FFCP PHASE1:Hg19::chr18:25757224..25757232,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:25757224..25757232,-
|short_description=p19@CDH2
|description=CAGE_peak_19_at_CDH2_5end
|association_with_transcript=177bp_to_ENST00000269141_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt=P19022 | |UniProt=P19022 | ||
|association_with_transcript=177bp_to_ENST00000269141_5end | |||
|cluster_id=chr18:25757224..25757232,- | |||
|description=CAGE_peak_19_at_CDH2_5end | |||
|id=chr18:25757224..25757232,- | |||
|ontology_enrichment_celltype=CL:0000055!4.55e-14!180;CL:0000359!9.53e-13!32;CL:0002334!2.26e-09!12;CL:0000680!5.53e-09!57;CL:0000056!5.53e-09!57;CL:0000355!5.53e-09!57;CL:0000192!1.23e-08!42;CL:0000514!1.23e-08!42;CL:0000057!4.97e-08!75;CL:0000187!1.69e-07!54;CL:0000222!2.89e-07!119;CL:0000393!3.02e-07!60;CL:0000211!3.02e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.30e-17;32!CL:0002594;3.05e-14;4!CL:0002589;5.46e-14;2!CL:0000192;1.16e-09;43!CL:0002580;4.85e-09;3!CL:0002568;2.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.67e-18,32;CL:0002594,2.62e-14,4;CL:0002589,5.17e-14,2;CL:0000192,7.31e-13,43;CL:0000514,7.31e-13,43;CL:0000187,1.15e-09,55;CL:0000680,4.47e-09,58;CL:0000056,4.47e-09,58;CL:0000355,4.47e-09,58;CL:0002580,5.97e-09,3;CL:0000393,1.53e-08,61;CL:0000211,1.53e-08,61;CL:0002568,1.95e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.16e-09;43!UBERON:0010226;2.13e-07;1!UBERON:0004140;2.13e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;2.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,4.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004872!7.87e-14!84;UBERON:0003914!1.77e-12!118;UBERON:0001981!3.07e-12!60;UBERON:0007500!3.07e-12!60;UBERON:0004537!3.07e-12!60;UBERON:0006965!3.07e-12!60;UBERON:0001637!3.40e-12!42;UBERON:0003509!3.40e-12!42;UBERON:0004572!3.40e-12!42;UBERON:0000025!4.08e-11!194;UBERON:0001009!4.19e-11!113;UBERON:0004535!5.33e-11!110;UBERON:0002049!7.14e-11!79;UBERON:0007798!7.14e-11!79;UBERON:0004573!1.19e-10!33;UBERON:0004571!1.19e-10!33;UBERON:0000055!5.77e-10!69;UBERON:0000948!1.71e-08!24;UBERON:0005498!1.71e-08!24;UBERON:0004140!1.71e-08!24;UBERON:0009881!1.71e-08!24;UBERON:0004141!1.71e-08!24;UBERON:0003084!1.71e-08!24;UBERON:0007005!1.71e-08!24;UBERON:0004139!1.71e-08!24;UBERON:0004291!1.71e-08!24;UBERON:0000483!2.61e-08!309;UBERON:0000119!2.81e-08!312;UBERON:0007100!2.88e-08!27;UBERON:0001134!8.39e-08!61;UBERON:0002036!8.39e-08!61;UBERON:0003082!8.39e-08!61;UBERON:0000475!9.29e-08!365;UBERON:0000477!1.80e-07!286;UBERON:0002385!2.80e-07!63;UBERON:0001015!2.80e-07!63;UBERON:0000383!2.80e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;3.05e-14;4!UBERON:0001637;4.55e-14;42!UBERON:0003509;4.55e-14;42!UBERON:0004572;4.55e-14;42!UBERON:0001529;5.46e-14;2!UBERON:0007204;5.46e-14;2!UBERON:0004573;1.35e-12;33!UBERON:0004571;1.35e-12;33!UBERON:0007100;2.66e-08;25!UBERON:0002084;2.13e-07;1!UBERON:0002082;2.13e-07;1!UBERON:0007500;3.19e-07;56!UBERON:0001981;3.19e-07;56!UBERON:0004537;3.19e-07;56!UBERON:0000947;4.01e-07;21!UBERON:0010191;4.01e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.75e-19,42;UBERON:0003509,4.75e-19,42;UBERON:0004572,4.75e-19,42;UBERON:0004872,1.03e-15,83;UBERON:0001310,2.62e-14,4;UBERON:0001009,4.49e-14,112;UBERON:0001529,5.17e-14,2;UBERON:0007204,5.17e-14,2;UBERON:0004573,5.42e-14,33;UBERON:0004571,5.42e-14,33;UBERON:0003914,2.78e-13,117;UBERON:0007500,6.91e-13,59;UBERON:0001981,6.91e-13,59;UBERON:0004537,6.91e-13,59;UBERON:0006965,6.91e-13,59;UBERON:0004535,9.10e-13,109;UBERON:0000055,7.11e-11,68;UBERON:0002049,7.52e-11,78;UBERON:0007798,7.52e-11,78;UBERON:0000025,1.33e-08,192;UBERON:0001134,2.24e-08,62;UBERON:0002036,2.24e-08,62;UBERON:0003082,2.24e-08,62;UBERON:0002385,4.63e-08,64;UBERON:0001015,4.63e-08,64;UBERON:0000383,4.63e-08,64;UBERON:0007100,1.15e-07,27;UBERON:0002084,2.50e-07,1;UBERON:0002082,2.50e-07,1;UBERON:0010226,2.50e-07,1;UBERON:0000947,3.40e-07,21;UBERON:0010191,3.40e-07,21;UBERON:0002329,4.28e-07,71;UBERON:0003059,4.28e-07,71;UBERON:0007282,4.28e-07,71;UBERON:0004290,4.28e-07,71;UBERON:0009618,4.28e-07,71;UBERON:0003077,5.67e-07,72;UBERON:0007285,5.67e-07,72;UBERON:0007524,7.46e-07,73 | |||
