FFCP PHASE1:Hg19::chr13:38171411..38171427,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38171411..38171427,- | |||
|coexpression_cluster_id=C349 | |coexpression_cluster_id=C349 | ||
|description=CAGE_peak_at_chr13:38171411..38171427,- | |description=CAGE_peak_at_chr13:38171411..38171427,- | ||
|id=chr13:38171411..38171427,- | |id=chr13:38171411..38171427,- | ||
|ontology_enrichment_celltype=CL:0000055!2.23e-22!180;CL:0000680!9.35e-13!57;CL:0000056!9.35e-13!57;CL:0000355!9.35e-13!57;CL:0000057!2.07e-12!75;CL:0000187!1.31e-11!54;CL:0002334!1.56e-11!12;CL:0000183!5.37e-10!59;CL:0002494!8.78e-10!16;CL:0000393!1.04e-09!60;CL:0000211!1.04e-09!60;CL:0000188!1.28e-07!9;CL:0002548!5.12e-07!6 | |ontology_enrichment_celltype=CL:0000055!2.23e-22!180;CL:0000680!9.35e-13!57;CL:0000056!9.35e-13!57;CL:0000355!9.35e-13!57;CL:0000057!2.07e-12!75;CL:0000187!1.31e-11!54;CL:0002334!1.56e-11!12;CL:0000183!5.37e-10!59;CL:0002494!8.78e-10!16;CL:0000393!1.04e-09!60;CL:0000211!1.04e-09!60;CL:0000188!1.28e-07!9;CL:0002548!5.12e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.68e-16;6!CL:0002494;8.32e-15;16!CL:0002580;1.04e-12;3!CL:0002579;3.06e-12;3!CL:0002334;2.61e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,2.03e-16,6;CL:0002494,9.74e-15,16;CL:0002580,1.47e-12,3;CL:0002579,3.97e-12,3;CL:0002334,3.48e-11,12;CL:0000057,1.13e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1192;7.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,7.81e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.66e-14!61;UBERON:0002036!9.66e-14!61;UBERON:0003082!9.66e-14!61;UBERON:0002385!5.08e-13!63;UBERON:0001015!5.08e-13!63;UBERON:0000383!5.08e-13!63;UBERON:0004290!7.56e-11!70;UBERON:0000914!2.41e-10!83;UBERON:0002329!2.41e-10!83;UBERON:0003077!2.41e-10!83;UBERON:0003059!2.41e-10!83;UBERON:0007282!2.41e-10!83;UBERON:0009618!2.41e-10!83;UBERON:0007285!2.41e-10!83;UBERON:0000948!2.49e-09!24;UBERON:0005498!2.49e-09!24;UBERON:0004140!2.49e-09!24;UBERON:0009881!2.49e-09!24;UBERON:0004141!2.49e-09!24;UBERON:0003084!2.49e-09!24;UBERON:0007005!2.49e-09!24;UBERON:0004139!2.49e-09!24;UBERON:0004291!2.49e-09!24;UBERON:0000486!8.92e-09!82;UBERON:0004872!2.99e-08!84;UBERON:0007100!7.11e-08!27;UBERON:0001637!8.26e-08!42;UBERON:0003509!8.26e-08!42;UBERON:0004572!8.26e-08!42;UBERON:0004573!1.17e-07!33;UBERON:0004571!1.17e-07!33 | |ontology_enrichment_uberon=UBERON:0001134!9.66e-14!61;UBERON:0002036!9.66e-14!61;UBERON:0003082!9.66e-14!61;UBERON:0002385!5.08e-13!63;UBERON:0001015!5.08e-13!63;UBERON:0000383!5.08e-13!63;UBERON:0004290!7.56e-11!70;UBERON:0000914!2.41e-10!83;UBERON:0002329!2.41e-10!83;UBERON:0003077!2.41e-10!83;UBERON:0003059!2.41e-10!83;UBERON:0007282!2.41e-10!83;UBERON:0009618!2.41e-10!83;UBERON:0007285!2.41e-10!83;UBERON:0000948!2.49e-09!24;UBERON:0005498!2.49e-09!24;UBERON:0004140!2.49e-09!24;UBERON:0009881!2.49e-09!24;UBERON:0004141!2.49e-09!24;UBERON:0003084!2.49e-09!24;UBERON:0007005!2.49e-09!24;UBERON:0004139!2.49e-09!24;UBERON:0004291!2.49e-09!24;UBERON:0000486!8.92e-09!82;UBERON:0004872!2.99e-08!84;UBERON:0007100!7.11e-08!27;UBERON:0001637!8.26e-08!42;UBERON:0003509!8.26e-08!42;UBERON:0004572!8.26e-08!42;UBERON:0004573!1.17e-07!33;UBERON:0004571!1.17e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;2.03e-10;22!UBERON:0007100;5.14e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.73e-12,24;UBERON:0005498,5.73e-12,24;UBERON:0004140,5.73e-12,24;UBERON:0009881,5.73e-12,24;UBERON:0004141,5.73e-12,24;UBERON:0003084,5.73e-12,24;UBERON:0007005,5.73e-12,24;UBERON:0004139,5.73e-12,24;UBERON:0004291,5.73e-12,24;UBERON:0007100,1.84e-10,27 | |||
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| ||
|short_description=p@chr13:38171411..38171427,- | |short_description=p@chr13:38171411..38171427,- | ||
}} | }} |
Latest revision as of 15:54, 24 July 2015
Short description: | p@chr13:38171411..38171427, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38171411..38171427, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 2.03e-16 | 6 |
cardiocyte | 9.74e-15 | 16 |
preadipocyte of the breast | 1.47e-12 | 3 |
omentum preadipocyte | 3.97e-12 | 3 |
preadipocyte | 3.48e-11 | 12 |
fibroblast | 1.13e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
heart | 5.73e-12 | 24 |
primitive heart tube | 5.73e-12 | 24 |
primary heart field | 5.73e-12 | 24 |
anterior lateral plate mesoderm | 5.73e-12 | 24 |
heart tube | 5.73e-12 | 24 |
heart primordium | 5.73e-12 | 24 |
cardiac mesoderm | 5.73e-12 | 24 |
cardiogenic plate | 5.73e-12 | 24 |
heart rudiment | 5.73e-12 | 24 |
primary circulatory organ | 1.84e-10 | 27 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 7.81e-07 | 3 |