FFCP PHASE1:Hg19::chr17:48262330..48262350,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-327bp_to_AB032018_5end | |association_with_transcript=-327bp_to_AB032018_5end | ||
|cluster_id=chr17:48262330..48262350,+ | |||
|coexpression_cluster_id=C1051 | |coexpression_cluster_id=C1051 | ||
|description=CAGE_peak_5_at_AB032018_5end | |description=CAGE_peak_5_at_AB032018_5end | ||
|id=chr17:48262330..48262350,+ | |id=chr17:48262330..48262350,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.64e-30!180;CL:0000057!1.56e-25!75;CL:0000048!1.49e-13!430;CL:0000723!6.58e-13!436;CL:0000034!1.57e-12!444;CL:0002371!3.82e-10!591;CL:0000144!1.26e-09!625;CL:0002334!4.32e-09!12;CL:0002320!1.14e-08!365;CL:0000499!3.86e-08!27;CL:0000134!1.27e-07!358;CL:0002620!1.51e-07!23;CL:0000219!2.36e-07!390;CL:0000680!2.75e-07!57;CL:0000056!2.75e-07!57;CL:0000355!2.75e-07!57;CL:0000183!5.31e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.64e-30!180;CL:0000057!1.56e-25!75;CL:0000048!1.49e-13!430;CL:0000723!6.58e-13!436;CL:0000034!1.57e-12!444;CL:0002371!3.82e-10!591;CL:0000144!1.26e-09!625;CL:0002334!4.32e-09!12;CL:0002320!1.14e-08!365;CL:0000499!3.86e-08!27;CL:0000134!1.27e-07!358;CL:0002620!1.51e-07!23;CL:0000219!2.36e-07!390;CL:0000680!2.75e-07!57;CL:0000056!2.75e-07!57;CL:0000355!2.75e-07!57;CL:0000183!5.31e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000135;2.99e-11;3!CL:0000388;2.99e-11;3!CL:0002195;3.37e-07;2!CL:0002571;3.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.41e-14,76;CL:0000135,2.91e-11,3;CL:0000388,2.91e-11,3;CL:0002195,2.22e-07,2;CL:0002571,2.22e-07,2;CL:0002320,3.36e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.13e-08!375;UBERON:0000914!3.86e-07!83;UBERON:0002329!3.86e-07!83;UBERON:0003077!3.86e-07!83;UBERON:0003059!3.86e-07!83;UBERON:0007282!3.86e-07!83;UBERON:0009618!3.86e-07!83;UBERON:0007285!3.86e-07!83 | |ontology_enrichment_uberon=UBERON:0002384!1.13e-08!375;UBERON:0000914!3.86e-07!83;UBERON:0002329!3.86e-07!83;UBERON:0003077!3.86e-07!83;UBERON:0003059!3.86e-07!83;UBERON:0007282!3.86e-07!83;UBERON:0009618!3.86e-07!83;UBERON:0007285!3.86e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.99e-11;3!UBERON:0000043;2.99e-11;3!UBERON:0007845;2.99e-11;3!UBERON:0005406;8.37e-08;2!UBERON:0001013;1.20e-07;14!UBERON:0003104;1.55e-07;7!UBERON:0009142;1.55e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.91e-11,3;UBERON:0000043,2.91e-11,3;UBERON:0007845,2.91e-11,3;UBERON:0005406,7.14e-08,2;UBERON:0001013,8.31e-08,14;UBERON:0002384,2.49e-07,371 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,2.00146596706261,4.02264984984559,2.61701557230111,0,0,0,0,0,0,0.791300934685361,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.246242116153576,0.204000691244253,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.0843174571537,1.00267582127178,1.01392563272577,0,0.973269740605272,0.0945348171640679,1.10864698731282,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0.397227542439656,2.29469296599051,1.41867352879343,1.68203280042692,1.06748995729705,4.44001587150888,0,0.134710672069688,0.980771418680752,0.605429710579726,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,1.7308685049499,0,0.718618141816238,0.336672227908132,0,0,0.438977620880838,1.5324389789951,0.600952235626387,0.680593098960126,1.07633781413317,1.92201649936711,0,1.80054657650641,0.103052529238439,2.06112432036503,0.18611685633159,0.675105328965065,0.389748020644795,0.504867548488229,0.0920498986422993,0.646584227275248,1.06502877754984,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,1.690605505112,0.797814349754612,0,0,0,0,1.57275793023962,3.7983512377401,0,0.977208552881205,2.84313558994037,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0,7.27898015357825,4.99601168632053,4.25796520591624,0.702848489956279,0,0,0,0,0.184369168541703,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0,0,1.5119514666484,0.496215615637554,1.84154367945675,2.52594084989766,0.512556597022804,0,3.86049410744658,7.42090332224955,0.462629081407967,1.06537035187876,0.164254312027618,0,0.581051892299796,0,0,0,0.34444334449382,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0.460511024178389,0.551346289938122,0.107420244868274,1.16013355131383,0.0852266274161009,1.06838442776085,0,0,0,0,0,6.2962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0,1.33441135746677,0.255897791311334,0,0,0,0.179872457583315,0.823611089208164,0.824686816419805,0,0,0,0,0.243713489631284,0,0.409499734223957,0