|phase1_expression=0.54503513781167,0,1.40954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,1.46379839637152,0,0,0,0.85870796139317,0.273748850145768,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0.189069634328136,0.886917589850256,1.14185221401064,0,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0.39752481473341,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.662045904066094,1.43418310374407,0,1.12135520028461,0,1.97334038733728,0.933633106199299,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.680593098960126,0.179389635688862,0.427114777637135,0,0.300091096084402,0.103052529238439,0.515281080091258,0.558350568994769,1.68776332241266,0.487185025805993,0.757301322732344,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0.482022059766964,0.220587945464788,0.217879444092406,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.939269553886573,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,1.42198887333556,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0.355391948742546,0,1.20575750823834,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0.737476674166813,0,0,0,0,0,0,0,0,0,1.48864684691266,1.07423381301644,0.841980283299221,0.896974044789907,0.511707249066704,1.28683136914886,0,0.308419387605311,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.34444334449382,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.464845549297286,2.20368642781448,0,1.84820148105653,0.532306030317022,0,2.03856641014312,2.57624796135584,0,0.316379424718726,0,0,0,0.636406495851874,0.78494864019923,0,0,0,0.606547444719948,1.58510321173008,0.842516912477962,0,0.487426979262569,3.16950440270266,0,0.141405431953713,0,0,0,0.438450885253763,0,0,1.62328301570163,0,1.12678241012897,0.286822704408103,0.392996164052485,1.426684205925,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0.295547618953547,0.658156191461918,0,0,0.0769502585037971,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.443175571691151,0,0,0,0,0,0,0.343189995723929,0,0,0,0.407712618220842,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0.458320848023367,0,0,0,2.00854311697685,1.20930250476107,0.720599767084807,1.16495949527454,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0.303747783290123,0,0.0788057072991982,0.262272940674991,0,0,0.191915197319445,0,1.32418394073086,0,0,0.864221491201268,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0.138348634936231,0.249960815924213,0.303298235083296,0,0,0.468334905806882,0.144921028610825,0.298509605773748,0.467426619694449,0.554805861502613,0,0.251567901752575,0,0,0,0.466311601748341,0.443565449968902,0.796483835818512,0,1.55262956876259,0,0.53168342911599,0.521745061811734,1.05180326298053,0.380805212168795,0.813741466409323,0.363697318405119,0.537052785212442,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0.71635536432595,0,0.219284049578707,0,0,0.337884881306145,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,1.41696576325585,0,0.615349092722265,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0.394636641377094,0,0,0,0.157115589916002,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p19@CDH2 | |||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p19@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 177bp_to_ENST00000269141_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | P19022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.67e-18 | 32 |
smooth muscle cell of the umbilical artery | 2.62e-14 | 4 |
smooth muscle cell of the brachiocephalic vasculature | 5.17e-14 | 2 |
smooth muscle cell | 7.31e-13 | 43 |
smooth muscle myoblast | 7.31e-13 | 43 |
muscle cell | 1.15e-09 | 55 |
muscle precursor cell | 4.47e-09 | 58 |
myoblast | 4.47e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.47e-09 | 58 |
preadipocyte of the breast | 5.97e-09 | 3 |
electrically responsive cell | 1.53e-08 | 61 |
electrically active cell | 1.53e-08 | 61 |
mesenchymal stem cell of Wharton's jelly | 1.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 4.90e-07 | 1 |