FFCP PHASE1:Hg19::chr14:71787813..71787869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26037 | |EntrezGene=26037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20284 | |HGNC=20284 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4Z3 | |UniProt=G3V4Z3 | ||
|association_with_transcript=-238bp_to_ENST00000557151_5end | |association_with_transcript=-238bp_to_ENST00000557151_5end | ||
|cluster_id=chr14:71787813..71787869,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_SIPA1L1_5end | |description=CAGE_peak_2_at_SIPA1L1_5end | ||
|id=chr14:71787813..71787869,+ | |id=chr14:71787813..71787869,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.38e-27!42;CL:0000860!1.91e-25!45;CL:0000766!3.76e-20!76;CL:0000738!8.82e-19!140;CL:0000557!1.28e-16!71;CL:0002009!9.11e-15!65;CL:0002194!2.23e-14!63;CL:0000576!2.23e-14!63;CL:0000040!2.23e-14!63;CL:0000559!2.23e-14!63;CL:0000839!3.38e-14!70;CL:0002087!3.44e-13!119;CL:0002031!3.59e-13!124 | |ontology_enrichment_celltype=CL:0002057!8.38e-27!42;CL:0000860!1.91e-25!45;CL:0000766!3.76e-20!76;CL:0000738!8.82e-19!140;CL:0000557!1.28e-16!71;CL:0002009!9.11e-15!65;CL:0002194!2.23e-14!63;CL:0000576!2.23e-14!63;CL:0000040!2.23e-14!63;CL:0000559!2.23e-14!63;CL:0000839!3.38e-14!70;CL:0002087!3.44e-13!119;CL:0002031!3.59e-13!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.50e-20;33!CL:0002057;4.50e-20;33!CL:0000576;6.95e-13;48!CL:0000473;2.72e-12;39!CL:0000234;2.72e-12;39!CL:0000766;1.53e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.54e-27,42;CL:0002057,7.54e-27,42;CL:0000473,1.11e-20,48;CL:0000234,1.11e-20,48;CL:0000766,3.70e-20,72;CL:0000738,1.87e-18,136;CL:0000557,1.43e-16,67;CL:0002009,1.04e-14,61;CL:0002194,2.53e-14,59;CL:0000576,2.53e-14,59;CL:0000040,2.53e-14,59;CL:0000559,2.53e-14,59;CL:0000839,4.35e-14,66;CL:0002087,6.97e-13,115;CL:0002031,7.44e-13,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-16!102;UBERON:0003061!1.61e-16!102;UBERON:0004765!6.69e-14!101;UBERON:0001434!6.69e-14!101;UBERON:0001474!7.67e-14!86;UBERON:0002371!8.88e-14!80;UBERON:0002204!5.51e-13!167;UBERON:0002193!6.92e-13!112;UBERON:0007023!5.39e-11!115;UBERON:0001869!8.31e-10!32;UBERON:0001893!2.56e-09!34;UBERON:0003080!6.12e-09!42;UBERON:0001049!6.14e-09!57;UBERON:0005068!6.14e-09!57;UBERON:0006241!6.14e-09!57;UBERON:0007135!6.14e-09!57;UBERON:0002791!6.59e-09!33;UBERON:0002020!6.88e-09!34;UBERON:0003528!6.88e-09!34;UBERON:0002780!9.08e-09!41;UBERON:0001890!9.08e-09!41;UBERON:0006240!9.08e-09!41;UBERON:0002619!7.62e-08!22;UBERON:0002616!1.19e-07!59;UBERON:0002405!1.42e-07!115;UBERON:0000956!2.21e-07!25;UBERON:0000203!2.21e-07!25;UBERON:0001950!3.93e-07!20 | |ontology_enrichment_uberon=UBERON:0002390!1.61e-16!102;UBERON:0003061!1.61e-16!102;UBERON:0004765!6.69e-14!101;UBERON:0001434!6.69e-14!101;UBERON:0001474!7.67e-14!86;UBERON:0002371!8.88e-14!80;UBERON:0002204!5.51e-13!167;UBERON:0002193!6.92e-13!112;UBERON:0007023!5.39e-11!115;UBERON:0001869!8.31e-10!32;UBERON:0001893!2.56e-09!34;UBERON:0003080!6.12e-09!42;UBERON:0001049!6.14e-09!57;UBERON:0005068!6.14e-09!57;UBERON:0006241!6.14e-09!57;UBERON:0007135!6.14e-09!57;UBERON:0002791!6.59e-09!33;UBERON:0002020!6.88e-09!34;UBERON:0003528!6.88e-09!34;UBERON:0002780!9.08e-09!41;UBERON:0001890!9.08e-09!41;UBERON:0006240!9.08e-09!41;UBERON:0002619!7.62e-08!22;UBERON:0002616!1.19e-07!59;UBERON:0002405!1.42e