!80;UBERON:0002405!1.91e-26!115;UBERON:0001474!1.63e-25!86;UBERON:0002193!3.09e-25!112;UBERON:0004765!1.11e-22!101;UBERON:0001434!1.11e-22!101;UBERON:0003081!1.09e-11!216;UBERON:0002204!3.01e-11!167;UBERON:0004177!4.57e-09!7 | |ontology_enrichment_uberon=UBERON:0002390!2.18e-28!102;UBERON:0003061!2.18e-28!102;UBERON:0002371!7.03e-28!80;UBERON:0002405!1.91e-26!115;UBERON:0001474!1.63e-25!86;UBERON:0002193!3.09e-25!112;UBERON:0004765!1.11e-22!101;UBERON:0001434!1.11e-22!101;UBERON:0003081!1.09e-11!216;UBERON:0002204!3.01e-11!167;UBERON:0004177!4.57e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22960483268332,0.553995408531877,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0.605399502633369,0,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,43.4993399967904,0,1.82587743226554,40.736772900986,0,0,0.642352300414798,20.5835701334869,2.12923118845163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.403383508709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22960483268332,0.553995408531877,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0.290796477559129,0,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0.605399502633369,0,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,43.4993399967904,0,1.82587743226554,40.736772900986,0,0,0.642352300414798,20.5835701334869,2.12923118845163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.403383508709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:56356430..56356441,- | |short_description=p@chr17:56356430..56356441,- | ||
}} | }} |
Latest revision as of 19:15, 25 July 2015
Short description: | p@chr17:56356430..56356441, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56356430..56356441, - |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 4.22e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
syndrome | 2.82e-21 | 1 |
myeloid leukemia | 3.62e-16 | 31 |
leukemia | 6.92e-13 | 39 |
hematopoietic system disease | 2.47e-11 | 2 |
hematologic cancer | 6.98e-10 | 51 |
immune system cancer | 6.98e-10 | 51 |