FFCP PHASE1:Hg19::chr16:20912356..20912377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57149 | |EntrezGene=57149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25074 | |HGNC=25074 | ||
|TSSclassifier=strong | |||
|UniProt=O43325 | |UniProt=O43325 | ||
|association_with_transcript=-48bp_to_ENST00000396052,uc002dib.2_5end | |association_with_transcript=-48bp_to_ENST00000396052,uc002dib.2_5end | ||
|cluster_id=chr16:20912356..20912377,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_9_at_LYRM1_5end | |description=CAGE_peak_9_at_LYRM1_5end | ||
|id=chr16:20912356..20912377,+ | |id=chr16:20912356..20912377,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.07e-15!42;CL:0000860!5.75e-14!45;CL:0000766!4.99e-12!76;CL:0000557!7.16e-11!71;CL:0000738!2.55e-10!140;CL:0002009!2.25e-09!65;CL:0000839!4.31e-09!70;CL:0002031!8.71e-09!124;CL:0000988!1.05e-08!182;CL:0000763!1.24e-08!112;CL:0000049!1.24e-08!112;CL:0002194!1.40e-08!63;CL:0000576!1.40e-08!63;CL:0000040!1.40e-08!63;CL:0000559!1.40e-08!63;CL:0000037!1.40e-08!172;CL:0000566!1.40e-08!172;CL:0002032!1.69e-08!165;CL:0000837!1.69e-08!165;CL:0002087!1.98e-08!119 | |ontology_enrichment_celltype=CL:0002057!1.07e-15!42;CL:0000860!5.75e-14!45;CL:0000766!4.99e-12!76;CL:0000557!7.16e-11!71;CL:0000738!2.55e-10!140;CL:0002009!2.25e-09!65;CL:0000839!4.31e-09!70;CL:0002031!8.71e-09!124;CL:0000988!1.05e-08!182;CL:0000763!1.24e-08!112;CL:0000049!1.24e-08!112;CL:0002194!1.40e-08!63;CL:0000576!1.40e-08!63;CL:0000040!1.40e-08!63;CL:0000559!1.40e-08!63;CL:0000037!1.40e-08!172;CL:0000566!1.40e-08!172;CL:0002032!1.69e-08!165;CL:0000837!1.69e-08!165;CL:0002087!1.98e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.37e-20;33!CL:0002057;6.37e-20;33!CL:0000576;9.81e-14;48!CL:0000766;1.99e-13;69!CL:0000473;6.35e-13;39!CL:0000234;6.35e-13;39!CL:0000094;1.38e-10;8!CL:0000081;3.42e-10;11!CL:0000763;7.40e-08;100!CL:0002393;4.26e-07;6!CL:0002397;4.26e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.35e-30,72;CL:0000860,2.87e-25,42;CL:0002057,2.87e-25,42;CL:0000557,1.60e-24,67;CL:0000763,2.65e-22,108;CL:0000049,2.65e-22,108;CL:0000738,2.24e-21,136;CL:0000839,2.26e-21,66;CL:0000473,2.86e-21,48;CL:0000234,2.86e-21,48;CL:0002009,6.24e-20,61;CL:0002194,4.99e-19,59;CL:0000576,4.99e-19,59;CL:0000040,4.99e-19,59;CL:0000559,4.99e-19,59;CL:0000988,8.34e-19,177;CL:0000037,3.93e-18,168;CL:0002032,2.37e-17,161;CL:0000837,2.37e-17,161;CL:0002031,3.66e-15,120;CL:0002087,1.05e-13,115;CL:0000094,5.37e-11,8;CL:0000081,1.41e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.55e-08!102;UBERON:0003061!1.55e-08!102;UBERON:0002371!3.20e-08!80;UBERON:0002780!8.37e-08!41;UBERON:0001890!8.37e-08!41;UBERON:0006240!8.37e-08!41;UBERON:0001474!9.30e-08!86;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57;UBERON:0003080!2.81e-07!42;UBERON:0002193!3.27e-07!112 | |ontology_enrichment_uberon=UBERON:0002390!1.55e-08!102;UBERON:0003061!1.55e-08!102;UBERON:0002371!3.20e-08!80;UBERON:0002780!8.37e-08!41;UBERON:0001890!8.37e-08!41;UBERON:0006240!8.37e-08!41;UBERON:0001474!9.30e-08!86;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57;UBERON:0003080!2.81e-07!42;UBERON:0002193!3.27e-07!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.19e-21,98;UBERON:0003061,7.19e-21,98;UBERON:0002371,1.21e-20,76;UBERON:0001474,1.56e-18,82;UBERON:0002193,4.69e-18,108;UBERON:0004765,3.62e-16,90;UBERON:0002405,2.18e-15,93;UBERON:0001434,9.36e-14,100;UBERON:0003081,9.24e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0.687720651731561,0.821005894499457,0.787107813136792,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,2.21598163412751,3.00816671205213,2.60413044859022,0,0,0.257575567634187,0.145398238779565,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0.575384784644301,2.0492856522328,2.83778675866302,1.72372840368309,1.29096936716765,1.35426486594342,0.564727018627814,1.09162460023138,0.674170453335254,3.67300670845083,1.92557416245656,4.47535988059329,