FFCP PHASE1:Hg19::chr15:93425910..93425975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000553829,ENST00000557682_5end | |association_with_transcript=0bp_to_ENST00000553829,ENST00000557682_5end | ||
|cluster_id=chr15:93425910..93425975,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_2_at_CHD2_5end | |description=CAGE_peak_2_at_CHD2_5end | ||
|id=chr15:93425910..93425975,+ | |id=chr15:93425910..93425975,+ | ||
|ontology_enrichment_celltype=CL:0000236!1.33e-07!14;CL:0000945!5.82e-07!24;CL:0000826!5.82e-07!24 | |ontology_enrichment_celltype=CL:0000236!1.33e-07!14;CL:0000945!5.82e-07!24;CL:0000826!5.82e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.14e-07;13!CL:0000945;4.20e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.33e-07,14;CL:0000945,5.82e-07,24;CL:0000826,5.82e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.02e-24!115;UBERON:0001049!2.39e-16!57;UBERON:0005068!2.39e-16!57;UBERON:0006241!2.39e-16!57;UBERON:0007135!2.39e-16!57;UBERON:0005743!2.31e-14!86;UBERON:0001017!2.54e-14!82;UBERON:0002346!7.22e-14!90;UBERON:0003075!3.43e-13!86;UBERON:0007284!3.43e-13!86;UBERON:0000073!3.49e-13!94;UBERON:0001016!3.49e-13!94;UBERON:0002616!1.10e-12!59;UBERON:0002020!1.19e-11!34;UBERON:0003528!1.19e-11!34;UBERON:0001893!1.67e-11!34;UBERON:0003080!1.80e-11!42;UBERON:0002780!3.15e-11!41;UBERON:0001890!3.15e-11!41;UBERON:0006240!3.15e-11!41;UBERON:0002791!5.10e-11!33;UBERON:0001869!5.73e-11!32;UBERON:0000955!5.03e-10!69;UBERON:0006238!5.03e-10!69;UBERON:0000956!9.71e-10!25;UBERON:0000203!9.71e-10!25;UBERON:0003056!5.28e-09!61;UBERON:0002619!7.45e-09!22;UBERON:0001950!2.87e-08!20;UBERON:0000924!2.71e-07!173;UBERON:0006601!2.71e-07!173;UBERON:0000033!6.72e-07!123;UBERON:0004121!8.58e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!4.02e-24!115;UBERON:0001049!2.39e-16!57;UBERON:0005068!2.39e-16!57;UBERON:0006241!2.39e-16!57;UBERON:0007135!2.39e-16!57;UBERON:0005743!2.31e-14!86;UBERON:0001017!2.54e-14!82;UBERON:0002346!7.22e-14!90;UBERON:0003075!3.43e-13!86;UBERON:0007284!3.43e-13!86;UBERON:0000073!3.49e-13!94;UBERON:0001016!3.49e-13!94;UBERON:0002616!1.10e-12!59;UBERON:0002020!1.19e-11!34;UBERON:0003528!1.19e-11!34;UBERON:0001893!1.67e-11!34;UBERON:0003080!1.80e-11!42;UBERON:0002780!3.15e-11!41;UBERON:0001890!3.15e-11!41;UBERON:0006240!3.15e-11!41;UBERON:0002791!5.10e-11!33;UBERON:0001869!5.73e-11!32;UBERON:0000955!5.03e-10!69;UBERON:0006238!5.03e-10!69;UBERON:0000956!9.71e-10!25;UBERON:0000203!9.71e-10!25;UBERON:0003056!5.28e-09!61;UBERON:0002619!7.45e-09!22;UBERON:0001950!2.87e-08!20;UBERON:0000924!2.71e-07!173;UBERON:0006601!2.71e-07!173;UBERON:0000033!6.72e-07!123;UBERON:0004121!8.58e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.40e-10;34!UBERON:0003528;7.10e-10;34!UBERON:0002020;7.10e-10;34!UBERON:0001869;8.63e-10;32!UBERON:0002791;1.03e-09;32!UBERON:0000956;1.21e-09;