FFCP PHASE1:Hg19::chr17:40556364..40556401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:40556364..40556401,- | |||
|coexpression_cluster_id=C1434 | |coexpression_cluster_id=C1434 | ||
|description=CAGE_peak_at_chr17:40556364..40556401,- | |description=CAGE_peak_at_chr17:40556364..40556401,- | ||
|id=chr17:40556364..40556401,- | |id=chr17:40556364..40556401,- | ||
|ontology_enrichment_celltype=CL:0000055!1.17e-26!180;CL:0000222!8.66e-22!119;CL:0000057!6.24e-18!75;CL:0000220!7.14e-16!246;CL:0002321!1.21e-15!248;CL:0000183!4.04e-14!59;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000187!2.87e-13!54;CL:0000192!6.33e-12!42;CL:0000514!6.33e-12!42;CL:0000393!2.28e-11!60;CL:0000211!2.28e-11!60;CL:0000359!2.92e-10!32;CL:0000144!5.85e-09!625;CL:0000213!6.37e-09!57;CL:0000215!6.37e-09!57;CL:0002371!7.56e-09!591;CL:0002620!2.38e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.17e-26!180;CL:0000222!8.66e-22!119;CL:0000057!6.24e-18!75;CL:0000220!7.14e-16!246;CL:0002321!1.21e-15!248;CL:0000183!4.04e-14!59;CL:0000680!4.11e-14!57;CL:0000056!4.11e-14!57;CL:0000355!4.11e-14!57;CL:0000187!2.87e-13!54;CL:0000192!6.33e-12!42;CL:0000514!6.33e-12!42;CL:0000393!2.28e-11!60;CL:0000211!2.28e-11!60;CL:0000359!2.92e-10!32;CL:0000144!5.85e-09!625;CL:0000213!6.37e-09!57;CL:0000215!6.37e-09!57;CL:0002371!7.56e-09!591;CL:0002620!2.38e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.04e-11;32!CL:0000192;2.95e-10;43!CL:0000187;8.93e-09;55!CL:0002620;2.30e-07;23!CL:0000393;2.86e-07;61!CL:0000211;2.86e-07;61!CL:0002320;3.74e-07;188!CL:0002334;4.59e-07;12!CL:0000115;4.70e-07;36!CL:0000057;6.71e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.86e-24,121;CL:0000057,1.96e-17,76;CL:0000680,1.37e-16,58;CL:0000056,1.37e-16,58;CL:0000355,1.37e-16,58;CL:0000187,4.55e-16,55;CL:0000192,4.91e-14,43;CL:0000514,4.91e-14,43;CL:0002321,2.28e-13,250;CL:0000393,3.13e-13,61;CL:0000211,3.13e-13,61;CL:0000359,1.09e-11,32;CL:0000213,1.72e-09,58;CL:0000215,1.72e-09,58;CL:0002620,1.48e-07,23;CL:0000115,4.27e-07,36;CL:0002334,7.16e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.95e-10;43!CL:0000355;5.12e-08;58!CL:0000222;3.17e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.48e-19!79;UBERON:0007798!2.48e-19!79;UBERON:0004872!8.26e-19!84;UBERON:0000055!4.74e-18!69;UBERON:0000914!1.47e-17!83;UBERON:0002329!1.47e-17!83;UBERON:0003077!1.47e-17!83;UBERON:0003059!1.47e-17!83;UBERON:0007282!1.47e-17!83;UBERON:0009618!1.47e-17!83;UBERON:0007285!1.47e-17!83;UBERON:0001981!2.70e-17!60;UBERON:0007500!2.70e-17!60;UBERON:0004537!2.70e-17!60;UBERON:0006965!2.70e-17!60;UBERON:0000486!1.00e-16!82;UBERON:0005256!1.86e-16!143;UBERON:0004290!2.12e-15!70;UBERON:0001637!1.84e-14!42;UBERON:0003509!1.84e-14!42;UBERON:0004572!1.84e-14!42;UBERON:0002385!5.15e-14!63;UBERON:0001015!5.15e-14!63;UBERON:0000383!5.15e-14!63;UBERON:0001134!1.34e-13!61;UBERON:0002036!1.34e-13!61;UBERON:0003082!1.34e-13!61;UBERON:0003914!1.42e-13!118;UBERON:0000490!4.36e-13!138;UBERON:0000468!7.11e-13!659;UBERON:0002100!9.09e-13!216;UBERON:0004535!1.77e-12!110;UBERON:0001009!2.43e-12!113;UBERON:0000119!1.56e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0003102!2.27e-11!95;UBERON:0003104!2.52e-11!238;UBERON:0009142!2.52e-11!238;UBERON:0000475!3.84e-11!365;UBERON:0000477!4.30e-11!286;UBERON:0004573!4.32e-11!33;UBERON:0004571!4.32e-11!33;UBERON:0000481!5.18e-11!347;UBERON:0000467!3.90e-10!625;UBERON:0000480!4.28e-10!626;UBERON:0000926!4.62e-09!448;UBERON:0004120!4.62e-09!448;UBERON:0006603!4.62e-09!448;UBERON:0004111!1.34e-07!241;UBERON:0002199!1.52e-07!45;UBERON:0002416!1.52e-07!45 | |ontology_enrichment_uberon=UBERON:0002049!2.48e-19!79;UBERON:0007798!2.48e-19!79;UBERON:0004872!8.26e-19!84;UBERON:0000055!4.74e-18!69;UBERON:0000914!1.47e-17!83;UBERON:0002329!1.47e-17!83;UBERON:0003077!1.47e-17!83;UBERON:0003059!1.47e-17!83;UBERON:0007282!1.47e-17!83;UBERON:0009618!1.47e-17!83;UBERON:0007285!1.47e-17!83;UBERON:0001981!2.70e-17!60;UBERON:0007500!2.70e-17!60;UBERON:0004537!2.70e-17!60;UBERON:0006965!2.70e-17!60;UBERON:0000486!1.00e-16!82;UBERON:0005256!1.86e-16!143;UBERON:0004290!2.12e-15!70;UBERON:0001637!1.84e-14!42;UBERON:0003509!1.84e-14!42;UBERON:0004572!1.84e-14!42;UBERON:0002385!5.15e-14!63;UBERON:0001015!5.15e-14!63;UBERON:0000383!5.15e-14!63;UBERON:0001134!1.34e-13!61;UBERON:0002036!1.34e-13!61;UBERON:0003082!1.34e-13!61;UBERON:0003914!1.42e-13!118;UBERON:0000490!4.36e-13!138;UBERON:0000468!7.11e-13!659;UBERON:0002100!9.09e-13!216;UBERON:0004535!1.77e-12!110;UBERON:0001009!2.43e-12!113;UBERON:0000119!1.56e-11!312;UBERON:0000483!2.26e-11!309;UBERON:0003102!2.27e-11!95;UBERON:0003104!2.52e-11!238;UBERON:0009142!2.52e-11!238;UBERON:0000475!3.84e-11!365;UBERON:0000477!4.30e-11!286;UBERON:0004573!4.32e-11!33;UBERON:0004571!4.32e-11!33;UBERON:0000481!5.18e-11!347;UBERON:0000467!3.90e-10!625;UBERON:0000480!4.28e-10!626;UBERON:0000926!4.62e-09!448;UBERON:0004120!4.62e-09!448;UBERON:0006603!4.62e-09!448;UBERON:0004111!1.34e-07!241;UBERON:0002199!1.52e-07!45;UBERON:0002416!1.52e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.47e-12;42!UBERON:0003509;1.47e-12;42!UBERON:0004572;1.47e-12;42!UBERON:0004573;3.25e-12;33!UBERON:0004571;3.25e-12;33!UBERON:0007500;1.31e-10;56!UBERON:0001981;1.31e-10;56!UBERON:0004537;1.31e-10;56!UBERON:0000055;2.03e-09;65!UBERON:0002049;2.09e-08;75!UBERON:0007798;2.09e-08;75!UBERON:0000947;2.14e-07;21!UBERON:0010191;2.14e-07;21!UBERON:0003914;3.96e-07;74!UBERON:0001013;4.28e-07;14 | |||
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|phase1_expression=2.54349730978779,5.99481466894753,3.24195129420734,5.00366491765652,6.70441641640932,12.2127393374052,17.7309914717817,5.68547886084148,1.56711376919903,0.982935746006035,4.18680700783456,0.873765488520689,1.31883489114227,4.33182235360163,4.63956326019082,2.01697543935533,5.42425075221579,2.92124036154949,3.90346239032406,1.72369481307503,5.50801866359483,4.07491137921514,1.14494394852423,2.05311637609326,1.63205431473244,0,0,0,0,0,0,1.83884244895785,2.10844143144775,2.9580320813343,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,1.79007586580942,3.61439152384566,5.51471701699479,7.9665585428453,2.3858578411533,5.83961844363163,1.51255707462509,5.76496433402666,1.75669571386252,0.589405839739707,1.45718115317017,1.85392221392215,0,0,0,0,0,0,2.38514888840046,4.30117297553062,2.08284300964557,1.13061588384802,1.25849830862972,9.35401342596229,2.08994966536811,1.29208379584664,1.06729878806013,0.33472061276467,3.22263453687318,0,9.27435818683044,1.83831540172934,3.24056779152704,2.05389375053383,0.673588117878509,0.563057402416611,3.06633274931766,4.74632829784064,3.66403487860815,0,0,3.05265836499774,2.48485975847659,7.85109172320394,1.98613771219828,4.30254931123221,2.4826786753885,6.72813120170769,2.1349799145941,8.14002909776628,0.622422070799533,2.15537075311501,1.9615428373615,0.605429710579726,2.30470369792,0.937285727335186,2.80944069147288,0.570471821544449,6.27684458317565,1.87895197830024,3.56120477609889,2.80901613404497,0.816616685019573,4.29920110591188,1.65321249881225,4.75201142912821,3.95627086845691,0.910161361938026,5.03032699271367,1.5150250255866,2.50237039743928,0.554128230968366,3.5118209670467,7.35570709917647,3.15499923703853,3.97012641060074,6.09924761342131,2.98980344345994,1.27159140695737,3.30100205692843,3.50378599410692,5.41045134095821,2.97786970130544,0.675105328965065,4.87185025805993,5.3011092591264,2.85354685791128,2.26304479546337,3.55009592516614,5.44061330429257,3.39121184620975,3.09217365061275,2.45471508531751,0.286804595389004,