FFCP PHASE1:Hg19::chr17:39775781..39775811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39775781..39775811,- | |||
|coexpression_cluster_id=C544 | |coexpression_cluster_id=C544 | ||
|description=CAGE_peak_at_chr17:39775781..39775811,- | |description=CAGE_peak_at_chr17:39775781..39775811,- | ||
|id=chr17:39775781..39775811,- | |id=chr17:39775781..39775811,- | ||
|ontology_enrichment_celltype=CL:0002076!7.21e-25!43;CL:0000066!1.82e-22!254;CL:0000223!1.61e-17!59;CL:0002368!4.25e-16!13;CL:0002251!1.65e-13!21;CL:0002159!3.01e-12!13;CL:0000244!2.93e-09!4;CL:0000731!2.93e-09!4;CL:0002202!1.03e-08!9;CL:0002632!1.03e-08!9;CL:0002328!1.20e-07!3;CL:0000068!1.40e-07!3;CL:0000069!1.40e-07!3;CL:0000307!1.40e-07!3;CL:0000377!1.40e-07!3;CL:0000622!3.54e-07!5;CL:0002621!5.49e-07!3;CL:0000362!5.85e-07!8 | |ontology_enrichment_celltype=CL:0002076!7.21e-25!43;CL:0000066!1.82e-22!254;CL:0000223!1.61e-17!59;CL:0002368!4.25e-16!13;CL:0002251!1.65e-13!21;CL:0002159!3.01e-12!13;CL:0000244!2.93e-09!4;CL:0000731!2.93e-09!4;CL:0002202!1.03e-08!9;CL:0002632!1.03e-08!9;CL:0002328!1.20e-07!3;CL:0000068!1.40e-07!3;CL:0000069!1.40e-07!3;CL:0000307!1.40e-07!3;CL:0000377!1.40e-07!3;CL:0000622!3.54e-07!5;CL:0002621!5.49e-07!3;CL:0000362!5.85e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.97e-32;13!CL:0002076;2.75e-21;42!CL:0002159;1.78e-18;14!CL:0002202;4.05e-17;9!CL:0002632;4.05e-17;9!CL:0002328;5.72e-14;3!CL:0000307;9.05e-14;3!CL:0000240;5.21e-12;6!CL:0000311;5.21e-12;6!CL:0000079;5.21e-12;6!CL:0000237;5.21e-12;6!CL:0000362;6.36e-12;9!CL:0000244;8.89e-11;4!CL:0000731;8.89e-11;4!CL:0002077;1.07e-09;34!CL:0000575;1.17e-09;2!CL:0000317;3.81e-09;2!CL:1000448;3.81e-09;2!CL:0002308;3.81e-09;2!CL:0002140;3.81e-09;2!CL:0000312;9.85e-09;5!CL:0000622;3.86e-08;5!CL:0002231;2.89e-07;3!CL:0000154;7.49e-07;6!CL:0002577;8.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.83e-32,13;CL:0002076,2.38e-26,42;CL:0000066,4.30e-19,253;CL:0002159,2.38e-18,14;CL:0000223,5.83e-18,58;CL:0002202,4.48e-17,9;CL:0002632,4.48e-17,9;CL:0002328,6.68e-14,3;CL:0000068,9.07e-14,3;CL:0000069,9.07e-14,3;CL:0000307,9.07e-14,3;CL:0000377,9.07e-14,3;CL:0000240,4.72e-12,6;CL:0000311,4.72e-12,6;CL:0000079,4.72e-12,6;CL:0000237,4.72e-12,6;CL:0000036,4.72e-12,6;CL:0000357,4.72e-12,6;CL:0000114,4.72e-12,6;CL:0000362,6.22e-12,9;CL:0000244,8.47e-11,4;CL:0000731,8.47e-11,4;CL:0002077,1.08e-10,34;CL:0000575,1.55e-09,2;CL:0000317,3.36e-09,2;CL:1000448,3.36e-09,2;CL:0002308,3.36e-09,2;CL:0002140,3.36e-09,2;CL:0000312,1.04e-08,5;CL:0000622,3.72e-08,5;CL:0002231,2.94e-07,3;CL:0002321,4.73e-07,250;CL:0000154,7.27e-07,6;CL:0002577,9.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.05e-14;3!CL:0000357;5.21e-12;6!CL:0000114;5.21e-12;6!CL:0000223;8.93e-11;58 | |||
