FFCP PHASE1:Hg19::chr16:3118178..3118198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9235 | |EntrezGene=9235 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16830 | |HGNC=16830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000525003_5end | |association_with_transcript=59bp_to_ENST00000525003_5end | ||
|cluster_id=chr16:3118178..3118198,+ | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_6_at_IL32_5end | |description=CAGE_peak_6_at_IL32_5end | ||
|id=chr16:3118178..3118198,+ | |id=chr16:3118178..3118198,+ | ||
|ontology_enrichment_celltype=CL:0000791!5.30e-13!18;CL:0000789!5.30e-13!18;CL:0002420!5.30e-13!18;CL:0002419!5.30e-13!18;CL:0000790!5.30e-13!18;CL:0000084!2.22e-12!25;CL:0000827!2.22e-12!25;CL:0000625!1.37e-08!11;CL:0000222!2.87e-08!119;CL:0002078!3.04e-08!44;CL:0000213!8.50e-08!57;CL:0000215!8.50e-08!57;CL:0000115!1.48e-07!35;CL:1000497!1.80e-07!18;CL:0002518!1.80e-07!18;CL:0002139!7.11e-07!24;CL:1000449!9.50e-07!16 | |ontology_enrichment_celltype=CL:0000791!5.30e-13!18;CL:0000789!5.30e-13!18;CL:0002420!5.30e-13!18;CL:0002419!5.30e-13!18;CL:0000790!5.30e-13!18;CL:0000084!2.22e-12!25;CL:0000827!2.22e-12!25;CL:0000625!1.37e-08!11;CL:0000222!2.87e-08!119;CL:0002078!3.04e-08!44;CL:0000213!8.50e-08!57;CL:0000215!8.50e-08!57;CL:0000115!1.48e-07!35;CL:1000497!1.80e-07!18;CL:0002518!1.80e-07!18;CL:0002139!7.11e-07!24;CL:1000449!9.50e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.20e-22;25!CL:0000791;3.54e-21;18!CL:0000789;3.54e-21;18!CL:0002419;3.54e-21;18!CL:0000625;5.48e-14;11!CL:0000624;2.04e-07;6!CL:0000542;4.31e-07;53!CL:0002139;5.31e-07;24!CL:1000449;5.32e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.56e-22,25;CL:0000827,3.56e-22,25;CL:0000791,4.36e-21,18;CL:0000789,4.36e-21,18;CL:0002420,4.36e-21,18;CL:0002419,4.36e-21,18;CL:0000790,4.36e-21,18;CL:0000625,6.45e-14,11;CL:0000838,1.16e-11,52;CL:0000542,2.59e-11,53;CL:0000051,2.59e-11,53;CL:0000624,1.96e-07,6;CL:1000449,5.28e-07,15;CL:0002078,6.57e-07,45;CL:0002139,6.58e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.54e-21;18!CL:0000051;4.31e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.23e-12!118;UBERON:0004535!3.98e-09!110;UBERON:0001009!4.24e-09!113;UBERON:0000055!2.20e-08!69;UBERON:0006554!2.90e-08!44;UBERON:0001008!7.71e-08!45;UBERON:0000490!4.65e-07!138;UBERON:0004211!9.50e-07!16;UBERON:0001285!9.50e-07!16;UBERON:0007684!9.50e-07!16;UBERON:0003220!9.50e-07!16;UBERON:0004208!9.50e-07!16 | |ontology_enrichment_uberon=UBERON:0003914!2.23e-12!118;UBERON:0004535!3.98e-09!110;UBERON:0001009!4.24e-09!113;UBERON:0000055!2.20e-08!69;UBERON:0006554!2.90e-08!44;UBERON:0001008!7.71e-08!45;UBERON:0000490!4.65e-07!138;UBERON:0004211!9.50e-07!16;UBERON:0001285!9.50e-07!16;UBERON:0007684!9.50e-07!16;UBERON:0003220!9.50e-07!16;UBERON:0004208!9.50e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.32e-07;15!UBERON:0004819;5.32e-07;15!UBERON:0001285;5.32e-07;15!UBERON:0007684;5.32e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.44e-07,117;UBERON:0004211,5.28e-07,15;UBERON:0009773,5.28e-07,15;UBERON:0001231,5.28e-07,15;UBERON:0001285,5.28e-07,15;UBERON:0007684,5.28e-07,15;UBERON:0004208,5.28e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,1.74467704820074,0,0,0,1.22866968250754,8.37361401566913,0,0.791300934685361,0,0,1.34465029290355,1.20538905604795,3.65155045193687,0.975865597581014,0,0,0,0,0.136874425072884,0.251085279189606,1.29902789771517,0.57470412614962,0.787107813136792,0,0.767658796194425,0,0,0.6024118375565,0,0,0,0,1.10799081706375,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,4.32311839024081,3.90642848099067,26.2482797763365,2.28145586643513,2.36723902867367,1.94826728407911,34.7600625481742,9.42738903919479,13.5135675696009,10.8321545506006,28.6924556185512,29.1332938534127,18.4170453156117,22.3843514406537,11.8819265151372,1.4828656316206,2.1403266247177,4.18142095219907,11.1043155843615,4.98186641682498,6.18529401868734,6.32549230048757,3.82278497188916,4.55758417699493,4.75226022224187,2.40920190524436,2.8157054453972,2.49861453104692,4.97232229292435,7.39015197228942,0.403213486449465,6.41856469880418,1.01377082717959,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.694281003215189,1.13061588384802,2.09749718104953,0.550236083880135,1.46296476575767,1.55050055501597,0.71153252537342,0.33472061276467,1.20848795132744,3.04108842287405,3.41686880567437,0.735326160691737,5.67099363517232,0,0,0.112611480483322,0,0.949265659568129,1.28241220751285,0,0,0,0.993943903390637,0.759783069987479,0,0.573673241497627,0,1.68203280042692,4.2699598291882,1.2333377420858,0,0.538842688278752,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.63647672354501,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.435758888184812,0,0,0,0,0.738155454624648,0,0,0,2.53510069643662,6.87979051674338,2.36315962672562,0,1.10689594688802,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,4.04226053731007,5.09284063834272,7.03940363268014,0,0,0,0,0.148631162288728,0.93733833986777,2.35174979478403,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,3.13838403181876,1.37921532141349,4.9594342217689,1.28343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.713715955188647,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0.620304078368662,3.23571301227925,1.60091336705167,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.482561763430822,0,0.308419387605311,0.177561725313127,0,0.519254429183621,0,2.90062679019893,1.60405176242628,0,0.229628896329213,0.364182336013434,2.88473712910733,0.902399225814824,1.30926073077505,0,2.92278449306521,1.05551628892876,4.54933536283586,0.850468526382578,0.647747748306418,6.16909010761157,0.270946437543853,1.50506932156456,0.509752546090077,1.66215201785745,2.0148727924996,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.193341436584244,0,0.15350367472613,0.964856007391714,0.107420244868274,0.435050081742686,0.255679882248303,1.06838442776085,1.4875642382488,3.2672311452068,0.382838137483752,1.11273558941105,1.39453664789186,0,0.6970372701606,0,0,0,0.37064843820784,0.715624433709956,0,0,0.190630193923825,0.255897791311334,0,0,3.92474320099615,0.179872457583315,0,0,0,0,1.26377536871694,0,1.21856744815642,2.11300293513511,0.136499911407986,0.282810863907425,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0.563391205064483,0,0.196498082026242,0,0.354761064070598,1.05553817648832,0.987884678879706,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,1.29151611801369,3.36942951335251,1.7737206141467,0.229723400206959,0.507447609232169,0,1.70894156152249,0.952927101831156,2.05681136543097,0.648473311192717,3.24018862342869,3.96562588147135,0,0,0,0,0,0,0,5.18906365725323,0,0,0,0,0,0,0,1.18504244461122,0,0,0,0,0,0,0,1.75849285861836,0,0,0,0,0,0.18714054040822,0.146508179271894,0,1.22587722705226,0,0,0.296964680832639,0.307160702099232,0,0,0,0,0,0.398495976502139,0.828851746593443,0,0,0.123084805461069,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0.651884231532048,0,0.549585560411174,0.533034776018635,2.04386596391473,0.470940769185074,0,0,0,0,0,0,5.90794580678476,0,0.141353071433941,0,0,0.442287822516696,1.83309043480088,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0.661983911750998,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0,0,0.881747022766871,0.426905989478705,0.39961921916426,0,0,0,0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| ||
|short_description=p6@IL32 | |short_description=p6@IL32 | ||
}} | }} |
Latest revision as of 11:32, 16 September 2015
Short description: | p6@IL32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IL32_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | 59bp_to_ENST00000525003_5end |
EntrezGene: | IL32 |
HGNC: | 16830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.56e-22 | 25 |
pro-T cell | 3.56e-22 | 25 |
mature alpha-beta T cell | 4.36e-21 | 18 |
alpha-beta T cell | 4.36e-21 | 18 |
immature T cell | 4.36e-21 | 18 |
mature T cell | 4.36e-21 | 18 |
immature alpha-beta T cell | 4.36e-21 | 18 |
CD8-positive, alpha-beta T cell | 6.45e-14 | 11 |
lymphoid lineage restricted progenitor cell | 1.16e-11 | 52 |
lymphocyte | 2.59e-11 | 53 |
common lymphoid progenitor | 2.59e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.96e-07 | 6 |
epithelial cell of nephron | 5.28e-07 | 15 |
meso-epithelial cell | 6.57e-07 | 45 |
endothelial cell of vascular tree | 6.58e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.44e-07 | 117 |
nephron epithelium | 5.28e-07 | 15 |
renal tubule | 5.28e-07 | 15 |
nephron tubule | 5.28e-07 | 15 |
nephron | 5.28e-07 | 15 |
uriniferous tubule | 5.28e-07 | 15 |
nephrogenic mesenchyme | 5.28e-07 | 15 |