FFCP PHASE1:Hg19::chr18:51750948..51751059,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:51750948..51751059,-
|short_description=p1@MBD2
|description=CAGE_peak_1_at_MBD2_5end
|association_with_transcript=98bp_to_ENST00000256429,ENST00000398398...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8932 | |EntrezGene=8932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6917 | |HGNC=6917 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBB5 | |UniProt=Q9UBB5 | ||
|association_with_transcript=98bp_to_ENST00000256429,ENST00000398398,NM_003927,NM_015832,uc002lfg.1,uc002lfh.1_5end | |||
|cluster_id=chr18:51750948..51751059,- | |||
|description=CAGE_peak_1_at_MBD2_5end | |||
|id=chr18:51750948..51751059,- | |||
|ontology_enrichment_celltype=CL:0000738!2.44e-45!140;CL:0002087!1.45e-41!119;CL:0002031!6.60e-38!124;CL:0000037!1.32e-33!172;CL:0000566!1.32e-33!172;CL:0002032!3.74e-33!165;CL:0000837!3.74e-33!165;CL:0000988!2.88e-30!182;CL:0000766!1.18e-26!76;CL:0002057!4.87e-22!42;CL:0002194!6.23e-22!63;CL:0000576!6.23e-22!63;CL:0000040!6.23e-22!63;CL:0000559!6.23e-22!63;CL:0000839!6.61e-22!70;CL:0000557!2.82e-21!71;CL:0000860!4.66e-21!45;CL:0002009!1.20e-20!65;CL:0000134!3.04e-20!358;CL:0002320!3.14e-18!365;CL:0000542!4.31e-17!53;CL:0000051!4.31e-17!53;CL:0000838!1.77e-16!52;CL:0000763!4.12e-16!112;CL:0000049!4.12e-16!112;CL:0000219!3.46e-12!390;CL:0000723!3.80e-12!436;CL:0000063!7.44e-12!578;CL:0000048!7.94e-12!430;CL:0000945!5.87e-11!24;CL:0000826!5.87e-11!24;CL:0000034!3.92e-10!444;CL:0002371!3.67e-08!591;CL:0002393!1.62e-07!9;CL:0002397!1.62e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.98e-15;33!CL:0002057;8.98e-15;33!CL:0000473;4.89e-14;39!CL:0000234;4.89e-14;39!CL:0000576;6.57e-14;48!CL:0000766;1.47e-12;69!CL:0002087;1.56e-12;104!CL:0000945;5.73e-11;24!CL:0000738;4.45e-10;136!CL:0000542;5.73e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.93e-46,136;CL:0002087,8.54e-43,115;CL:0002031,5.66e-39,120;CL:0000037,3.12e-34,168;CL:0002032,8.30e-34,161;CL:0000837,8.30e-34,161;CL:0000988,6.94e-31,177;CL:0000766,5.86e-28,72;CL:0000473,1.26e-23,48;CL:0000234,1.26e-23,48;CL:0002194,3.06e-23,59;CL:0000576,3.06e-23,59;CL:0000040,3.06e-23,59;CL:0000559,3.06e-23,59;CL:0000839,4.53e-23,66;CL:0000557,2.19e-22,67;CL:0000860,4.87e-22,42;CL:0002057,4.87e-22,42;CL:0002009,7.82e-22,61;CL:0000134,3.66e-20,354;CL:0002320,3.81e-18,361;CL:0000542,4.31e-17,53;CL:0000051,4.31e-17,53;CL:0000763,1.31e-16,108;CL:0000049,1.31e-16,108;CL:0000838,1.77e-16,52;CL:0000219,4.23e-12,386;CL:0000723,4.76e-12,433;CL:0000048,9.87e-12,427;CL:0000945,5.87e-11,24;CL:0000826,5.87e-11,24;CL:0000034,4.83e-10,441;CL:0002393,1.62e-07,9;CL:0002397,1.62e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-16;42!CL:0000051;5.73e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.31e-28!102;UBERON:0003061!8.31e-28!102;UBERON:0002193!3.42e-26!112;UBERON:0002371!1.36e-19!80;UBERON:0002384!2.71e-16!375;UBERON:0001474!4.40e-16!86;UBERON:0003081!5.25e-15!216;UBERON:0002405!2.12e-14!115;UBERON:0004765!2.53e-14!101;UBERON:0001434!2.53e-14!101;UBERON:0000178!3.66e-07!15;UBERON:0000179!3.66e-07!15;UBERON:0000463!3.66e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-07;15!UBERON:0000179;3.53e-07;15!UBERON:0000463;3.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.77e-29,98;UBERON:0003061,8.77e-29,98;UBERON:0002193,5.12e-27,108;UBERON:0002405,4.92e-21,93;UBERON:0002371,1.74e-20,76;UBERON:0001474,9.45e-17,82;UBERON:0003081,1.44e-16,203;UBERON:0002384,3.32e-16,371;UBERON:0004765,9.43e-15,90;UBERON:0001434,1.78e-13,100;UBERON:0000926,3.83e-10,315;UBERON:0004120,3.83e-10,315;UBERON:0006603,3.83e-10,315;UBERON:0000178,3.66e-07,15;UBERON:0000179,3.66e-07,15;UBERON:0000463,3.66e-07,15 | |||
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| ||
|short_description=p1@MBD2 | |||
}} | }} |
Latest revision as of 19:41, 19 September 2015
Short description: | p1@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000256429, ENST00000398398, NM_003927, NM_015832, uc002lfg.1, uc002lfh.1_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q9UBB5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.77e-29 | 98 |
blood island | 8.77e-29 | 98 |
hemolymphoid system | 5.12e-27 | 108 |
immune system | 4.92e-21 | 93 |
bone marrow | 1.74e-20 | 76 |
bone element | 9.45e-17 | 82 |
lateral plate mesoderm | 1.44e-16 | 203 |
connective tissue | 3.32e-16 | 371 |
skeletal element | 9.43e-15 | 90 |
skeletal system | 1.78e-13 | 100 |
mesoderm | 3.83e-10 | 315 |
mesoderm-derived structure | 3.83e-10 | 315 |
presumptive mesoderm | 3.83e-10 | 315 |
blood | 3.66e-07 | 15 |
haemolymphatic fluid | 3.66e-07 | 15 |
organism substance | 3.66e-07 | 15 |