|ontology_enrichment_disease=DOID:1749!9.35e-10!14;DOID:305!7.88e-07!106 | |ontology_enrichment_disease=DOID:1749!9.35e-10!14;DOID:305!7.88e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.74e-27!72;UBERON:0004119!9.07e-22!169;UBERON:0000925!9.07e-22!169;UBERON:0006595!9.07e-22!169;UBERON:0000065!3.16e-21!53;UBERON:0001557!2.31e-19!19;UBERON:0000072!2.93e-17!46;UBERON:0001737!1.44e-16!9;UBERON:0001007!9.58e-14!155;UBERON:0001555!9.58e-14!155;UBERON:0007026!9.58e-14!155;UBERON:0000161!1.04e-13!35;UBERON:0000166!5.24e-13!21;UBERON:0000077!5.87e-13!130;UBERON:0008947!9.52e-12!38;UBERON:0003258!9.52e-12!38;UBERON:0001041!2.22e-11!98;UBERON:0004921!4.30e-11!129;UBERON:0004185!4.30e-11!129;UBERON:0000165!1.20e-10!28;UBERON:0000930!1.20e-10!28;UBERON:0000365!1.24e-10!5;UBERON:0005631!2.31e-10!14;UBERON:0000158!2.31e-10!14;UBERON:0000064!4.86e-10!219;UBERON:0003729!1.10e-09!5;UBERON:0003102!3.00e-09!95;UBERON:0005910!8.91e-09!6;UBERON:0000062!2.20e-08!511;UBERON:0003343!8.13e-08!4;UBERON:0004785!8.13e-08!4;UBERON:0004815!1.20e-07!3;UBERON:0002031!1.20e-07!3;UBERON:0006562!1.99e-07!11;UBERON:0000467!2.01e-07!625;UBERON:0000480!2.24e-07!626;UBERON:0003124!2.98e-07!7;UBERON:0007196!5.21e-07!14;UBERON:0001558!5.21e-07!14;UBERON:0001949!5.49e-07!3;UBERON:0000923!7.22e-07!604;UBERON:0005291!7.22e-07!604;UBERON:0006598!7.22e-07!604;UBERON:0002532!7.22e-07!604;UBERON:0001444!8.03e-07!48;UBERON:0002050!8.04e-07!605;UBERON:0005423!8.04e-07!605;UBERON:0001723!8.25e-07!3;UBERON:0001033!8.25e-07!3;UBERON:0010056!8.25e-07!3;UBERON:0000344!8.85e-07!12 | |ontology_enrichment_uberon=UBERON:0001004!4.74e-27!72;UBERON:0004119!9.07e-22!169;UBERON:0000925!9.07e-22!169;UBERON:0006595!9.07e-22!169;UBERON:0000065!3.16e-21!53;UBERON:0001557!2.31e-19!19;UBERON:0000072!2.93e-17!46;UBERON:0001737!1.44e-16!9;UBERON:0001007!9.58e-14!155;UBERON:0001555!9.58e-14!155;UBERON:0007026!9.58e-14!155;UBERON:0000161!1.04e-13!35;UBERON:0000166!5.24e-13!21;UBERON:0000077!5.87e-13!130;UBERON:0008947!9.52e-12!38;UBERON:0003258!9.52e-12!38;UBERON:0001041!2.22e-11!98;UBERON:0004921!4.30e-11!129;UBERON:0004185!4.30e-11!129;UBERON:0000165!1.20e-10!28;UBERON:0000930!1.20e-10!28;UBERON:0000365!1.24e-10!5;UBERON:0005631!2.31e-10!14;UBERON:0000158!2.31e-10!14;UBERON:0000064!4.86e-10!219;UBERON:0003729!1.10e-09!5;UBERON:0003102!3.00e-09!95;UBERON:0005910!8.91e-09!6;UBERON:0000062!2.20e-08!511;UBERON:0003343!8.13e-08!4;UBERON:0004785!8.13e-08!4;UBERON:0004815!1.20e-07!3;UBERON:0002031!1.20e-07!3;UBERON:0006562!1.99e-07!11;UBERON:0000467!2.01e-07!625;UBERON:0000480!2.24e-07!626;UBERON:0003124!2.98e-07!7;UBERON:0007196!5.21e-07!14;UBERON:0001558!5.21e-07!14;UBERON:0001949!5.49e-07!3;UBERON:0000923!7.22e-07!604;UBERON:0005291!7.22e-07!604;UBERON:0006598!7.22e-07!604;UBERON:0002532!7.22e-07!604;UBERON:0001444!8.03e-07!48;UBERON:0002050!8.04e-07!605;UBERON:0005423!8.04e-07!605;UBERON:0001723!8.25e-07!3;UBERON:0001033!8.25e-07!3;UBERON:0010056!8.25e-07!3;UBERON:0000344!8.85e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.72e-14;3!UBERON:0002031;5.72e-14;3!UBERON:0007196;2.41e-13;15!UBERON:0001558;2.41e-13;15!UBERON:0000065;9.57e-12;44!UBERON:0003126;4.95e-10;7!UBERON:0001