FFCP PHASE1:Hg19::chr15:34629308..34629322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9990 | |EntrezGene=9990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |HGNC=10914 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHW9 | |UniProt=Q9UHW9 | ||
|association_with_transcript=-263bp_to_ENST00000397707,ENST00000560611,NM_001042497,NM_133647,uc001zhw.2,uc001zhx.2,uc001zhy.2,uc001zhz.2_5end | |association_with_transcript=-263bp_to_ENST00000397707,ENST00000560611,NM_001042497,NM_133647,uc001zhw.2,uc001zhx.2,uc001zhy.2,uc001zhz.2_5end | ||
|cluster_id=chr15:34629308..34629322,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_12_at_SLC12A6_5end | |description=CAGE_peak_12_at_SLC12A6_5end | ||
|id=chr15:34629308..34629322,- | |id=chr15:34629308..34629322,- | ||
|ontology_enrichment_celltype=CL:0000738!9.28e-42!140;CL:0000037!1.04e-39!172;CL:0000566!1.04e-39!172;CL:0002032!3.12e-38!165;CL:0000837!3.12e-38!165;CL:0000988!1.33e-36!182;CL:0002087!2.33e-35!119;CL:0002031!1.00e-33!124;CL:0000766!2.33e-22!76;CL:0002057!1.27e-20!42;CL:0000763!1.60e-19!112;CL:0000049!1.60e-19!112;CL:0000860!1.85e-18!45;CL:0000542!4.68e-18!53;CL:0000051!4.68e-18!53;CL:0000945!8.05e-18!24;CL:0000826!8.05e-18!24;CL:0000838!1.85e-17!52;CL:0000557!8.79e-17!71;CL:0000839!4.68e-16!70;CL:0002009!3.38e-15!65;CL:0002194!3.87e-15!63;CL:0000576!3.87e-15!63;CL:0000040!3.87e-15!63;CL:0000559!3.87e-15!63;CL:0000236!8.61e-13!14;CL:0000094!7.83e-10!8;CL:0000081!5.82e-08!11;CL:0000134!1.90e-07!358;CL:0002320!7.83e-07!365 | |ontology_enrichment_celltype=CL:0000738!9.28e-42!140;CL:0000037!1.04e-39!172;CL:0000566!1.04e-39!172;CL:0002032!3.12e-38!165;CL:0000837!3.12e-38!165;CL:0000988!1.33e-36!182;CL:0002087!2.33e-35!119;CL:0002031!1.00e-33!124;CL:0000766!2.33e-22!76;CL:0002057!1.27e-20!42;CL:0000763!1.60e-19!112;CL:0000049!1.60e-19!112;CL:0000860!1.85e-18!45;CL:0000542!4.68e-18!53;CL:0000051!4.68e-18!53;CL:0000945!8.05e-18!24;CL:0000826!8.05e-18!24;CL:0000838!1.85e-17!52;CL:0000557!8.79e-17!71;CL:0000839!4.68e-16!70;CL:0002009!3.38e-15!65;CL:0002194!3.87e-15!63;CL:0000576!3.87e-15!63;CL:0000040!3.87e-15!63;CL:0000559!3.87e-15!63;CL:0000236!8.61e-13!14;CL:0000094!7.83e-10!8;CL:0000081!5.82e-08!11;CL:0000134!1.90e-07!358;CL:0002320!7.83e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.99e-33;13!CL:0000945;2.99e-23;24!CL:0000775;3.65e-12;3!CL:0000094;6.84e-12;8!CL:0000542;3.34e-11;53!CL:0000771;7.93e-09;2!CL:0000081;1.57e-08;11!CL:0000123;1.51e-07;2!CL:0000242;1.51e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.97e-36,14;CL:0000945,2.53e-23,24;CL:0000826,2.53e-23,24;CL:0000738,5.40e-17,136;CL:0002032,1.08e-16,161;CL:0000837,1.08e-16,161;CL:0000838,7.27e-16,52;CL:0000037,1.18e-15,168;CL:0000542,1.74e-15,53;CL:0000051,1.74e-15,53;CL:0000988,1.93e-14,177;CL:0002031,7.21e-13,120;CL:0002087,1.80e-12,115;CL:0000775,3.54e-12,3;CL:0000094,6.73e-12,8;CL:0000771,7.96e-09,2;CL:0000081,1.55e-08,11;CL:0000242,2.13e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;3.34e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.11e-22!102;UBERON:0003061!8.11e-22!102;UBERON:0002193!4.32e-20!112;UBERON:0002371!2.32e-13!80;UBERON:0001474!1.85e-12!86;UBERON:0002405!1.25e-09!115;UBERON:0004765!2.99e-09!101;UBERON:0001434!2.99e-09!101;UBERON:0000178!3.52e-08!15;UBERON:0000179!3.52e-08!15;UBERON:0000463!3.52e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!8.11e-22!102;UBERON:0003061!8.11e-22!102;UBERON:0002193!4.32e-20!112;UBERON:0002371!2.32e-13!80;UBERON:0001474!1.85e-12!86;UBERON:0002405!1.25e-09!115;UBERON:0004765!2.99e-09!101;UBERON:0001434!2.99e-09!101;UBERON:0000178!3.52e-08!15;UBERON:0000179!3.52e-08!15;UBERON:0000463!3.52e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-13;15!UBERON:0000179;1.55e-13;15!UBERON:0000463;1.55e-13;15!UBERON:0002390;2.30e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.64e-14,15;UBERON:0000179,8.64e-14,15;UBERON:0000463,8.64e-14,15;UBERON:0002390,1.14e-07,98;UBERON:0003061,1.14e-07,98;UBERON:0002193,1.76e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.472264687882075,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0.542270