0.989553900560148,0.797854630486527,0.852449501065388,2.03146467040009,2.26954089876456,3.73693349397345,1.50749199154046,1.0429658368404,1.08594422352558,1.21079900526674,5.15588690382591,4.1140110367315,1.69004229049553,0.850417199860174,0.628975936525128,0.673971786878971,1.20141514273205,0.32145117339416,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,1.28019066769952,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,0,0.526768169550154,0.590129310341499,0.786021525498329,0.822405995998037,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0.493313713811028,0.276350017785848,0,0,0,0,0.339928028092699,0,1.37450978193052,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.80642697289893,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.175669571386252,1.17881167947941,0.364295288292542,0.370784442784429,0,1.21890816109487,2.26028532882071,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,1.10298924103761,0,0.17859945656816,0.673588117878509,0.563057402416611,0,0,0.183201743930407,5.27121669744253,23.2668158488995,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,0.245668634623536,0.619954687054593,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.674338760312407,0,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0.201057944823262,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0,0.702012795417713,0.594524649154913,0,0,0.141775097242386,1.34337784054272,0,0.383382679165211,0,0.528290604079356,1.65862492432618,1.44119953416961,2.27236380167484,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0.672510863961164,1.37921532141349,0.646882724578552,1.41177339907723,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0.613457458595699,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.587403472388222,0,1.24060815673732,1.07857100409308,0.853820462427555,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.362578348774867,0.200506470303285,0.276242966807689,0.114814448164607,0.910455840033585,0.262248829918848,0,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0.412164046590889,0.0915694648183434,0,0.574265537996172,1.30012049207304,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.429680979473094,0.145016693914229,0.340906509664404,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.708104465988849,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0.243713489631284,0,0.682499557039929,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0.709522128141196,0.844430541190656,0,0,0,0.288666338176536,0,1.08890984861323,0.09414380077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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0,0,0,0.572471974262113,0,0.251085279189606,0.687720651731561,0.821005894499457,0.787107813136792,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,2.21598163412751,3.00816671205213,2.60413044859022,0,0,0.257575567634187,0.145398238779565,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0.575384784644301,2.0492856522328,2.83778675866302,1.72372840368309,1.29096936716765,1.35426486594342,0.564727018627814,1.09162460023138,0.674170453335254,3.67300670845083,1.92557416245656,4.47535988059329,0.989553900560148,0.797854630486527,0.852449501065388,2.03146467040009,2.26954089876456,3.73693349397345,1.50749199154046,1.0429658368404,1.08594422352558,1.21079900526674,5.15588690382591,4.1140110367315,1.69004229049553,0.850417199860174,0.628975936525128,0.673971786878971,1.20141514273205,0.32145117339416,0.855038231223746,0.19891667719909,0.182664153764634,0,0,0,1.28019066769952,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,0,0.526768169550154,0.590129310341499,0.786021525498329,0.822405995998037,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0,0.270803863765016,0.25618263945135,0,0.493313713811028,0.276350017785848,0,0,0,0,0.339928028092699,0,1.37450978193052,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.80642697289893,0.267440195783507,0.289648807765598,