FFCP PHASE1:Hg19::chr16:84353087..84353097,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:84353087..84353097,+ | |||
|coexpression_cluster_id=C418 | |coexpression_cluster_id=C418 | ||
|description=CAGE_peak_at_chr16:84353087..84353097,+ | |description=CAGE_peak_at_chr16:84353087..84353097,+ | ||
|id=chr16:84353087..84353097,+ | |id=chr16:84353087..84353097,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.53e-16!10;CL:0000541!1.53e-16!10;CL:0000147!1.23e-11!14;CL:0000710!5.94e-08!20;CL:0002567!1.43e-07!3 | |ontology_enrichment_celltype=CL:0000148!1.53e-16!10;CL:0000541!1.53e-16!10;CL:0000147!1.23e-11!14;CL:0000710!5.94e-08!20;CL:0002567!1.43e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.18e-38;3!CL:0000148;2.66e-12;10!CL:0000147;4.56e-09;14!CL:0002563;1.70e-08;4!CL:0002537;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.19e-38,3;CL:0000148,2.98e-12,10;CL:0000541,2.98e-12,10;CL:0000147,4.95e-09,14;CL:0002563,1.70e-08,4;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.74e-09;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!3.53e-42!9;UBERON:0001557!4.13e-19!19;UBERON:0008947!8.66e-11!38;UBERON:0003258!8.66e-11!38;UBERON:0000065!3.36e-07!53;UBERON:0003978!5.28e-07!3;UBERON:0009751!5.28e-07!3;UBERON:0000946!5.28e-07!3;UBERON:0002523!5.28e-07!3;UBERON:0005983!5.28e-07!3;UBERON:0002165!5.28e-07!3;UBERON:0002062!5.28e-07!3;UBERON:0007280!5.28e-07!3;UBERON:0000072!6.16e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!3.53e-42!9;UBERON:0001557!4.13e-19!19;UBERON:0008947!8.66e-11!38;UBERON:0003258!8.66e-11!38;UBERON:0000065!3.36e-07!53;UBERON:0003978!5.28e-07!3;UBERON:0009751!5.28e-07!3;UBERON:0000946!5.28e-07!3;UBERON:0002523!5.28e-07!3;UBERON:0005983!5.28e-07!3;UBERON:0002165!5.28e-07!3;UBERON:0002062!5.28e-07!3;UBERON:0007280!5.28e-07!3;UBERON:0000072!6.16e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.86e-29;9!UBERON:0001557;7.86e-29;9!UBERON:0001242;1.70e-08;4!UBERON:0001262;1.70e-08;4!UBERON:0004786;1.70e-08;4!UBERON:0004808;1.70e-08;4!UBERON:0001277;1.70e-08;4!UBERON:0000065;5.06e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.12e-29,9;UBERON:0001557,3.46e-14,19;UBERON:0001242,1.70e-08,4;UBERON:0001262,1.70e-08,4;UBERON:0004786,1.70e-08,4;UBERON:0004808,1.70e-08,4;UBERON:0001277,1.70e-08,4;UBERON:0008947,1.95e-07,38;UBERON:0003258,1.95e-07,38 | |||
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|short_description=p@chr16:84353087..84353097,+ | |short_description=p@chr16:84353087..84353097,+ | ||
}} | }} |
Latest revision as of 12:53, 25 July 2015
Short description: | p@chr16:84353087..84353097, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:84353087..84353097, + |
Coexpression cluster: | C418_normal_Melanocyte_Hep2_cervical_umbilical_osteosarcoma_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.19e-38 | 3 |
melanocyte | 2.98e-12 | 10 |
melanoblast | 2.98e-12 | 10 |
pigment cell | 4.95e-09 | 14 |
intestinal epithelial cell | 1.70e-08 | 4 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.12e-29 | 9 |
upper respiratory tract | 3.46e-14 | 19 |
intestinal mucosa | 1.70e-08 | 4 |
wall of intestine | 1.70e-08 | 4 |
gastrointestinal system mucosa | 1.70e-08 | 4 |
gastrointestinal system epithelium | 1.70e-08 | 4 |
intestinal epithelium | 1.70e-08 | 4 |
respiratory primordium | 1.95e-07 | 38 |
endoderm of foregut | 1.95e-07 | 38 |