FFCP PHASE1:Hg19::chr13:46275503..46275539,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:46275503..46275539,- | |||
|coexpression_cluster_id=C99 | |coexpression_cluster_id=C99 | ||
|description=CAGE_peak_at_chr13:46275503..46275539,- | |description=CAGE_peak_at_chr13:46275503..46275539,- | ||
|id=chr13:46275503..46275539,- | |id=chr13:46275503..46275539,- | ||
|ontology_enrichment_celltype=CL:0000080!8.86e-11!6;CL:0000945!2.63e-09!24;CL:0000826!2.63e-09!24;CL:0000838!5.35e-07!52;CL:0000988!6.40e-07!182;CL:0000542!7.62e-07!53;CL:0000051!7.62e-07!53 | |ontology_enrichment_celltype=CL:0000080!8.86e-11!6;CL:0000945!2.63e-09!24;CL:0000826!2.63e-09!24;CL:0000838!5.35e-07!52;CL:0000988!6.40e-07!182;CL:0000542!7.62e-07!53;CL:0000051!7.62e-07!53 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.37e-12;10!UBERON:0007687;2.37e-12;10 | |||
|ontology_enrichment_disease=DOID:0060060!3.10e-08!1;DOID:0060061!3.10e-08!1;DOID:8691!3.10e-08!1;DOID:630!4.66e-08!1;DOID:0050177!4.66e-08!1;DOID:0050427!4.66e-08!1;DOID:4960!1.44e-07!1;DOID:0070004!1.44e-07!1 | |ontology_enrichment_disease=DOID:0060060!3.10e-08!1;DOID:0060061!3.10e-08!1;DOID:8691!3.10e-08!1;DOID:630!4.66e-08!1;DOID:0050177!4.66e-08!1;DOID:0050427!4.66e-08!1;DOID:4960!1.44e-07!1;DOID:0070004!1.44e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.54e-29;1!DOID:0060061;1.54e-29;1!DOID:8691;1.54e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.33e-29,1;DOID:0060061,1.33e-29,1;DOID:8691,1.33e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002134!5.33e-08!1;UBERON:0005208!5.33e-08!1;UBERON:0005946!5.33e-08!1;UBERON:0005965!5.33e-08!1;UBERON:0002078!5.33e-08!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | |ontology_enrichment_uberon=UBERON:0002134!5.33e-08!1;UBERON:0005208!5.33e-08!1;UBERON:0005946!5.33e-08!1;UBERON:0005965!5.33e-08!1;UBERON:0002078!5.33e-08!1;UBERON:0002363!1.99e-07!1;UBERON:0007647!1.99e-07!1;UBERON:0010115!1.99e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.28e-26;10!UBERON:0000178;1.42e-17;15!UBERON:0000179;1.42e-17;15!UBERON:0000463;1.42e-17;15!UBERON:0000478;2.85e-11;24!UBERON:0002390;1.04e-08;32!UBERON:0000922;2.84e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.56e-26,10;UBERON:0000358,6.56e-26,10;UBERON:0000307,6.56e-26,10;UBERON:0000091,6.56e-26,10;UBERON:0000087,6.56e-26,10;UBERON:0007010,6.56e-26,10;UBERON:0007806,6.56e-26,10;UBERON:0008780,6.56e-26,10;UBERON:0005728,6.56e-26,10;UBERON:0000178,1.46e-17,15;UBERON:0000179,1.46e-17,15;UBERON:0000463,1.46e-17,15;UBERON:0000478,2.90e-11,24 | |||
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|short_description=p@chr13:46275503..46275539,- | |short_description=p@chr13:46275503..46275539,- | ||
}} | }} |
Latest revision as of 16:17, 24 July 2015
Short description: | p@chr13:46275503..46275539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:46275503..46275539, - |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.56e-26 | 10 |
blastocyst | 6.56e-26 | 10 |
blastula | 6.56e-26 | 10 |
bilaminar disc | 6.56e-26 | 10 |
inner cell mass | 6.56e-26 | 10 |
cleaving embryo | 6.56e-26 | 10 |
connecting stalk | 6.56e-26 | 10 |
inner cell mass derived epiblast | 6.56e-26 | 10 |
extraembryonic mesoderm | 6.56e-26 | 10 |
blood | 1.46e-17 | 15 |
haemolymphatic fluid | 1.46e-17 | 15 |
organism substance | 1.46e-17 | 15 |
extraembryonic structure | 2.90e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.33e-29 | 1 |
cutaneous T cell lymphoma | 1.33e-29 | 1 |
mycosis fungoides | 1.33e-29 | 1 |