FFCP PHASE1:Hg19::chr17:48712143..48712165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8714 | |EntrezGene=8714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=54 | |HGNC=54 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAB7 | |UniProt=D6RAB7 | ||
|association_with_transcript=5bp_to_ENST00000515707_5end | |association_with_transcript=5bp_to_ENST00000515707_5end | ||
|cluster_id=chr17:48712143..48712165,+ | |||
|coexpression_cluster_id=C2419 | |coexpression_cluster_id=C2419 | ||
|description=CAGE_peak_2_at_ABCC3_5end | |description=CAGE_peak_2_at_ABCC3_5end | ||
|id=chr17:48712143..48712165,+ | |id=chr17:48712143..48712165,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.16e-07!254 | |ontology_enrichment_celltype=CL:0000066!1.16e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000128;2.44e-09;7!CL:0000126;2.44e-09;7!CL:0000127;2.44e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.56e-09,7;CL:0000126,3.56e-09,7;CL:0000127,3.56e-09,7;CL:0002453,3.56e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.41e-07;13!UBERON:0004161;5.36e-07;11!UBERON:0001041;8.19e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.16e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.88e-11!155;UBERON:0001555!3.88e-11!155;UBERON:0007026!3.88e-11!155;UBERON:0000062!5.07e-11!511;UBERON:0004921!1.19e-10!129;UBERON:0004185!1.19e-10!129;UBERON:0004119!2.24e-10!169;UBERON:0000925!2.24e-10!169;UBERON:0006595!2.24e-10!169;UBERON:0002100!6.43e-10!216;UBERON:0005177!7.19e-10!107;UBERON:0001048!7.59e-10!168;UBERON:0000077!7.78e-10!130;UBERON:0000481!9.33e-10!347;UBERON:0003104!2.17e-09!238;UBERON:0009142!2.17e-09!238;UBERON:0000468!3.01e-09!659;UBERON:0000475!3.05e-09!365;UBERON:0001041!1.04e-08!98;UBERON:0000467!2.42e-08!625;UBERON:0000480!3.44e-08!626;UBERON:0009569!5.34e-08!113;UBERON:0000466!8.52e-08!126;UBERON:0002417!2.43e-07!61;UBERON:0000916!2.43e-07!61;UBERON:0009497!5.49e-07!25;UBERON:0000015!5.49e-07!25;UBERON:0002423!5.49e-07!25;UBERON:0006235!5.49e-07!25;UBERON:0004161!5.49e-07!25;UBERON:0007499!7.39e-07!25;UBERON:0009856!8.05e-07!26 | |ontology_enrichment_uberon=UBERON:0001007!3.88e-11!155;UBERON:0001555!3.88e-11!155;UBERON:0007026!3.88e-11!155;UBERON:0000062!5.07e-11!511;UBERON:0004921!1.19e-10!129;UBERON:0004185!1.19e-10!129;UBERON:0004119!2.24e-10!169;UBERON:0000925!2.24e-10!169;UBERON:0006595!2.24e-10!169;UBERON:0002100!6.43e-10!216;UBERON:0005177!7.19e-10!107;UBERON:0001048!7.59e-10!168;UBERON:0000077!7.78e-10!130;UBERON:0000481!9.33e-10!347;UBERON:0003104!2.17e-09!238;UBERON:0009142!2.17e-09!238;UBERON:0000468!3.01e-09!659;UBERON:0000475!3.05e-09!365;UBERON:0001041!1.04e-08!98;UBERON:0000467!2.42e-08!625;UBERON:0000480!3.44e-08!626;UBERON:0009569!5.34e-08!113;UBERON:0000466!8.52e-08!126;UBERON:0002417!2.43e-07!61;UBERON:0000916!2.43e-07!61;UBERON:0009497!5.49e-07!25;UBERON:0000015!5.49e-07!25;UBERON:0002423!5.49e-07!25;UBERON:0006235!5.49e-07!25;UBERON:0004161!5.49e-07!25;UBERON:0007499!7.39e-07!25;UBERON:0009856!8.05e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.68e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.91e-11,101;UBERON:0002417,5.13e-09,60;UBERON:0000916,5.13e-09,60;UBERON:0009497,6.53e-09,25;UBERON:0000015,6.53e-09,25;UBERON:0002423,6.53e-09,25;UBERON:0006235,6.53e-09,25;UBERON:0004161,6.53e-09,25;UBERON:0007499,1.32e-08,25;UBERON:0005172,3.37e-08,54;UBERON:0005173,3.37e-08,54;UBERON:0009569,3.89e-08,112;UBERON:0009856,4.05e-08,26;UBERON:0008835,1.39e-07,22;UBERON:0003894,1.39e-07,22;UBERON:0009854,4.16e-07,23;UBERON:0002100,5.66e-07,199 | |||
|phase1_expression=1.45342703416445,0.856402095563933,0.704772020479856,4.00293193412522,1.34088328328186,1.74467704820074,0,1.26343974685366,1.04474251279935,0.245733936501509,3.48900583986214,0,0,0.866364470720326,0.662794751455832,0.672325146451775,0,0,0.975865597581014,2.09305798730539,1.22400414746552,5.01527554364941,2.57612388417951,2.32686522623903,3.01302335027527,0,0,0,0.393364276848904,0,0,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0,1.56740831967947,0.647787332037959,1.80302897343931,0.145398238779565,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0.217188844705117,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0.419317291016752,0.22465726229299,0,0,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.255725123687061,1.44575660953827,2.50668955317945,1.44846518960824,0.795285947051099,0.973269740605272,0.756278537312543,0.665188192387692,0.614843499851882,0.523916301990851,0.364295288292542,0.741568885568859,7.14004266040303,6.79105975467142,3.45690697349049,0,0,0,0.596287222100115,0,0.694281003215189,1.13061588384802,0,0,0.626984899610432,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