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.175669571386252,1.17881167947941,0.364295288292542,0.370784442784429,0,1.21890816109487,2.26028532882071,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,1.10298924103761,0,0.17859945656816,0.673588117878509,0.563057402416611,0,0,0.183201743930407,5.27121669744253,23.2668158488995,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.709336764396714,0,0,0,0.622422070799533,0.269421344139376,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0.149448680551801,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,0.245668634623536,0.619954687054593,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.558350568994769,0.168776332241266,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.503760491138201,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.674338760312407,0,0.220587945464788,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0.201057944823262,0.277765335475589,0,1.03993478527958,0,0.463721619900307,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0,0.702012795417713,0.594524649154913,0,0,0.141775097242386,1.34337784054272,0,0.383382679165211,0,0.528290604079356,1.65862492432618,1.44119953416961,2.27236380167484,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.537182889719687,0.672510863961164,1.37921532141349,0.646882724578552,1.41177339907723,0,0,0,0,0,1.49801404789436,0,1.65766205374414,0.613457458595699,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.587403472388222,0,1.24060815673732,1.07857100409308,0.853820462427555,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0.362578348774867,0.200506470303285,0.276242966807689,0.114814448164607,0.910455840033585,0.262248829918848,0,0.308061348417659,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0.650756789328606,0.412164046590889,0.0915694648183434,0,0.574265537996172,1.30012049207304,0,0.290012154876366,0.154048617114644,0.307007349452259,0.275673144969061,0.429680979473094,0.145016693914229,0.340906509664404,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.708104465988849,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0.243713489631284,0,0.682499557039929,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0.709522128141196,0.844430541190656,0,0,0,0.288666338176536,0,1.08890984861323,0.09414380077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| ||
|short_description=p9@LYRM1 | |short_description=p9@LYRM1 | ||
}} | }} |
Latest revision as of 03:16, 25 September 2015
Short description: | p9@LYRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LYRM1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -48bp_to_ENST00000396052, uc002dib.2_5end |
EntrezGene: | LYRM1 |
HGNC: | 25074 |
UniProt: | O43325 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.35e-30 | 72 |
classical monocyte | 2.87e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-25 | 42 |
granulocyte monocyte progenitor cell | 1.60e-24 | 67 |
myeloid cell | 2.65e-22 | 108 |
common myeloid progenitor | 2.65e-22 | 108 |
leukocyte | 2.24e-21 | 136 |
myeloid lineage restricted progenitor cell | 2.26e-21 | 66 |
defensive cell | 2.86e-21 | 48 |
phagocyte | 2.86e-21 | 48 |
macrophage dendritic cell progenitor | 6.24e-20 | 61 |
monopoietic cell | 4.99e-19 | 59 |
monocyte | 4.99e-19 | 59 |
monoblast | 4.99e-19 | 59 |
promonocyte | 4.99e-19 | 59 |
hematopoietic cell | 8.34e-19 | 177 |
hematopoietic stem cell | 3.93e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.37e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 3.66e-15 | 120 |
nongranular leukocyte | 1.05e-13 | 115 |
granulocyte | 5.37e-11 | 8 |
blood cell | 1.41e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.19e-21 | 98 |
blood island | 7.19e-21 | 98 |
bone marrow | 1.21e-20 | 76 |
bone element | 1.56e-18 | 82 |
hemolymphoid system | 4.69e-18 | 108 |
skeletal element | 3.62e-16 | 90 |
immune system | 2.18e-15 | 93 |
skeletal system | 9.36e-14 | 100 |
lateral plate mesoderm | 9.24e-08 | 203 |