FFCP PHASE1:Hg19::chr15:55562387..55562396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5873 | |EntrezGene=5873 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9766 | |HGNC=9766 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_uc002aco.2_5end | |association_with_transcript=85bp_to_uc002aco.2_5end | ||
|cluster_id=chr15:55562387..55562396,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_10_at_RAB27A_5end | |description=CAGE_peak_10_at_RAB27A_5end | ||
|id=chr15:55562387..55562396,- | |id=chr15:55562387..55562396,- | ||
|ontology_enrichment_celltype=CL:0000148!1.13e-25!10;CL:0000541!1.13e-25!10;CL:0000147!4.61e-18!14;CL:0002567!6.46e-17!3;CL:0000710!7.26e-16!20;CL:0000075!2.33e-14!27;CL:0002077!4.20e-09!33;CL:0000325!1.54e-07!39;CL:0002566!8.34e-07!1 | |ontology_enrichment_celltype=CL:0000148!1.13e-25!10;CL:0000541!1.13e-25!10;CL:0000147!4.61e-18!14;CL:0002567!6.46e-17!3;CL:0000710!7.26e-16!20;CL:0000075!2.33e-14!27;CL:0002077!4.20e-09!33;CL:0000325!1.54e-07!39;CL:0002566!8.34e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.02e-101;10!CL:0002567;3.03e-84;3!CL:0000147;2.65e-72;14!CL:0000710;8.47e-51;20!CL:0000075;9.04e-38;27!CL:0002566;1.33e-29;1!CL:0002077;3.89e-28;34!CL:0000149;2.11e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.02e-101,10;CL:0000541,6.02e-101,10;CL:0002567,3.03e-84,3;CL:0000147,2.65e-72,14;CL:0000710,8.47e-51,20;CL:0000075,9.04e-38,27;CL:0002077,4.29e-30,34;CL:0002566,1.33e-29,1;CL:0000333,6.92e-24,41;CL:0000133,6.05e-17,59;CL:0000221,5.08e-14,72;CL:0000149,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.85e-10;59!CL:0000221;4.53e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!1.06e-11!2 | |ontology_enrichment_disease=DOID:1909!1.06e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.05e-15,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@RAB27A | |short_description=p10@RAB27A | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p10@RAB27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAB27A_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 85bp_to_uc002aco.2_5end |
EntrezGene: | RAB27A |
HGNC: | 9766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.02e-101 | 10 |
melanoblast | 6.02e-101 | 10 |
light melanocyte | 3.03e-84 | 3 |
pigment cell | 2.65e-72 | 14 |
neurecto-epithelial cell | 8.47e-51 | 20 |
columnar/cuboidal epithelial cell | 9.04e-38 | 27 |
ecto-epithelial cell | 4.29e-30 | 34 |
dark melanocyte | 1.33e-29 | 1 |
migratory neural crest cell | 6.92e-24 | 41 |
neurectodermal cell | 6.05e-17 | 59 |
ectodermal cell | 5.08e-14 | 72 |
visual pigment cell | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.05e-15 | 2 |