FFCP PHASE1:Hg19::chr17:42392549..42392560,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10900 | |EntrezGene=10900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16984 | |HGNC=16984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-323bp_to_BC013240_5end | |association_with_transcript=-323bp_to_BC013240_5end | ||
|cluster_id=chr17:42392549..42392560,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_5_at_RUNDC3A_5end | |description=CAGE_peak_5_at_RUNDC3A_5end | ||
|id=chr17:42392549..42392560,+ | |id=chr17:42392549..42392560,+ | ||
|ontology_enrichment_celltype=CL:0002149!8.40e-07!6;CL:0002255!8.40e-07!6 | |ontology_enrichment_celltype=CL:0002149!8.40e-07!6;CL:0002255!8.40e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3001!8.40e-07!6 | |ontology_enrichment_disease=DOID:3001!8.40e-07!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.32e-19!115;UBERON:0001869!1.32e-11!32;UBERON:0002619!1.70e-11!22;UBERON:0001049!1.85e-11!57;UBERON:0005068!1.85e-11!57;UBERON:0006241!1.85e-11!57;UBERON:0007135!1.85e-11!57;UBERON:0001017!3.72e-11!82;UBERON:0002616!6.65e-11!59;UBERON:0002020!7.60e-11!34;UBERON:0003528!7.60e-11!34;UBERON:0001950!9.72e-11!20;UBERON:0001893!9.72e-11!34;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0005743!2.35e-10!86;UBERON:0000178!2.71e-10!15;UBERON:0000179!2.71e-10!15;UBERON:0000463!2.71e-10!15;UBERON:0001871!7.27e-10!7;UBERON:0000956!7.37e-10!25;UBERON:0000203!7.37e-10!25;UBERON:0000073!9.93e-10!94;UBERON:0001016!9.93e-10!94;UBERON:0002780!1.25e-09!41;UBERON:0001890!1.25e-09!41;UBERON:0006240!1.25e-09!41;UBERON:0002791!1.32e-09!33;UBERON:0003080!2.56e-09!42;UBERON:0000200!3.05e-09!6;UBERON:0000349!1.52e-07!5;UBERON:0002771!1.82e-07!3;UBERON:0003075!9.83e-07!86;UBERON:0007284!9.83e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.32e-19!115;UBERON:0001869!1.32e-11!32;UBERON:0002619!1.70e-11!22;UBERON:0001049!1.85e-11!57;UBERON:0005068!1.85e-11!57;UBERON:0006241!1.85e-11!57;UBERON:0007135!1.85e-11!57;UBERON:0001017!3.72e-11!82;UBERON:0002616!6.65e-11!59;UBERON:0002020!7.60e-11!34;UBERON:0003528!7.60e-11!34;UBERON:0001950!9.72e-11!20;UBERON:0001893!9.72e-11!34;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0005743!2.35e-10!86;UBERON:0000178!2.71e-10!15;UBERON:0000179!2.71e-10!15;UBERON:0000463!2.71e-10!15;UBERON:0001871!7.27e-10!7;UBERON:0000956!7.37e-10!25;UBERON:0000203!7.37e-10!25;UBERON:0000073!9.93e-10!94;UBERON:0001016!9.93e-10!94;UBERON:0002780!1.25e-09!41;UBERON:0001890!1.25e-09!41;UBERON:0006240!1.25e-09!41;UBERON:0002791!1.32e-09!33;UBERON:0003080!2.56e-09!42;UBERON:0000200!3.05e-09!6;UBERON:0000349!1.52e-07!5;UBERON:0002771!1.82e-07!3;UBERON:0003075!9.83e-07!86;UBERON:0007284!9.83e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.65e-58;15!UBERON:0000179;3.65e-58;15!UBERON:0000463;3.65e-58;15!UBERON:0002390;1.21e-24;32!UBERON:0002193;1.53e-16;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-58,15;UBERON:0000179,3.35e-58,15;UBERON:0000463,3.35e-58,15;UBERON:0007023,2.60e-12,114;UBERON:0002390,1.31e-08,98;UBERON:0003061,1.31e-08,98;UBERON:0004535,8.78e-08,109;UBERON:0002193,8.78e-08,108;UBERON:0001009,1.46e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0.482022059766964,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,21.0489481580097,21.4377069840418,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,3.82318603571188,2.27858874869665,0.238231775457789,1.64544909234478,0,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,1.35291077473043,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0.709036767709349,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.305966489225945,0,0.459474497674225,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0.482022059766964,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,21.0489481580097,21.4377069840418,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,3.82318603571188,2.27858874869665,0.238231775457789,1.64544909234478,0,2.70015718619057,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,1.35291077473043,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0,0.709036767709349,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.305966489225945,0,0.459474497674225,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@RUNDC3A | |short_description=p5@RUNDC3A | ||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p5@RUNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RUNDC3A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -323bp_to_BC013240_5end |
EntrezGene: | RUNDC3A |
HGNC: | 16984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-58 | 15 |
haemolymphatic fluid | 3.35e-58 | 15 |
organism substance | 3.35e-58 | 15 |
adult organism | 2.60e-12 | 114 |
hematopoietic system | 1.31e-08 | 98 |
blood island | 1.31e-08 | 98 |
cardiovascular system | 8.78e-08 | 109 |
hemolymphoid system | 8.78e-08 | 108 |
circulatory system | 1.46e-07 | 112 |