FFCP PHASE1:Hg19::chr18:48556573..48556640,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:48556573..48556640,+
|short_description=p1@SMAD4
|description=CAGE_peak_1_at_SMAD4_5end
|association_with_transcript=0bp_to_ENST00000342988,ENST0000054492...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4089 | |EntrezGene=4089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6770 | |HGNC=6770 | ||
|TSSclassifier=strong | |||
|UniProt=Q13485,Q9BYG6 | |UniProt=Q13485,Q9BYG6 | ||
|association_with_transcript=0bp_to_ENST00000342988,ENST00000544926,NM_005359,uc010xdp.1_5end | |||
|cluster_id=chr18:48556573..48556640,+ | |||
|description=CAGE_peak_1_at_SMAD4_5end | |||
|id=chr18:48556573..48556640,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-21!115;UBERON:0000073!1.60e-09!94;UBERON:0001016!1.60e-09!94;UBERON:0005743!2.98e-08!86;UBERON:0001017!4.33e-08!82;UBERON:0001049!8.27e-07!57;UBERON:0005068!8.27e-07!57;UBERON:0006241!8.27e-07!57;UBERON:0007135!8.27e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;9.65e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-21,114;UBERON:0001016,5.51e-09,89;UBERON:0001017,9.90e-08,81 | |||
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| ||
|short_description=p1@SMAD4 | |||
}} | }} |
Latest revision as of 18:54, 19 September 2015
Short description: | p1@SMAD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMAD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342988, ENST00000544926, NM_005359, uc010xdp.1_5end |
EntrezGene: | SMAD4 |
HGNC: | 6770 |
UniProt: | Q13485Q9BYG6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-21 | 114 |
nervous system | 5.51e-09 | 89 |
central nervous system | 9.90e-08 | 81 |