404062111,0.142169232487422,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0.32389366601898,0,0.581592955118259,1.88937971844405,0.970336244751265,0.697287110717054,0.822335776043652,0.619412741790207,0,1.2808035326455,1.89185783910868,0.689491361473237,0,1.35426486594342,0,0.545812300115692,0.449446968890169,0.306083892370903,1.60464513538047,1.27867425159808,0.989553900560148,0.797854630486527,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,0.605399502633369,1.47311054395026,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0.32145117339416,0,0,0,5.27988733383968,8.19207916893197,7.11607403090844,9.38806489646316,4.40435585739614,8.62128659931725,6.61044872784862,7.63243003628291,6.26134266020393,5.87237189370939,3.82273228125229,2.64342657158052,2.80254281490768,0.526768169550154,0.983548850569165,0,1.43921049299656,2.34061093546949,0.651844533267181,0.473447805734733,0,0.891283655081389,1.47302953737419,1.32920336750173,1.89562704635511,0.768547918354051,1.04047478047903,0.986627427622057,1.38175008892924,0.869409257205157,0.14828656316206,0.535081656179426,1.04535523804977,0.226618685395132,0,1.03088233644789,0.759059076058509,0.95569624297229,0,0.950452044448374,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.468008530278475,0.594524649154913,0,0,0,0,0,0,1.47798971368783,0.264145302039678,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,7.49007023947182,5.9832291840805,26.1081773464702,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.886860307073351,0.229723400206959,1.52234282769651,1.52927441428475,3.41788312304498,1.90585420366231,4.93634727703433,1.94541993357815,2.70015718619057,3.17250070517708,0,0,0,0.371606350251437,0,1.06712765022621,0,0,0.191505370132367,1.90506224451495,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,2.81974010175699,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.828851746593443,0,0,0.615424027305347,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0.496166021811951,0.592834895693833,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,2.35265819698172,1.40500471742064,1.30428925749743,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,2.7614397042404,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,2.99608367645026,0,0.135939465953663,0,0,0.889851215136553,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0.198950775161368,0,0,0,0.301925687133347,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,1.50374268767766,0.644578879735772,0.499705779624645,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.322944549180031,0.558672428662721,0,0,0,0,0,1.54909721933551,0.143444410785353,0,0.08140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|short_description=p12@SLC12A6 | |short_description=p12@SLC12A6 | ||
}} | }} |
Latest revision as of 06:40, 17 September 2015
Short description: | p12@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC12A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -263bp_to_ENST00000397707, ENST00000560611, NM_001042497, NM_133647, uc001zhw.2, uc001zhx.2, uc001zhy.2, uc001zhz.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | Q9UHW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.97e-36 | 14 |
lymphocyte of B lineage | 2.53e-23 | 24 |
pro-B cell | 2.53e-23 | 24 |
leukocyte | 5.40e-17 | 136 |
hematopoietic oligopotent progenitor cell | 1.08e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-16 | 161 |
lymphoid lineage restricted progenitor cell | 7.27e-16 | 52 |
hematopoietic stem cell | 1.18e-15 | 168 |
lymphocyte | 1.74e-15 | 53 |
common lymphoid progenitor | 1.74e-15 | 53 |
hematopoietic cell | 1.93e-14 | 177 |
hematopoietic lineage restricted progenitor cell | 7.21e-13 | 120 |
nongranular leukocyte | 1.80e-12 | 115 |
neutrophil | 3.54e-12 | 3 |
granulocyte | 6.73e-12 | 8 |
eosinophil | 7.96e-09 | 2 |
blood cell | 1.55e-08 | 11 |
Merkel cell | 2.13e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.64e-14 | 15 |
haemolymphatic fluid | 8.64e-14 | 15 |
organism substance | 8.64e-14 | 15 |
hematopoietic system | 1.14e-07 | 98 |
blood island | 1.14e-07 | 98 |
hemolymphoid system | 1.76e-07 | 108 |