FFCP PHASE1:Hg19::chr13:72516905..72516908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:72516905..72516908,+ | |||
|coexpression_cluster_id=C661 | |coexpression_cluster_id=C661 | ||
|description=CAGE_peak_at_chr13:72516905..72516908,+ | |description=CAGE_peak_at_chr13:72516905..72516908,+ | ||
|id=chr13:72516905..72516908,+ | |id=chr13:72516905..72516908,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.13e-28!42;CL:0000860!1.02e-26!45;CL:0002194!5.87e-23!63;CL:0000576!5.87e-23!63;CL:0000040!5.87e-23!63;CL:0000559!5.87e-23!63;CL:0002009!3.08e-22!65;CL:0000839!1.30e-20!70;CL:0000557!2.57e-20!71;CL:0000766!6.08e-19!76;CL:0000763!1.93e-18!112;CL:0000049!1.93e-18!112;CL:0002032!3.29e-12!165;CL:0000837!3.29e-12!165;CL:0002087!7.89e-12!119;CL:0000037!1.14e-11!172;CL:0000566!1.14e-11!172;CL:0002031!2.56e-11!124;CL:0000988!5.73e-11!182;CL:0000738!6.38e-10!140 | |ontology_enrichment_celltype=CL:0002057!1.13e-28!42;CL:0000860!1.02e-26!45;CL:0002194!5.87e-23!63;CL:0000576!5.87e-23!63;CL:0000040!5.87e-23!63;CL:0000559!5.87e-23!63;CL:0002009!3.08e-22!65;CL:0000839!1.30e-20!70;CL:0000557!2.57e-20!71;CL:0000766!6.08e-19!76;CL:0000763!1.93e-18!112;CL:0000049!1.93e-18!112;CL:0002032!3.29e-12!165;CL:0000837!3.29e-12!165;CL:0002087!7.89e-12!119;CL:0000037!1.14e-11!172;CL:0000566!1.14e-11!172;CL:0002031!2.56e-11!124;CL:0000988!5.73e-11!182;CL:0000738!6.38e-10!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.53e-19;33!CL:0002057;5.53e-19;33!CL:0000473;1.48e-12;39!CL:0000234;1.48e-12;39!CL:0000576;1.57e-11;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-15,42;CL:0002057,1.01e-15,42;CL:0000473,7.54e-14,48;CL:0000234,7.54e-14,48;CL:0002194,3.21e-11,59;CL:0000576,3.21e-11,59;CL:0000040,3.21e-11,59;CL:0000559,3.21e-11,59;CL:0002009,7.02e-11,61;CL:0000839,4.06e-10,66;CL:0000557,5.60e-10,67;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0000766,2.44e-09,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.27e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.78e-18!80;UBERON:0001474!1.15e-16!86;UBERON:0004765!4.40e-14!101;UBERON:0001434!4.40e-14!101;UBERON:0002390!6.16e-14!102;UBERON:0003061!6.16e-14!102;UBERON:0002193!1.27e-12!112;UBERON:0002405!2.86e-12!115;UBERON:0002204!3.67e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!5.78e-18!80;UBERON:0001474!1.15e-16!86;UBERON:0004765!4.40e-14!101;UBERON:0001434!4.40e-14!101;UBERON:0002390!6.16e-14!102;UBERON:0003061!6.16e-14!102;UBERON:0002193!1.27e-12!112;UBERON:0002405!2.86e-12!115;UBERON:0002204!3.67e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.93e-09,76;UBERON:0001474,2.75e-08,82;UBERON:0004765,1.31e-07,90;UBERON:0002405,2.19e-07,93;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98;UBERON:0001434,6.51e-07,100 | |||
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|short_description=p@chr13:72516905..72516908,+ | |short_description=p@chr13:72516905..72516908,+ | ||
}} | }} |
Latest revision as of 16:59, 24 July 2015
Short description: | p@chr13:72516905..72516908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:72516905..72516908, + |
Coexpression cluster: | C661_acute_lung_Dendritic_placenta_granulocyte_Adipocyte_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-15 | 42 |
defensive cell | 7.54e-14 | 48 |
phagocyte | 7.54e-14 | 48 |
monopoietic cell | 3.21e-11 | 59 |
monocyte | 3.21e-11 | 59 |
monoblast | 3.21e-11 | 59 |
promonocyte | 3.21e-11 | 59 |
macrophage dendritic cell progenitor | 7.02e-11 | 61 |
myeloid lineage restricted progenitor cell | 4.06e-10 | 66 |
granulocyte monocyte progenitor cell | 5.60e-10 | 67 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
myeloid leukocyte | 2.44e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.93e-09 | 76 |
bone element | 2.75e-08 | 82 |
skeletal element | 1.31e-07 | 90 |
immune system | 2.19e-07 | 93 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
skeletal system | 6.51e-07 | 100 |