-07!115;UBERON:0000956!2.21e-07!25;UBERON:0000203!2.21e-07!25;UBERON:0001950!3.93e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.34e-09;32!UBERON:0002791;1.42e-08;32!UBERON:0001893;1.43e-08;34!UBERON:0003528;4.37e-08;34!UBERON:0002020;4.37e-08;34!UBERON:0002619;6.31e-08;22!UBERON:0000956;1.66e-07;25!UBERON:0000203;1.66e-07;25!UBERON:0001950;3.31e-07;20!UBERON:0002780;9.69e-07;41!UBERON:0001890;9.69e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.43e-16,98;UBERON:0003061,3.43e-16,98;UBERON:0001474,1.32e-13,82;UBERON:0002371,1.47e-13,76;UBERON:0001434,2.38e-13,100;UBERON:0004765,3.26e-13,90;UBERON:0002204,1.31e-12,167;UBERON:0002193,1.51e-12,108;UBERON:0007023,1.07e-10,114;UBERON:0002405,7.34e-10,93;UBERON:0001869,8.03e-10,32;UBERON:0001893,2.48e-09,34;UBERON:0002791,3.26e-09,32;UBERON:0003528,6.67e-09,34;UBERON:0002020,6.67e-09,34;UBERON:0002780,8.81e-09,41;UBERON:0001890,8.81e-09,41;UBERON:0003080,8.81e-09,41;UBERON:0006240,8.81e-09,41;UBERON:0001049,8.85e-09,56;UBERON:0005068,8.85e-09,56;UBERON:0006241,8.85e-09,56;UBERON:0007135,8.85e-09,56;UBERON:0000073,1.51e-08,53;UBERON:0002616,1.51e-08,53;UBERON:0002619,7.42e-08,22;UBERON:0000956,2.16e-07,25;UBERON:0000203,2.16e-07,25;UBERON:0001950,3.84e-07,20 | |||
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| ||
|short_description=p2@SIPA1L1 | |short_description=p2@SIPA1L1 | ||
}} | }} |
Latest revision as of 21:12, 15 September 2015
Short description: | p2@SIPA1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIPA1L1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -238bp_to_ENST00000557151_5end |
EntrezGene: | SIPA1L1 |
HGNC: | 20284 |
UniProt: | G3V4Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.54e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.54e-27 | 42 |
defensive cell | 1.11e-20 | 48 |
phagocyte | 1.11e-20 | 48 |
myeloid leukocyte | 3.70e-20 | 72 |
leukocyte | 1.87e-18 | 136 |
granulocyte monocyte progenitor cell | 1.43e-16 | 67 |
macrophage dendritic cell progenitor | 1.04e-14 | 61 |
monopoietic cell | 2.53e-14 | 59 |
monocyte | 2.53e-14 | 59 |
monoblast | 2.53e-14 | 59 |
promonocyte | 2.53e-14 | 59 |
myeloid lineage restricted progenitor cell | 4.35e-14 | 66 |
nongranular leukocyte | 6.97e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.44e-13 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.43e-16 | 98 |
blood island | 3.43e-16 | 98 |
bone element | 1.32e-13 | 82 |
bone marrow | 1.47e-13 | 76 |
skeletal system | 2.38e-13 | 100 |
skeletal element | 3.26e-13 | 90 |
musculoskeletal system | 1.31e-12 | 167 |
hemolymphoid system | 1.51e-12 | 108 |
adult organism | 1.07e-10 | 114 |
immune system | 7.34e-10 | 93 |
cerebral hemisphere | 8.03e-10 | 32 |
telencephalon | 2.48e-09 | 34 |
regional part of telencephalon | 3.26e-09 | 32 |
brain grey matter | 6.67e-09 | 34 |
gray matter | 6.67e-09 | 34 |
regional part of forebrain | 8.81e-09 | 41 |
forebrain | 8.81e-09 | 41 |
anterior neural tube | 8.81e-09 | 41 |
future forebrain | 8.81e-09 | 41 |
neural tube | 8.85e-09 | 56 |
neural rod | 8.85e-09 | 56 |
future spinal cord | 8.85e-09 | 56 |
neural keel | 8.85e-09 | 56 |
regional part of nervous system | 1.51e-08 | 53 |
regional part of brain | 1.51e-08 | 53 |
regional part of cerebral cortex | 7.42e-08 | 22 |
cerebral cortex | 2.16e-07 | 25 |
pallium | 2.16e-07 | 25 |
neocortex | 3.84e-07 | 20 |