.565621727814851,0,0,0.66343897524122,0,0,0,0,0,0,0.573645408816206,1.17898849215745,0,0,0,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53733164907686,2.10341978862502,0,0,0.251567901752575,0,0.228840068396924,0.907385542579434,1.08806040407946,0.295710299979268,0.318593534327405,0,0.931577741257556,0.414706207840855,1.32920857278997,0,4.65798587891377,0.380805212168795,0,0.727394636810238,1.07410557042488,0,0.398095888698616,0,1.71697852591396,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,2.46873160583479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67187047233553,4.62175628631418,16.439809360704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,1.21270313374932,0,2.05339980651169,0,0,1.33064142618405,0,0,0,0,16.4248659682418,0,0.406896178315738,0,0,0 | |phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,2.00146596706261,4.02264984984559,2.61701557230111,0,0,0,0,0,0,0.791300934685361,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0.246242116153576,0.204000691244253,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.0843174571537,1.00267582127178,1.01392563272577,0,0.973269740605272,0.0945348171640679,1.10864698731282,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,0.25326102332916,0.397227542439656,2.29469296599051,1.41867352879343,1.68203280042692,1.06748995729705,4.44001587150888,0,0.134710672069688,0.980771418680752,0.605429710579726,1.15235184896,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,1.7308685049499,0,0.718618141816238,0.336672227908132,0,0,0.438977620880838,1.5324389789951,0.600952235626387,0.680593098960126,1.07633781413317,1.92201649936711,0,1.80054657650641,0.103052529238439,2.06112432036503,0.18611685633159,0.675105328965065,0.389748020644795,0.504867548488229,0.0920498986422993,0.646584227275248,1.06502877754984,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,1.690605505112,0.797814349754612,0,0,0,0,1.57275793023962,3.7983512377401,0,0.977208552881205,2.84313558994037,0,0,0,0,0,0,0,1.19812427745791,2.29723871668228,0,0.289562613335158,0.821905290201534,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0,7.27898015357825,4.99601168632053,4.25796520591624,0.702848489956279,0,0,0,0,0.184369168541703,0.260650843404249,0.979005787313703,2.05886054286514,0,0,0,0,0,1.5119514666484,0.496215615637554,1.84154367945675,2.52594084989766,0.512556597022804,0,3.86049410744658,7.42090332224955,0.462629081407967,1.06537035187876,0.164254312027618,0,0.581051892299796,0,0,0,0.34444334449382,0.546273504020151,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0.460511024178389,0.551346289938122,0.107420244868274,1.16013355131383,0.0852266274161009,1.06838442776085,0,0,0,0,0,6.2962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0,1.33441135746677,0.255897791311334,0,0,0,0.179872457583315,0.823611089208164,0.824686816419805,0,0,0,0,0.243713489631284,0,0.409499734223957,0.565621727814851,0,0,0.66343897524122,0,0,0,0,0,0,0.573645408816206,1.17898849215745,0,0,0,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53733164907686,2.10341978862502,0,0,0.251567901752575,0,0.228840068396924,0.907385542579434,1.08806040407946,0.295710299979268,0.318593534327405,0,0.931577741257556,0.414706207840855,1.32920857278997,0,4.65798587891377,0.380805212168795,0,0.727394636810238,1.07410557042488,0,0.398095888698616,0,1.71697852591396,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27201740261367,0,0,2.46873160583479,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67187047233553,4.62175628631418,16.439809360704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,1.21270313374932,0,2.05339980651169,0,0,1.33064142618405,0,0,0,0,16.4248659682418,0,0.406896178315738,0,0,0 | ||
|short_description=p5@AB032018 | |short_description=p5@AB032018 | ||
}} | }} |
Latest revision as of 18:29, 25 July 2015
Short description: | p5@AB032018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AB032018_5end |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | -327bp_to_AB032018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.41e-14 | 76 |
fibrocyte | 2.91e-11 | 3 |
tendon cell | 2.91e-11 | 3 |
hepatic stem cell | 2.22e-07 | 2 |
hepatic mesenchymal stem cell | 2.22e-07 | 2 |
connective tissue cell | 3.36e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.91e-11 | 3 |
tendon | 2.91e-11 | 3 |
regular connective tissue | 2.91e-11 | 3 |
perirenal fat | 7.14e-08 | 2 |
adipose tissue | 8.31e-08 | 14 |
connective tissue | 2.49e-07 | 371 |