FFCP PHASE1:Hg19::chr15:65823105..65823143,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:65823105..65823143,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr15:65823105..65823143,+ | |description=CAGE_peak_at_chr15:65823105..65823143,+ | ||
|id=chr15:65823105..65823143,+ | |id=chr15:65823105..65823143,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000312;4.06e-27;5!CL:0000240;8.47e-23;6!CL:0000311;8.47e-23;6!CL:0000079;8.47e-23;6!CL:0000237;8.47e-23;6!CL:0000123;1.07e-17;2!CL:0000242;1.07e-17;2!CL:0000362;1.41e-15;9!CL:0002159;2.19e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,4.63e-27,5;CL:0000240,9.46e-23,6;CL:0000311,9.46e-23,6;CL:0000079,9.46e-23,6;CL:0000237,9.46e-23,6;CL:0000036,9.46e-23,6;CL:0000357,9.46e-23,6;CL:0000114,9.46e-23,6;CL:0000242,1.07e-17,2;CL:0000362,1.52e-15,9;CL:0002159,2.29e-10,14 | |||
|ontology_enrichment_development_v019=CL:0000357;8.47e-23;6!CL:0000114;8.47e-23;6!UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0006215;2.89e-12;3 | |||
|ontology_enrichment_disease=DOID:162!1.84e-10!235;DOID:14566!3.32e-10!239;DOID:0050687!2.86e-09!143 | |ontology_enrichment_disease=DOID:162!1.84e-10!235;DOID:14566!3.32e-10!239;DOID:0050687!2.86e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0001003;9.24e-10;15!UBERON:0007376;9.24e-10;15!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0002037;8.97e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001003,9.66e-10,15;UBERON:0007376,9.66e-10,15;UBERON:0007383,9.66e-10,15;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0002037,8.48e-07,6;UBERON:0006215,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0.232401601740905,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,1.52581736317083,0,0,0.438770794307945,0.653630781113941,0.41827123283581,0,0.113942055847001,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.329663433524666,0,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.104909176269996,0.211200673038813,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.310482014706917,0.138348634936231,0,0,0.285465333544967,0,1.40500471742064,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0.639471856518258,0.107824811396682,0.157265941855896,0.109209638192014,0.169732529954025,0,0.495743057036009,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0.47404083519818,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0.33883824611688,0.109940516745429,0,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0.946629373159108,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0.18378979906969,0,9.69967337193464,14.2020988982775,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0.232401601740905,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0.72995471815166,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.171567810298526,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0.399158742865633,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,1.52581736317083,0,0,0.438770794307945,0.653630781113941,0.41827123283581,0,0.113942055847001,0,0.179515288819544,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0,0.0882561266915003,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.329663433524666,0,0.0984274815147488,0,0,0,0.482259445395058,0.550157746388935,0,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.104909176269996,0.211200673038813,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0,0.310482014706917,0.138348634936231,0,0,0.285465333544967,0,1.40500471742064,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0.639471856518258,0.107824811396682,0.157265941855896,0.109209638192014,0.169732529954025,0,0.495743057036009,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0.078493092850514,0.471346769748006,0,0,0.215927591218621,0,0.0714765441766563,0.47404083519818,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0.233939463462106,0.994753875806841,0,0.33883824611688,0.109940516745429,0,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0.946629373159108,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0,0,0.18378979906969,0,9.69967337193464,14.2020988982775,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.325613074443898,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p@chr15:65823105..65823143,+ | |short_description=p@chr15:65823105..65823143,+ | ||
}} | }} |
Latest revision as of 03:28, 25 July 2015
Short description: | p@chr15:65823105..65823143, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:65823105..65823143, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 4.63e-27 | 5 |
stratified squamous epithelial cell | 9.46e-23 | 6 |
keratin accumulating cell | 9.46e-23 | 6 |
stratified epithelial cell | 9.46e-23 | 6 |
keratinizing barrier epithelial cell | 9.46e-23 | 6 |
epithelial fate stem cell | 9.46e-23 | 6 |
stratified epithelial stem cell | 9.46e-23 | 6 |
surface ectodermal cell | 9.46e-23 | 6 |
Merkel cell | 1.07e-17 | 2 |
epidermal cell | 1.52e-15 | 9 |
general ecto-epithelial cell | 2.29e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
skin epidermis | 9.66e-10 | 15 |
outer epithelium | 9.66e-10 | 15 |
enveloping layer of ectoderm | 9.66e-10 | 15 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
cerebellum | 8.48e-07 | 6 |
rhombic lip | 8.48e-07 | 6 |