,1.12135520028461,0,1.48000529050296,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0.70296429550139,0.312160076830321,0,1.04614076386261,0.469737994575059,0.161872944368132,0.140450806702248,0.816616685019573,0.245668634623536,1.03325781175765,1.18800285728205,0,3.64064544775211,7.90479955997862,0,0.250237039743928,0,0.877955241761676,0.30648779579902,0.751190294532984,0.113432183160021,0.717558542755448,0.85422955527427,2.11931901159562,2.10063767259082,0.824420233907511,3.60696756063881,1.30281799432113,0.675105328965065,0.876933046450788,0.757301322732344,0.644349290496095,0.646584227275248,3.55009592516614,0.302256294682921,0.847802961552438,0,0.545492241181669,0,0,0,0,0,0,0,3.12899064659632,6.43240938192885,0,2.78620756819187,0,0.709840800239063,0.842923450390509,1.44606617930089,1.43382164552112,1.52515610864684,0.949082476444386,0.674156540800822,0.588664395376038,0.38474715694639,0,0,0.8231480226628,1.47008711385542,6.33775174109154,9.82827216677626,2.95394953340702,0,2.33678033231916,1.54411029268673,0,0,0.603173834469785,0.462942225792648,0.651616610620649,5.19967392639789,0,0.811512834825538,0.234817388471643,0.577465791044295,0.925971025153221,0.570762456703795,0,0,1.23108503043699,3.7440682422278,1.0404181360211,0,0,0.708875486211932,0.358234090811393,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,1.16344544182,3.57656445851882,0,1.06375246633948,0,1.54324424557285,0,0.799266537048298,0.285955987316295,1.62786481617433,0.823240336780769,0,0,0.791951872933429,0.602878754119172,0,0.699810938274399,0,2.00902836572851,2.10833939483032,0,1.14861935834114,1.42636905040718,0.579125226670317,2.4657158706046,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.981531933753119,0,0.271265023699736,0.207970861530807,0.535286966391485,0.630809660135739,1.40569697991256,0,0,0,0,0,0.521301686808497,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0.992431231275107,1.84154367945675,1.40330047216537,0.384417447767103,1.02341449813341,0.804269605718038,2.96836132889982,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.604297247958111,0.601519410909855,0.0920809889358963,0.803701137152247,0.364182336013434,0.786746489756545,0,0,3.13739907670742,0,0.633309773357254,0,0.170093705276516,0.215915916102139,0,1.08378575017541,3.01013864312912,0.764628819135115,0,0.671624264166535,0,0.261435451024901,0,0,0.976135183992909,1.23649213977267,0.0915694648183434,0.247528499761764,0,0.650060246036521,0,0,0.616194468458578,0.614014698904518,0.137836572484531,0.214840489736547,0.725083469571143,0.511359764496605,0,0,0.192190067365106,1.14851441245126,0.30347334256665,0,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0,0.143124886741991,0,0,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,1.46290121726877,0.243713489631284,0,0.545999645631943,0.141405431953713,0,0,0.66343897524122,0,1.15755106853338,1.31178950409327,0,0,0,0.430234056612155,0.294747123039363,0.35667105148125,0,0.633322905892992,0.329294892959902,3.41525856389144,3.84928192269481,0.577332676353072,0,1.08890984861323,0.659006605437454,0,0,0.443430153536676,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,1.29694662238543,0,0,0,3.84991942105343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0.439524537815682,0,0,1.70481688083848,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,4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| ||
|short_description=p2@ABCC3 | |short_description=p2@ABCC3 | ||
}} | }} |
Latest revision as of 03:22, 16 September 2015
Short description: | p2@ABCC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ABCC3_5end |
Coexpression cluster: | C2419_tubular_hepatoma_lung_signet_bile_pleomorphic_Mesenchymal |
Association with transcript: | 5bp_to_ENST00000515707_5end |
EntrezGene: | ABCC3 |
HGNC: | 54 |
UniProt: | D6RAB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.56e-09 | 7 |
macroglial cell | 3.56e-09 | 7 |
astrocyte | 3.56e-09 | 7 |
oligodendrocyte precursor cell | 3.56e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.91e-11 | 101 |
abdominal segment of trunk | 5.13e-09 | 60 |
abdomen | 5.13e-09 | 60 |
epithelium of foregut-midgut junction | 6.53e-09 | 25 |
anatomical boundary | 6.53e-09 | 25 |
hepatobiliary system | 6.53e-09 | 25 |
foregut-midgut junction | 6.53e-09 | 25 |
septum transversum | 6.53e-09 | 25 |
epithelial sac | 1.32e-08 | 25 |
abdomen element | 3.37e-08 | 54 |
abdominal segment element | 3.37e-08 | 54 |
subdivision of trunk | 3.89e-08 | 112 |
sac | 4.05e-08 | 26 |
hepatic diverticulum | 1.39e-07 | 22 |
liver primordium | 1.39e-07 | 22 |
digestive tract diverticulum | 4.16e-07 | 23 |
trunk | 5.66e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.16e-07 | 106 |