FFCP PHASE1:Hg19::chr13:74666129..74666133,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74666129..74666133,- | |||
|coexpression_cluster_id=C119 | |coexpression_cluster_id=C119 | ||
|description=CAGE_peak_at_chr13:74666129..74666133,- | |description=CAGE_peak_at_chr13:74666129..74666133,- | ||
|id=chr13:74666129..74666133,- | |id=chr13:74666129..74666133,- | ||
|ontology_enrichment_celltype=CL:0000542!1.88e-07!53;CL:0000051!1.88e-07!53;CL:0000080!2.08e-07!6;CL:0000838!6.62e-07!52 | |ontology_enrichment_celltype=CL:0000542!1.88e-07!53;CL:0000051!1.88e-07!53;CL:0000080!2.08e-07!6;CL:0000838!6.62e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000623;9.38e-27;3!CL:0000791;2.53e-17;18!CL:0000789;2.53e-17;18!CL:0002419;2.53e-17;18!CL:0000624;5.26e-14;6!CL:0000542;1.84e-12;53!CL:0000084;2.38e-12;25!CL:0000625;8.72e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.25e-27,3;CL:0000825,4.25e-27,3;CL:0000838,2.53e-22,52;CL:0000542,7.26e-22,53;CL:0000051,7.26e-22,53;CL:0000791,2.92e-17,18;CL:0000789,2.92e-17,18;CL:0002420,2.92e-17,18;CL:0002419,2.92e-17,18;CL:0000790,2.92e-17,18;CL:0000624,5.15e-14,6;CL:0002087,2.09e-12,115;CL:0000084,2.64e-12,25;CL:0000827,2.64e-12,25;CL:0000738,3.91e-10,136;CL:0002031,4.92e-10,120;CL:0000037,9.33e-08,168;CL:0000625,9.91e-08,11;CL:0000988,3.05e-07,177;CL:0002032,6.21e-07,161;CL:0000837,6.21e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.53e-17;18!CL:0000051;1.84e-12;53!UBERON:0000358;2.97e-10;1!UBERON:0001045;6.91e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.63e-08!15;UBERON:0000179!6.63e-08!15;UBERON:0000463!6.63e-08!15 | |ontology_enrichment_uberon=UBERON:0000178!6.63e-08!15;UBERON:0000179!6.63e-08!15;UBERON:0000463!6.63e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;6.91e-10;1!UBERON:0001153;6.91e-10;1!UBERON:0009854;6.91e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.33e-10,1;UBERON:0001153,6.33e-10,1;UBERON:0001045,6.33e-10,1 | |||
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| ||
|short_description=p@chr13:74666129..74666133,- | |short_description=p@chr13:74666129..74666133,- | ||
}} | }} |
Latest revision as of 17:03, 24 July 2015
Short description: | p@chr13:74666129..74666133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74666129..74666133, - |
Coexpression cluster: | C119_CD4_CD8_Natural_Neutrophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.25e-27 | 3 |
pro-NK cell | 4.25e-27 | 3 |
lymphoid lineage restricted progenitor cell | 2.53e-22 | 52 |
lymphocyte | 7.26e-22 | 53 |
common lymphoid progenitor | 7.26e-22 | 53 |
mature alpha-beta T cell | 2.92e-17 | 18 |
alpha-beta T cell | 2.92e-17 | 18 |
immature T cell | 2.92e-17 | 18 |
mature T cell | 2.92e-17 | 18 |
immature alpha-beta T cell | 2.92e-17 | 18 |
CD4-positive, alpha-beta T cell | 5.15e-14 | 6 |
nongranular leukocyte | 2.09e-12 | 115 |
T cell | 2.64e-12 | 25 |
pro-T cell | 2.64e-12 | 25 |
leukocyte | 3.91e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.92e-10 | 120 |
hematopoietic stem cell | 9.33e-08 | 168 |
CD8-positive, alpha-beta T cell | 9.91e-08 | 11 |
hematopoietic cell | 3.05e-07 | 177 |
hematopoietic oligopotent progenitor cell | 6.21e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.21e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.33e-10 | 1 |
caecum | 6.33e-10 | 1 |
midgut | 6.33e-10 | 1 |