25!UBERON:0000203;1.21e-09;25!UBERON:0000073;1.77e-09;53!UBERON:0002616;1.77e-09;53!UBERON:0002619;9.08e-09;22!UBERON:0002780;1.37e-08;41!UBERON:0001890;1.37e-08;41!UBERON:0001950;3.83e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.33e-23,114;UBERON:0001049,4.26e-16,56;UBERON:0005068,4.26e-16,56;UBERON:0006241,4.26e-16,56;UBERON:0007135,4.26e-16,56;UBERON:0000073,1.01e-14,53;UBERON:0002616,1.01e-14,53;UBERON:0001017,4.48e-14,81;UBERON:0002346,1.35e-13,86;UBERON:0003075,6.35e-13,82;UBERON:0007284,6.35e-13,82;UBERON:0001016,7.46e-13,89;UBERON:0003528,1.19e-11,34;UBERON:0002020,1.19e-11,34;UBERON:0001893,1.67e-11,34;UBERON:0002780,3.15e-11,41;UBERON:0001890,3.15e-11,41;UBERON:0003080,3.15e-11,41;UBERON:0006240,3.15e-11,41;UBERON:0001869,5.73e-11,32;UBERON:0002791,8.58e-11,32;UBERON:0000955,8.51e-10,68;UBERON:0006238,8.51e-10,68;UBERON:0000956,9.71e-10,25;UBERON:0000203,9.71e-10,25;UBERON:0010314,6.83e-09,132;UBERON:0002619,7.45e-09,22;UBERON:0003056,1.18e-08,61;UBERON:0001950,2.87e-08,20;UBERON:0010371,1.72e-07,104;UBERON:0004121,3.73e-07,171;UBERON:0000924,3.73e-07,171;UBERON:0006601,3.73e-07,171 | |||
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| ||
|short_description=p2@CHD2 | |short_description=p2@CHD2 | ||
}} | }} |
Latest revision as of 23:08, 19 September 2015
Short description: | p2@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHD2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000553829, ENST00000557682_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.33e-07 | 14 |
lymphocyte of B lineage | 5.82e-07 | 24 |
pro-B cell | 5.82e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.33e-23 | 114 |
neural tube | 4.26e-16 | 56 |
neural rod | 4.26e-16 | 56 |
future spinal cord | 4.26e-16 | 56 |
neural keel | 4.26e-16 | 56 |
regional part of nervous system | 1.01e-14 | 53 |
regional part of brain | 1.01e-14 | 53 |
central nervous system | 4.48e-14 | 81 |
neurectoderm | 1.35e-13 | 86 |
neural plate | 6.35e-13 | 82 |
presumptive neural plate | 6.35e-13 | 82 |
nervous system | 7.46e-13 | 89 |
brain grey matter | 1.19e-11 | 34 |
gray matter | 1.19e-11 | 34 |
telencephalon | 1.67e-11 | 34 |
regional part of forebrain | 3.15e-11 | 41 |
forebrain | 3.15e-11 | 41 |
anterior neural tube | 3.15e-11 | 41 |
future forebrain | 3.15e-11 | 41 |
cerebral hemisphere | 5.73e-11 | 32 |
regional part of telencephalon | 8.58e-11 | 32 |
brain | 8.51e-10 | 68 |
future brain | 8.51e-10 | 68 |
cerebral cortex | 9.71e-10 | 25 |
pallium | 9.71e-10 | 25 |
structure with developmental contribution from neural crest | 6.83e-09 | 132 |
regional part of cerebral cortex | 7.45e-09 | 22 |
pre-chordal neural plate | 1.18e-08 | 61 |
neocortex | 2.87e-08 | 20 |
ecto-epithelium | 1.72e-07 | 104 |
ectoderm-derived structure | 3.73e-07 | 171 |
ectoderm | 3.73e-07 | 171 |
presumptive ectoderm | 3.73e-07 | 171 |