FFCP PHASE1:Hg19::chr15:77224017..77224024,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5955 | |EntrezGene=5955 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9935 | |HGNC=9935 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCY5 | |UniProt=F8WCY5 | ||
|association_with_transcript=-54bp_to_ENST00000320963_5end | |association_with_transcript=-54bp_to_ENST00000320963_5end | ||
|cluster_id=chr15:77224017..77224024,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_RCN2_5end | |description=CAGE_peak_6_at_RCN2_5end | ||
|id=chr15:77224017..77224024,+ | |id=chr15:77224017..77224024,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.41e-08!25;CL:0000540!1.75e-08!6;CL:0000031!1.75e-08!6;CL:0000404!1.75e-08!6;CL:0000047!6.37e-08!8;CL:0000133!4.70e-07!59 | |ontology_enrichment_celltype=CL:0002319!1.41e-08!25;CL:0000540!1.75e-08!6;CL:0000031!1.75e-08!6;CL:0000404!1.75e-08!6;CL:0000047!6.37e-08!8;CL:0000133!4.70e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.97e-14;6!CL:0000404;3.97e-14;6!CL:0002582;6.78e-08;3!CL:0002592;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.71e-14,6;CL:0000031,3.71e-14,6;CL:0000404,3.71e-14,6;CL:0000047,7.30e-11,8;CL:0002592,5.93e-08,3;CL:0002582,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10!CL:0000031;3.97e-14;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.41e-11!94;UBERON:0001016!6.41e-11!94;UBERON:0005743!8.51e-11!86;UBERON:0001017!1.97e-10!82 | |ontology_enrichment_uberon=UBERON:0000073!6.41e-11!94;UBERON:0001016!6.41e-11!94;UBERON:0005743!8.51e-11!86;UBERON:0001017!1.97e-10!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.80e-23;8!UBERON:0003135;4.84e-17;11!UBERON:0000991;3.08e-09;21!UBERON:0003101;7.61e-09;22!UBERON:0000079;7.61e-09;22!UBERON:0003498;6.78e-08;3!UBERON:0005985;6.78e-08;3!UBERON:0001621;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.42e-23,8;UBERON:0003135,5.40e-17,11;UBERON:0000991,3.26e-09,21;UBERON:0009196,3.26e-09,21;UBERON:0009117,3.26e-09,21;UBERON:0005564,3.26e-09,21;UBERON:0004176,8.03e-09,22;UBERON:0003101,8.03e-09,22;UBERON:0000079,8.03e-09,22;UBERON:0001621,5.93e-08,3 | |||
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| ||
|short_description=p6@RCN2 | |short_description=p6@RCN2 | ||
}} | }} |
Latest revision as of 04:50, 19 September 2015
Short description: | p6@RCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RCN2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -54bp_to_ENST00000320963_5end |
EntrezGene: | RCN2 |
HGNC: | 9935 |
UniProt: | F8WCY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.71e-14 | 6 |
neuroblast | 3.71e-14 | 6 |
electrically signaling cell | 3.71e-14 | 6 |
neuronal stem cell | 7.30e-11 | 8 |
smooth muscle cell of the coronary artery | 5.93e-08 | 3 |
visceral preadipocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.42e-23 | 8 |
male reproductive organ | 5.40e-17 | 11 |
gonad | 3.26e-09 | 21 |
indifferent external genitalia | 3.26e-09 | 21 |
indifferent gonad | 3.26e-09 | 21 |
gonad primordium | 3.26e-09 | 21 |
external genitalia | 8.03e-09 | 22 |
male organism | 8.03e-09 | 22 |
male reproductive system | 8.03e-09 | 22 |
coronary artery | 5.93e-08 | 3 |