FFCP PHASE1:Hg19::chr17:40330896..40330912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:40330896..40330912,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr17:40330896..40330912,- | |description=CAGE_peak_at_chr17:40330896..40330912,- | ||
|id=chr17:40330896..40330912,- | |id=chr17:40330896..40330912,- | ||
|ontology_enrichment_celltype=CL:0000738!3.99e-36!140;CL:0000988!2.81e-34!182;CL:0000037!1.20e-31!172;CL:0000566!1.20e-31!172;CL:0002032!3.64e-30!165;CL:0000837!3.64e-30!165;CL:0002087!2.83e-26!119;CL:0002031!1.18e-24!124;CL:0000766!9.22e-22!76;CL:0002057!6.97e-21!42;CL:0000094!1.47e-19!8;CL:0000860!3.71e-19!45;CL:0000081!4.24e-18!11;CL:0000763!1.75e-17!112;CL:0000049!1.75e-17!112;CL:0000080!1.63e-13!6;CL:0002009!5.72e-13!65;CL:0000557!8.86e-13!71;CL:0000838!2.15e-12!52;CL:0000542!4.41e-12!53;CL:0000051!4.41e-12!53;CL:0002194!4.96e-12!63;CL:0000576!4.96e-12!63;CL:0000040!4.96e-12!63;CL:0000559!4.96e-12!63;CL:0000839!1.25e-11!70;CL:0000134!6.05e-11!358;CL:0000775!9.06e-11!3;CL:0002320!1.69e-10!365;CL:0000623!3.26e-10!3;CL:0000825!3.26e-10!3;CL:0000219!1.46e-09!390;CL:0000034!7.71e-09!444;CL:0000771!6.90e-08!2;CL:0000048!1.17e-07!430;CL:0000723!2.19e-07!436 | |ontology_enrichment_celltype=CL:0000738!3.99e-36!140;CL:0000988!2.81e-34!182;CL:0000037!1.20e-31!172;CL:0000566!1.20e-31!172;CL:0002032!3.64e-30!165;CL:0000837!3.64e-30!165;CL:0002087!2.83e-26!119;CL:0002031!1.18e-24!124;CL:0000766!9.22e-22!76;CL:0002057!6.97e-21!42;CL:0000094!1.47e-19!8;CL:0000860!3.71e-19!45;CL:0000081!4.24e-18!11;CL:0000763!1.75e-17!112;CL:0000049!1.75e-17!112;CL:0000080!1.63e-13!6;CL:0002009!5.72e-13!65;CL:0000557!8.86e-13!71;CL:0000838!2.15e-12!52;CL:0000542!4.41e-12!53;CL:0000051!4.41e-12!53;CL:0002194!4.96e-12!63;CL:0000576!4.96e-12!63;CL:0000040!4.96e-12!63;CL:0000559!4.96e-12!63;CL:0000839!1.25e-11!70;CL:0000134!6.05e-11!358;CL:0000775!9.06e-11!3;CL:0002320!1.69e-10!365;CL:0000623!3.26e-10!3;CL:0000825!3.26e-10!3;CL:0000219!1.46e-09!390;CL:0000034!7.71e-09!444;CL:0000771!6.90e-08!2;CL:0000048!1.17e-07!430;CL:0000723!2.19e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000094;3.39e-45;8!CL:0000081;3.24e-44;11!CL:0000775;5.42e-31;3!CL:0000771;9.13e-22;2!CL:0000623;4.42e-14;3!CL:0002393;1.74e-07;6!CL:0002397;1.74e-07;6!CL:0000766;3.64e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.11e-45,8;CL:0000081,3.05e-44,11;CL:0000775,5.44e-31,3;CL:0000771,9.15e-22,2;CL:0000988,1.22e-15,177;CL:0000766,5.96e-15,72;CL:0000738,4.45e-14,136;CL:0000623,8.57e-14,3;CL:0000825,8.57e-14,3;CL:0002032,1.52e-11,161;CL:0000837,1.52e-11,161;CL:0000037,5.73e-11,168;CL:0000763,1.80e-09,108;CL:0000049,1.80e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.28e-15!102;UBERON:0003061!2.28e-15!102;UBERON:0002193!1.62e-14!112;UBERON:0002371!8.79e-11!80;UBERON:0002384!6.80e-10!375;UBERON:0001474!1.09e-09!86;UBERON:0002405!2.95e-09!115;UBERON:0004765!1.51e-07!101;UBERON:0001434!1.51e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!2.28e-15!102;UBERON:0003061!2.28e-15!102;UBERON:0002193!1.62e-14!112;UBERON:0002371!8.79e-11!80;UBERON:0002384!6.80e-10!375;UBERON:0001474!1.09e-09!86;UBERON:0002405!2.95e-09!115;UBERON:0004765!1.51e-07!101;UBERON:0001434!1.51e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.04e-09;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.56e-10,10;UBERON:0000358,9.56e-10,10;UBERON:0000307,9.56e-10,10;UBERON:0000091,9.56e-10,10;UBERON:0000087,9.56e-10,10;UBERON:0007010,9.56e-10,10;UBERON:0007806,9.56e-10,10;UBERON:0008780,9.56e-10,10;UBERON:0005728,9.56e-10,10 | |||
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| ||
|short_description=p@chr17:40330896..40330912,- | |short_description=p@chr17:40330896..40330912,- | ||
}} | }} |
Latest revision as of 16:57, 25 July 2015
Short description: | p@chr17:40330896..40330912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:40330896..40330912, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.11e-45 | 8 |
blood cell | 3.05e-44 | 11 |
neutrophil | 5.44e-31 | 3 |
eosinophil | 9.15e-22 | 2 |
hematopoietic cell | 1.22e-15 | 177 |
myeloid leukocyte | 5.96e-15 | 72 |
leukocyte | 4.45e-14 | 136 |
natural killer cell | 8.57e-14 | 3 |
pro-NK cell | 8.57e-14 | 3 |
hematopoietic oligopotent progenitor cell | 1.52e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-11 | 161 |
hematopoietic stem cell | 5.73e-11 | 168 |
myeloid cell | 1.80e-09 | 108 |
common myeloid progenitor | 1.80e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.56e-10 | 10 |
blastocyst | 9.56e-10 | 10 |
blastula | 9.56e-10 | 10 |
bilaminar disc | 9.56e-10 | 10 |
inner cell mass | 9.56e-10 | 10 |
cleaving embryo | 9.56e-10 | 10 |
connecting stalk | 9.56e-10 | 10 |
inner cell mass derived epiblast | 9.56e-10 | 10 |
extraembryonic mesoderm | 9.56e-10 | 10 |