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0,0,11.5783368874719,5.52539685409922,8.35862270457562,16.6032280784005,2.48444280083672,1.34867752062481,1.68707720918437,2.86764329104224,1.52515610864684,2.37270619111097,0.808987848960987,0.784885860501384,2.69323009862473,4.42893272774789,5.60967095213783,2.057870056657,1.47008711385542,0,0,0,0,0.491953754172454,1.3725424823882,2.30475599358114,0,1.10581869652794,1.11106134190236,0.977424915930974,2.07986957055916,5.77325368101093,0.695582429850461,0.70445216541493,3.03169540298255,3.70388410061289,3.23432058798817,0,0,0,0.468008530278475,0,0,4.19955320497149,1.84307626415102,1.34337784054272,0.290633938513962,1.15014803749563,0,0.176096868026452,0.414656231081544,0.432359860250884,0.50496973370552,0.126995788584338,0.763976851116555,0,1.71072446022705,1.43958489784653,0.300343057843917,0,0.560655421726804,1.30788020649984,1.3200891447771,0.258543431515556,0,5.917119267892,2.12750493267896,2.08014873822732,3.08648849114571,4.25547396069835,3.99633268524149,1.00084595560703,2.17048642156577,2.46972101034231,3.90883421152482,1.06617584622764,3.95975936466715,1.50719688529793,4.35766729300147,2.99918973546171,0,0,0,2.87549826589899,4.59447743336456,0,4.1986578933598,6.98619496671304,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,2.4538298343828,4.00136416847742,4.6115054028955,6.44709670745502,16.2370379805417,5.36188211115378,3.63138386477411,5.11608369537122,0,4.1389228517002,2.65690239414175,2.58116835958384,4.08352987999989,1.56640925970192,2.05886054286514,0,0,0,4.85004114314015,3.32870879020994,2.41912234663744,2.23297027036899,1.53461973288062,5.3325417942284,2.43464383585832,2.04682899626681,6.27330292460069,8.90508398669946,5.39733928309294,4.6166048581413,2.38168752440047,6.23105315020345,9.64546141217662,1.20859449591622,8.22076528243468,1.74953878978203,2.18147451512753,9.10455840033585,7.73634048260602,0.451199612907412,0.847168708148562,1.56869953835371,0,0.105551628892876,7.96133688496276,4.25234263191289,3.45465465763423,4.62681758070868,1.08378575017541,2.50844886927427,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0.256450125116389,0.328014645699706,1.30151357865721,1.03041011647722,0.183138929636687,0.082509499920588,0.574265537996172,2.60024098414608,3.21367859688319,2.70678011217942,3.69716681075147,3.07007349452259,2.20538515975249,2.79292636657511,3.77043404176994,2.47157219506693,2.58192903375538,2.80984356113663,2.49847087574638,0.638063562472921,0.809262246844399,10.6914476338376,5.98143458978216,0,3.08033580176089,1.06461206063404,1.73986598415015,2.22389062924704,2.43312307461385,1.48863347743867,1.58189712359363,1.14378116354295,2.81487570442467,2.99557291623744,3.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| ||
|short_description=p@chr17:40556364..40556401,- | |short_description=p@chr17:40556364..40556401,- | ||
}} | }} |
Latest revision as of 17:00, 25 July 2015
Short description: | p@chr17:40556364..40556401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40556364..40556401, - |
Coexpression cluster: | C1434_Olfactory_leiomyoma_Adipocyte_Hair_tenocyte_Preadipocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.86e-24 | 121 |
fibroblast | 1.96e-17 | 76 |
muscle precursor cell | 1.37e-16 | 58 |
myoblast | 1.37e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.37e-16 | 58 |
muscle cell | 4.55e-16 | 55 |
smooth muscle cell | 4.91e-14 | 43 |
smooth muscle myoblast | 4.91e-14 | 43 |
embryonic cell | 2.28e-13 | 250 |
electrically responsive cell | 3.13e-13 | 61 |
electrically active cell | 3.13e-13 | 61 |
vascular associated smooth muscle cell | 1.09e-11 | 32 |
lining cell | 1.72e-09 | 58 |
barrier cell | 1.72e-09 | 58 |
skin fibroblast | 1.48e-07 | 23 |
endothelial cell | 4.27e-07 | 36 |
preadipocyte | 7.16e-07 | 12 |