FFCP PHASE1:Hg19::chr18:52988979..52988993,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:52988979..52988993,-
|short_description=p18@TCF4
|description=CAGE_peak_18_at_TCF4_5end
|association_with_transcript=-10bp_to_ENST00000457482_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000457482_5end | |||
|cluster_id=chr18:52988979..52988993,- | |||
|coexpression_cluster_id=C2464 | |||
|description=CAGE_peak_18_at_TCF4_5end | |||
|id=chr18:52988979..52988993,- | |||
|ontology_enrichment_celltype=CL:0000945!9.12e-13!24;CL:0000826!9.12e-13!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.61e-13;24!CL:0002138;2.22e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.86e-14,24;CL:0000826,4.86e-14,24;CL:0005020,3.71e-07,6;CL:0002138,3.71e-07,6;CL:0005022,3.71e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;2.22e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;8.40e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.92e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.65e-26!115;UBERON:0001017!5.60e-21!82;UBERON:0000073!6.12e-21!94;UBERON:0001016!6.12e-21!94;UBERON:0005743!6.03e-20!86;UBERON:0001049!2.54e-18!57;UBERON:0005068!2.54e-18!57;UBERON:0006241!2.54e-18!57;UBERON:0007135!2.54e-18!57;UBERON:0003080!3.30e-17!42;UBERON:0002616!6.04e-17!59;UBERON:0000955!1.14e-16!69;UBERON:0006238!1.14e-16!69;UBERON:0002780!1.23e-16!41;UBERON:0001890!1.23e-16!41;UBERON:0006240!1.23e-16!41;UBERON:0001893!4.20e-16!34;UBERON:0002020!4.59e-16!34;UBERON:0003528!4.59e-16!34;UBERON:0002791!1.72e-15!33;UBERON:0001869!4.05e-15!32;UBERON:0002346!4.54e-15!90;UBERON:0000956!1.88e-14!25;UBERON:0000203!1.88e-14!25;UBERON:0000924!2.52e-14!173;UBERON:0006601!2.52e-14!173;UBERON:0002619!1.48e-13!22;UBERON:0003075!2.94e-13!86;UBERON:0007284!2.94e-13!86;UBERON:0004121!7.94e-13!169;UBERON:0001950!1.56e-12!20;UBERON:0003056!1.15e-10!61;UBERON:0000153!1.59e-09!129;UBERON:0007811!1.59e-09!129;UBERON:0000033!8.45e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.77e-16;22!UBERON:0001950;4.83e-16;20!UBERON:0002791;6.33e-14;32!UBERON:0000956;1.01e-13;25!UBERON:0000203;1.01e-13;25!UBERON:0001869;1.31e-13;32!UBERON:0001893;4.95e-13;34!UBERON:0003528;1.54e-12;34!UBERON:0002020;1.54e-12;34!UBERON:0002780;1.43e-11;41!UBERON:0001890;1.43e-11;41!UBERON:0000073;1.91e-08;53!UBERON:0002616;1.91e-08;53!UBERON:0001016;4.89e-08;83!UBERON:0001871;5.50e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.01e-19,89;UBERON:0001017,6.10e-18,81;UBERON:0002619,5.20e-16,22;UBERON:0001950,9.13e-16,20;UBERON:0001893,1.29e-15,34;UBERON:0003528,1.52e-15,34;UBERON:0002020,1.52e-15,34;UBERON:0002791,3.08e-15,32;UBERON:0001869,3.16e-15,32;UBERON:0002780,1.38e-14,41;UBERON:0001890,1.38e-14,41;UBERON:0003080,1.38e-14,41;UBERON:0006240,1.38e-14,41;UBERON:0001049,2.54e-14,56;UBERON:0005068,2.54e-14,56;UBERON:0006241,2.54e-14,56;UBERON:0007135,2.54e-14,56;UBERON:0004121,4.75e-14,171;UBERON:0000924,4.75e-14,171;UBERON:0006601,4.75e-14,171;UBERON:0000956,1.32e-13,25;UBERON:0000203,1.32e-13,25;UBERON:0000073,4.41e-13,53;UBERON:0002616,4.41e-13,53;UBERON:0007023,1.65e-12,114;UBERON:0000955,2.11e-12,68;UBERON:0006238,2.11e-12,68;UBERON:0002346,4.90e-12,86;UBERON:0003075,5.46e-10,82;UBERON:0007284,5.46e-10,82;UBERON:0010371,8.88e-10,104;UBERON:0010314,6.53e-09,132;UBERON:0003056,1.03e-08,61;UBERON:0001871,5.30e-08,6;UBERON:0011216,9.74e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,0,1.20538905604795,0,0,0,0,0,0.85870796139317,0.547497700291537,0.502170558379211,2.36881557818649,2.62721886239826,2.2826126580967,0,0,0.309632246632152,0,0,0,0.0774672005803016,2.27470771979874,0.880801318004542,0,0.200544447470142,0,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0.426224750532694,2.61188314765726,0.56738522469114,0,0,0,0,7.26479403160043,1.10483290796269,1.89877432464531,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,1.28019066769952,0.800791974072025,1.72425731986