FFCP PHASE1:Hg19::chr16:85617478..85617492,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85617478..85617492,- | |||
|coexpression_cluster_id=C298 | |coexpression_cluster_id=C298 | ||
|description=CAGE_peak_at_chr16:85617478..85617492,- | |description=CAGE_peak_at_chr16:85617478..85617492,- | ||
|id=chr16:85617478..85617492,- | |id=chr16:85617478..85617492,- | ||
|ontology_enrichment_celltype=CL:0002319!3.19e-11!25;CL:0000133!5.15e-09!59;CL:0000047!3.48e-08!8;CL:0000319!7.97e-08!1;CL:0000221!2.96e-07!71 | |ontology_enrichment_celltype=CL:0002319!3.19e-11!25;CL:0000133!5.15e-09!59;CL:0000047!3.48e-08!8;CL:0000319!7.97e-08!1;CL:0000221!2.96e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.81e-21;2!CL:0000123;5.69e-21;2!CL:0000242;5.69e-21;2!CL:0002319;5.42e-14;25!CL:0000312;3.22e-09;5!CL:0000540;6.78e-08;6!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.96e-21,2;CL:0000047,8.98e-21,8;CL:0002319,5.66e-14,25;CL:0000312,3.49e-09,5;CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6!CL:0000031;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:3030!7.97e-08!1 | |ontology_enrichment_disease=DOID:3030!7.97e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3307;5.69e-21;2!DOID:4362;2.53e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.66e-21,2;DOID:4362,2.53e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004089!2.81e-14!2;UBERON:0001831!4.66e-08!1;UBERON:0001567!4.66e-08!1;UBERON:0008801!4.66e-08!1;UBERON:0005705!6.52e-08!1;UBERON:0008193!6.52e-08!1;UBERON:0002514!6.52e-08!1;UBERON:0003462!6.52e-08!1;UBERON:0008001!6.52e-08!1;UBERON:0007914!6.52e-08!1;UBERON:0003457!6.52e-08!1;UBERON:0009292!6.52e-08!1;UBERON:0007375!6.52e-08!1;UBERON:0003323!6.52e-08!1;UBERON:0002397!6.52e-08!1;UBERON:0001709!6.52e-08!1;UBERON:0004066!6.52e-08!1;UBERON:0002244!6.52e-08!1;UBERON:0005620!6.52e-08!1;UBERON:0004068!6.52e-08!1;UBERON:0004362!6.52e-08!1;UBERON:0002581!1.87e-07!1 | |ontology_enrichment_uberon=UBERON:0004089!2.81e-14!2;UBERON:0001831!4.66e-08!1;UBERON:0001567!4.66e-08!1;UBERON:0008801!4.66e-08!1;UBERON:0005705!6.52e-08!1;UBERON:0008193!6.52e-08!1;UBERON:0002514!6.52e-08!1;UBERON:0003462!6.52e-08!1;UBERON:0008001!6.52e-08!1;UBERON:0007914!6.52e-08!1;UBERON:0003457!6.52e-08!1;UBERON:0009292!6.52e-08!1;UBERON:0007375!6.52e-08!1;UBERON:0003323!6.52e-08!1;UBERON:0002397!6.52e-08!1;UBERON:0001709!6.52e-08!1;UBERON:0004066!6.52e-08!1;UBERON:0002244!6.52e-08!1;UBERON:0005620!6.52e-08!1;UBERON:0004068!6.52e-08!1;UBERON:0004362!6.52e-08!1;UBERON:0002581!1.87e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6 | |||
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|short_description=p@chr16:85617478..85617492,- | |short_description=p@chr16:85617478..85617492,- | ||
}} | }} |
Latest revision as of 13:01, 25 July 2015
Short description: | p@chr16:85617478..85617492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85617478..85617492, - |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.96e-21 | 2 |
neuronal stem cell | 8.98e-21 | 8 |
neural cell | 5.66e-14 | 25 |
keratinocyte | 3.49e-09 | 5 |
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.66e-21 | 2 |
cervical cancer | 2.53e-09 | 5 |