005;4.95e-10;7!UBERON:0002419;3.81e-09;2!UBERON:0007771;3.81e-09;2!UBERON:0003297;3.81e-09;2!UBERON:0001821;3.81e-09;2!UBERON:0003487;3.81e-09;2!UBERON:0001820;3.81e-09;2!UBERON:0000486;7.50e-09;12!UBERON:0000072;1.05e-08;37!UBERON:0000365;1.05e-08;5!UBERON:0002185;1.47e-08;5!UBERON:0005178;5.58e-08;34!UBERON:0002224;5.58e-08;34!UBERON:0005911;8.49e-08;36!UBERON:0005181;1.50e-07;35!UBERON:0005910;2.57e-07;6!UBERON:0001003;4.92e-07;15!UBERON:0007376;4.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.26e-14,54;UBERON:0001004,1.27e-14,74;UBERON:0004815,6.68e-14,3;UBERON:0002031,6.68e-14,3;UBERON:0004119,2.19e-13,160;UBERON:0000925,2.19e-13,160;UBERON:0006595,2.19e-13,160;UBERON:0007196,2.66e-13,15;UBERON:0001558,2.66e-13,15;UBERON:0003126,5.13e-10,7;UBERON:0001005,5.13e-10,7;UBERON:0008947,2.22e-09,38;UBERON:0003258,2.22e-09,38;UBERON:0002419,3.36e-09,2;UBERON:0007771,3.36e-09,2;UBERON:0003297,3.36e-09,2;UBERON:0001821,3.36e-09,2;UBERON:0003487,3.36e-09,2;UBERON:0001820,3.36e-09,2;UBERON:0005089,3.36e-09,2;UBERON:0005088,3.36e-09,2;UBERON:0005178,7.86e-09,34;UBERON:0002224,7.86e-09,34;UBERON:0000072,8.09e-09,47;UBERON:0000365,1.01e-08,5;UBERON:0005181,1.56e-08,35;UBERON:0002185,1.61e-08,5;UBERON:0003102,1.48e-07,99;UBERON:0005157,1.66e-07,47;UBERON:0005910,2.49e-07,6;UBERON:0001003,4.86e-07,15;UBERON:0007376,4.86e-07,15;UBERON:0007383,4.86e-07,15 | |||
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| ||
|short_description=p@chr17:39775781..39775811,- | |short_description=p@chr17:39775781..39775811,- | ||
}} | }} |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39775781..39775811, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39775781..39775811, - |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 1.26e-14 | 54 |
respiratory system | 1.27e-14 | 74 |
lower respiratory tract epithelium | 6.68e-14 | 3 |
epithelium of bronchus | 6.68e-14 | 3 |
endoderm-derived structure | 2.19e-13 | 160 |
endoderm | 2.19e-13 | 160 |
presumptive endoderm | 2.19e-13 | 160 |
tracheobronchial tree | 2.66e-13 | 15 |
lower respiratory tract | 2.66e-13 | 15 |
trachea | 5.13e-10 | 7 |
respiratory airway | 5.13e-10 | 7 |
respiratory primordium | 2.22e-09 | 38 |
endoderm of foregut | 2.22e-09 | 38 |
skin gland | 3.36e-09 | 2 |
epidermis gland | 3.36e-09 | 2 |
gland of integumental system | 3.36e-09 | 2 |
sebaceous gland | 3.36e-09 | 2 |
skin sebaceous gland | 3.36e-09 | 2 |
sweat gland | 3.36e-09 | 2 |
sweat gland placode | 3.36e-09 | 2 |
sebaceous gland placode | 3.36e-09 | 2 |
thoracic cavity element | 7.86e-09 | 34 |
thoracic cavity | 7.86e-09 | 34 |
segment of respiratory tract | 8.09e-09 | 47 |
urothelium | 1.01e-08 | 5 |
thoracic segment organ | 1.56e-08 | 35 |
bronchus | 1.61e-08 | 5 |
surface structure | 1.48e-07 | 99 |
epithelial fold | 1.66e-07 | 47 |
transitional epithelium | 2.49e-07 | 6 |
skin epidermis | 4.86e-07 | 15 |
outer epithelium | 4.86e-07 | 15 |
enveloping layer of ectoderm | 4.86e-07 | 15 |