FFCP PHASE1:Hg19::chr16:56368957..56368963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:56368957..56368963,+ | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr16:56368957..56368963,+ | |description=CAGE_peak_at_chr16:56368957..56368963,+ | ||
|id=chr16:56368957..56368963,+ | |id=chr16:56368957..56368963,+ | ||
|ontology_enrichment_celltype=CL:0000575!5.00e-45!2;CL:0002336!6.40e-23!1;CL:0002261!6.40e-23!1;CL:0002170!6.40e-23!1;CL:0002159!6.01e-16!13;CL:0000240!1.76e-15!6;CL:0000311!1.76e-15!6;CL:0000079!1.76e-15!6;CL:0000237!1.76e-15!6;CL:0000036!1.76e-15!6;CL:0000357!1.76e-15!6;CL:0000114!1.76e-15!6;CL:0000076!8.27e-13!62;CL:0002077!3.94e-11!33;CL:0002251!4.17e-10!21;CL:0002231!1.40e-08!3;CL:0002076!1.45e-08!43;CL:0000221!1.04e-07!71 | |ontology_enrichment_celltype=CL:0000575!5.00e-45!2;CL:0002336!6.40e-23!1;CL:0002261!6.40e-23!1;CL:0002170!6.40e-23!1;CL:0002159!6.01e-16!13;CL:0000240!1.76e-15!6;CL:0000311!1.76e-15!6;CL:0000079!1.76e-15!6;CL:0000237!1.76e-15!6;CL:0000036!1.76e-15!6;CL:0000357!1.76e-15!6;CL:0000114!1.76e-15!6;CL:0000076!8.27e-13!62;CL:0002077!3.94e-11!33;CL:0002251!4.17e-10!21;CL:0002231!1.40e-08!3;CL:0002076!1.45e-08!43;CL:0000221!1.04e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000575;4.52e-50;2!CL:0002159;2.00e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,4.52e-50,2;CL:0002159,2.00e-08,14;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.68e-07!14 | |ontology_enrichment_disease=DOID:1749!2.68e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!4.98e-40!5;UBERON:0003343!4.11e-23!4;UBERON:0004785!4.11e-23!4;UBERON:0000964!4.11e-23!4;UBERON:0004348!4.11e-23!4;UBERON:0005427!4.11e-23!4;UBERON:0000344!3.63e-17!12;UBERON:0001444!1.09e-11!48;UBERON:0003102!3.16e-11!95;UBERON:0000974!7.40e-10!10;UBERON:0000165!9.88e-08!28;UBERON:0000930!9.88e-08!28;UBERON:0001801!2.68e-07!14;UBERON:0002342!2.68e-07!14;UBERON:0005062!2.68e-07!14 | |ontology_enrichment_uberon=UBERON:0003729!4.98e-40!5;UBERON:0003343!4.11e-23!4;UBERON:0004785!4.11e-23!4;UBERON:0000964!4.11e-23!4;UBERON:0004348!4.11e-23!4;UBERON:0005427!4.11e-23!4;UBERON:0000344!3.63e-17!12;UBERON:0001444!1.09e-11!48;UBERON:0003102!3.16e-11!95;UBERON:0000974!7.40e-10!10;UBERON:0000165!9.88e-08!28;UBERON:0000930!9.88e-08!28;UBERON:0001801!2.68e-07!14;UBERON:0002342!2.68e-07!14;UBERON:0005062!2.68e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;5.56e-26;4!UBERON:0004785;5.56e-26;4!UBERON:0000964;7.14e-26;4!UBERON:0010409;7.14e-26;4!UBERON:0000974;7.67e-18;6!UBERON:0010313;3.02e-11;10!UBERON:0000033;1.65e-10;50!UBERON:0001444;1.59e-09;48!UBERON:0003729;5.28e-09;13!UBERON:0001801;2.00e-08;14!UBERON:0007811;3.58e-08;52!UBERON:0000153;3.44e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0000964,7.14e-26,4;UBERON:0010409,7.14e-26,4;UBERON:0004348,7.14e-26,4;UBERON:0005427,7.14e-26,4;UBERON:0000974,2.73e-11,10;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0001444,2.38e-09,49;UBERON:0003729,5.28e-09,13;UBERON:0001801,2.00e-08,14;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62 | |||
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|short_description=p@chr16:56368957..56368963,+ | |short_description=p@chr16:56368957..56368963,+ | ||
}} | }} |
Latest revision as of 10:00, 25 July 2015
Short description: | p@chr16:56368957..56368963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:56368957..56368963, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 4.52e-50 | 2 |
general ecto-epithelial cell | 2.00e-08 | 14 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.56e-26 | 4 |
respiratory system mucosa | 5.56e-26 | 4 |
cornea | 7.14e-26 | 4 |
eye surface | 7.14e-26 | 4 |
optic eminence | 7.14e-26 | 4 |
corneal primordium | 7.14e-26 | 4 |
neck | 2.73e-11 | 10 |
neural crest-derived structure | 3.02e-11 | 10 |
neural crest | 3.02e-11 | 10 |
neural fold | 3.02e-11 | 10 |
subdivision of head | 2.38e-09 | 49 |
mouth mucosa | 5.28e-09 | 13 |
anterior segment of eyeball | 2.00e-08 | 14 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |