FFCP PHASE1:Hg19::chr18:29598416..29598428,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:29598416..29598428,+
|short_description=p4@RNF125
|description=CAGE_peak_4_at_RNF125_5end
|association_with_transcript=-16bp_to_NM_017831,uc002kxf.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54941 | |EntrezGene=54941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21150 | |HGNC=21150 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EQ8 | |UniProt=Q96EQ8 | ||
|association_with_transcript=-16bp_to_NM_017831,uc002kxf.1_5end | |||
|cluster_id=chr18:29598416..29598428,+ | |||
|description=CAGE_peak_4_at_RNF125_5end | |||
|id=chr18:29598416..29598428,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.26e-20!172;CL:0000566!1.26e-20!172;CL:0000738!1.02e-19!140;CL:0002032!2.03e-19!165;CL:0000837!2.03e-19!165;CL:0000988!2.36e-19!182;CL:0002031!8.06e-16!124;CL:0002087!7.31e-14!119;CL:0000791!4.95e-13!18;CL:0000789!4.95e-13!18;CL:0002420!4.95e-13!18;CL:0002419!4.95e-13!18;CL:0000790!4.95e-13!18;CL:0000838!1.26e-12!52;CL:0000542!3.81e-12!53;CL:0000051!3.81e-12!53;CL:0000084!8.85e-11!25;CL:0000827!8.85e-11!25;CL:0000763!1.15e-08!112;CL:0000049!1.15e-08!112;CL:0000990!3.78e-07!8;CL:0000625!4.83e-07!11;CL:0000624!6.45e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.79e-18;18!CL:0000789;1.79e-18;18!CL:0002419;1.79e-18;18!CL:0000624;8.57e-16;6!CL:0000097;1.51e-14;5!CL:0000084;1.75e-12;25!CL:0000542;3.34e-11;53!CL:0000623;7.82e-09;3!CL:0000898;1.19e-08;3!CL:0000236;4.04e-08;13!CL:0000163;7.52e-08;9!CL:0000226;1.18e-07;3!CL:0000842;1.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.91e-18,18;CL:0000789,1.91e-18,18;CL:0002420,1.91e-18,18;CL:0002419,1.91e-18,18;CL:0000790,1.91e-18,18;CL:0000838,4.25e-18,52;CL:0000738,9.87e-18,136;CL:0000542,1.21e-17,53;CL:0000051,1.21e-17,53;CL:0000037,2.53e-17,168;CL:0000624,5.44e-16,6;CL:0000988,7.09e-16,177;CL:0002032,2.30e-15,161;CL:0000837,2.30e-15,161;CL:0000097,1.15e-14,5;CL:0002028,1.15e-14,5;CL:0002031,3.93e-13,120;CL:0000084,1.83e-12,25;CL:0000827,1.83e-12,25;CL:0002087,2.00e-11,115;CL:0000623,9.58e-09,3;CL:0000825,9.58e-09,3;CL:0000898,1.27e-08,3;CL:0000226,5.96e-08,3;CL:0000842,5.96e-08,3;CL:0000163,6.51e-08,9;CL:0000236,9.99e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.79e-18;18!CL:0000051;3.34e-11;53!UBERON:0009117;2.79e-09;10!UBERON:0005564;2.79e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-09!102;UBERON:0003061!1.11e-09!102;UBERON:0002193!2.71e-09!112;UBERON:0007023!3.03e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.25e-12;8!UBERON:0003135;2.31e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.62e-12,8;UBERON:0003135,1.77e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,1.23852898652861,0,0,0.369754010166788,0,0,0.880801318004542,0,1.00272223735071,2.38711957787437,0.447830948479849,0,0.515151135268373,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.561643155732475,0.450530678524519,0.64290234678832,0,0,0.365328307529268,1.75996244461323,1.63841583378639,0.889509253863555,1.70692089026603,1.60158394814405,0.574752439954483,0,2.86216126360609,1.70763890732835,0,1.52909291250092,0,3.36305137788922,1.31692042387539,2.9506465517075,3.93010762749165,2.87842098599313,1.83905144929746,2.28145586643513,4.2610302516126,9.74133642039557,3.56513462032555,2.65145316727353,2.65840673500345,2.97884250141517,5.37983542847836,7.1532641157933,3.4531959966772,3.86890024900188,0.869409257205157,2.37258501059297,2.67540828089713,2.09071047609954,1.35971211237079,2.68254345521345,1.71813722741315,2.02415753615602,0.318565414324097,0.651083453856419,0,0.903450714466637,0.383959833463255,1.24930726552346,1.18388626022008,0.821127996921047,2.21767417547206,3.7441627409691,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,2.48860243445654,0,0,1.29818957461873,0.870648686496336,1.19662164466979,0.476981248610684,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0.662648841607426,0.580969714347592,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,1.42675371031213,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0.738651018262192,0.468008530278475,0.594524649154913,0,0.671928512795438,0.283550194484773,0.179117045405697,0.290633938513962,0,2.95597942737566,6.86777785303163,6.84182781284548,6.05303804351238,8.33200060614108,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,1.00451418286425,0,0,0,0,0,0,0,2.91421374383171,3.34952292343276,2.15627574859517,2.69520376187472,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.2942852049117,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0.330569830721956,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0.507447609232169,0,1.70894156152249,0.952927101831156,1.23408681925858,0,0.540031437238115,0,0.106824071127473,0,0,0,0.144269212976445,0,0.797131363644112,1.79621434289535,2.2980644415884,0.211673582723883,0,0.561594356226918,0.456469358066384,0.156679895773023,0,0.50787533340481,1.4452926759333,1.41259795033733,0.425846237690326,0,0,0.223676107892416,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.557216921387392,0,0,0,0,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0.969332746095218,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0.113942055847001,0,0.179515288819544,0.434589487688032,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0,0,3.89213283814692,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,0.606610196826093,0.802577647298789,0.234264445725339,0.182454789215666,0,0.485560759068186,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.387025325156341,0.365446585430928,0.328461828212837,0.290967049465258,0,0,0.137041924646751,0,0.50648636764703,0,0,0.426905989478705,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0.600420288709789,0.684526894459965,1.27746588066972,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,1.28602518772015,0.687697182986169,1.66176135211674,0.674921674654501,0.77380195455795,0.121499113316049,0,0.157611414598396,0.104909176269996,0.105600336519406,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0,0.439656701034247,0,0.258565912723101,0,0,0,0.320362237703084,0,0,0,0.395223263795889,0,0,1.08803560673895,1.0027595760908,0.306345576763462,1.31149052283922,0.157054096250234,0,0,0.250381861413,0,0,0.248385611765534,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0.779441235357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| ||
|short_description=p4@RNF125 | |||
}} | }} |
Latest revision as of 05:51, 19 September 2015
Short description: | p4@RNF125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF125_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_NM_017831, uc002kxf.1_5end |
EntrezGene: | RNF125 |
HGNC: | 21150 |
UniProt: | Q96EQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.91e-18 | 18 |
alpha-beta T cell | 1.91e-18 | 18 |
immature T cell | 1.91e-18 | 18 |
mature T cell | 1.91e-18 | 18 |
immature alpha-beta T cell | 1.91e-18 | 18 |
lymphoid lineage restricted progenitor cell | 4.25e-18 | 52 |
leukocyte | 9.87e-18 | 136 |
lymphocyte | 1.21e-17 | 53 |
common lymphoid progenitor | 1.21e-17 | 53 |
hematopoietic stem cell | 2.53e-17 | 168 |
CD4-positive, alpha-beta T cell | 5.44e-16 | 6 |
hematopoietic cell | 7.09e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.30e-15 | 161 |
mast cell | 1.15e-14 | 5 |
basophil mast progenitor cell | 1.15e-14 | 5 |
hematopoietic lineage restricted progenitor cell | 3.93e-13 | 120 |
T cell | 1.83e-12 | 25 |
pro-T cell | 1.83e-12 | 25 |
nongranular leukocyte | 2.00e-11 | 115 |
natural killer cell | 9.58e-09 | 3 |
pro-NK cell | 9.58e-09 | 3 |
naive T cell | 1.27e-08 | 3 |
single nucleate cell | 5.96e-08 | 3 |
mononuclear cell | 5.96e-08 | 3 |
endocrine cell | 6.51e-08 | 9 |
B cell | 9.99e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 5.62e-12 | 8 |
male reproductive organ | 1.77e-08 | 11 |