345,1.98313461835459,2.86216126360609,0.569212969109448,1.17447437874188,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0.973269740605272,0.0945348171640679,0,0,0.458426764241994,0,0,0,0,0.132957960518865,3.33886874027479,1.71598473234038,0.74291500265913,1.59009925893364,0,0,0,0,0.275118041940067,1.25396979922086,1.03366703667732,0.35576626268671,1.33888245105868,0.805658634218294,0.760272105718513,9.76248230192678,0.367663080345869,0,0.446498641420399,0,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0.454072282934794,1.72852777344,0.234321431833797,0,0,1.04614076386261,0.117434498643765,0,0.280901613404497,0.61246251376468,0,0.723280468230358,0,0.247266929278557,0,0,0,0.250237039743928,0.277064115484183,0,0,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.276149695926898,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.234817388471643,13.2817131940188,10.1856812766854,17.8838903100522,0,0,0.492434012174795,0,1.0404181360211,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.2933531432838,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,3.64871341923571,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,2.54094624222463,11.712586847186,8.50617694055465,13.9038500227509,10.8449587781038,0,0,0,0.12269149171914,0,0,0,0,0.630809660135739,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,1.30325421702124,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0.355123450626254,0.246381468041427,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,1.48863347743867,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0,2.60124445176006,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0.222886768554957,0,0,0.296964680832639,0,0,2.2507106625682,0.445234820091624,0,0,1.79323189425963,1.38141957765574,0,0,1.84627208191604,0,0,0,0.511572370226872,0.887790650732402,0,2.22273980289274,0,1.76259386507517,11.9768278800717,0,0,1.44999915086959,0.455173793141999,0,0,0,1.16641845353302,3.29887490373255,0,1.08536794762867,0,1.54810963903714,0.886642856860642,0.658156191461918,0,0,1.15425387755696,0,0,0,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0.432777279484182,1.99052386215701,0.353830258013357,0,0,0,0,0.741412462787447,2.40773294189637,1.1713222286267,0.364909578431332,0,0,0.789168805698781,1.20990716048664,8.87611008728421,2.40109002588254,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.969890164884194,0,1.58186518546373,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0.203996435272644,0,0,1.09524303113594,0,0,0,2.51354161145029,2.52076466412852,0.717873024576814,0.998395002494955,0,2.00854311697685,3.29199015184959,0,0,0,0,0,0,3.72562661089452,0.795229689809303,1.77064427945048,0,0,0,0,0,1.39723980313457,0,0.157611414598396,0.734364233889974,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.3223260174269,0,0,1.49502377594773,0.78602152549833,2.07119527673598,0.992332043623902,1.18566979138767,2.80122976276061,0,0.544017803369474,4.0110383043632,0.612691153526923,2.29510841496863,0,0.886068179966986,1.83039397352945,1.752673029891,0,1.10929051536852,0.310482014706917,0.138348634936231,0.124980407962107,0,0,0,0,2.17381542916238,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0.591420599958536,0.318593534327405,0.4498031121636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| ||
|short_description=p18@TCF4 | |||
}} | }} |
Latest revision as of 20:37, 19 September 2015
Short description: | p18@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TCF4_5end |
Coexpression cluster: | C2464_lymphoma_acute_occipital_Neurons_cerebellum_small_parietal |
Association with transcript: | -10bp_to_ENST00000457482_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.86e-14 | 24 |
pro-B cell | 4.86e-14 | 24 |
lymphangioblast | 3.71e-07 | 6 |
endothelial cell of lymphatic vessel | 3.71e-07 | 6 |
vascular lymphangioblast | 3.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.92e-08 | 10 |