FFCP PHASE1:Hg19::chr13:38083855..38083873,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:38083855..38083873,+ | |||
|coexpression_cluster_id=C231 | |coexpression_cluster_id=C231 | ||
|description=CAGE_peak_at_chr13:38083855..38083873,+ | |description=CAGE_peak_at_chr13:38083855..38083873,+ | ||
|id=chr13:38083855..38083873,+ | |id=chr13:38083855..38083873,+ | ||
|ontology_enrichment_celltype=CL:1000306!3.71e-12!4;CL:0002547!3.71e-12!4;CL:0002594!3.71e-12!4;CL:0000077!2.08e-09!19;CL:0002579!9.55e-08!3;CL:0002622!1.80e-07!3 | |ontology_enrichment_celltype=CL:1000306!3.71e-12!4;CL:0002547!3.71e-12!4;CL:0002594!3.71e-12!4;CL:0000077!2.08e-09!19;CL:0002579!9.55e-08!3;CL:0002622!1.80e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.38e-17;4!CL:0002547;2.38e-17;4!CL:0000077;1.28e-08;19!CL:0000134;6.23e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.02e-17,4;CL:0002547,2.02e-17,4;CL:0000077,1.28e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.05e-29!14;DOID:120!3.33e-14!27;DOID:193!4.10e-13!29 | |ontology_enrichment_disease=DOID:2394!7.05e-29!14;DOID:120!3.33e-14!27;DOID:193!4.10e-13!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.09e-42;14!DOID:120;8.66e-22;27!DOID:193;2.78e-20;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.67e-42,14;DOID:120,9.15e-22,27;DOID:193,2.93e-20,29 | |||
|ontology_enrichment_uberon=UBERON:0000415!3.71e-12!4;UBERON:0007240!3.71e-12!4;UBERON:0005742!3.71e-12!4;UBERON:0005734!3.71e-12!4;UBERON:0004664!3.71e-12!4;UBERON:0001310!3.71e-12!4;UBERON:0002119!3.71e-12!4;UBERON:0004531!3.71e-12!4;UBERON:0004663!3.71e-12!4;UBERON:0000992!6.91e-10!13 | |ontology_enrichment_uberon=UBERON:0000415!3.71e-12!4;UBERON:0007240!3.71e-12!4;UBERON:0005742!3.71e-12!4;UBERON:0005734!3.71e-12!4;UBERON:0004664!3.71e-12!4;UBERON:0001310!3.71e-12!4;UBERON:0002119!3.71e-12!4;UBERON:0004531!3.71e-12!4;UBERON:0004663!3.71e-12!4;UBERON:0000992!6.91e-10!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.28e-20;13!UBERON:0004797;2.38e-17;4!UBERON:0000415;2.38e-17;4!UBERON:0007240;2.38e-17;4!UBERON:0005742;2.38e-17;4!UBERON:0005734;2.38e-17;4!UBERON:0004664;2.38e-17;4!UBERON:0002119;2.38e-17;4!UBERON:0004663;2.38e-17;4!UBERON:0002118;2.76e-14;5!UBERON:0000991;6.54e-13;21!UBERON:0003134;2.08e-08;33!UBERON:0003100;6.22e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.42e-20,13;UBERON:0000415,2.02e-17,4;UBERON:0007240,2.02e-17,4;UBERON:0005742,2.02e-17,4;UBERON:0005734,2.02e-17,4;UBERON:0004664,2.02e-17,4;UBERON:0004663,2.02e-17,4;UBERON:0002119,2.82e-17,4;UBERON:0002118,2.76e-14,5;UBERON:0000991,6.96e-13,21;UBERON:0009196,6.96e-13,21;UBERON:0009117,6.96e-13,21;UBERON:0005564,6.96e-13,21;UBERON:0004176,2.59e-12,22;UBERON:0004797,2.24e-10,7;UBERON:0003134,1.96e-07,37;UBERON:0000474,1.96e-07,37;UBERON:0003100,9.87e-07,41 | |||
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|short_description=p@chr13:38083855..38083873,+ | |short_description=p@chr13:38083855..38083873,+ | ||
}} | }} |
Latest revision as of 15:52, 24 July 2015
Short description: | p@chr13:38083855..38083873, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38083855..38083873, + |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.02e-17 | 4 |
fibroblast of the aortic adventitia | 2.02e-17 | 4 |
mesothelial cell | 1.28e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.42e-20 | 13 |
artery wall | 2.02e-17 | 4 |
tunica adventitia of artery | 2.02e-17 | 4 |
adventitia | 2.02e-17 | 4 |
tunica adventitia of blood vessel | 2.02e-17 | 4 |
aorta tunica adventitia | 2.02e-17 | 4 |
aorta wall | 2.02e-17 | 4 |
left ovary | 2.82e-17 | 4 |
right ovary | 2.76e-14 | 5 |
gonad | 6.96e-13 | 21 |
indifferent external genitalia | 6.96e-13 | 21 |
indifferent gonad | 6.96e-13 | 21 |
gonad primordium | 6.96e-13 | 21 |
external genitalia | 2.59e-12 | 22 |
blood vessel layer | 2.24e-10 | 7 |
female reproductive organ | 1.96e-07 | 37 |
female reproductive system | 1.96e-07 | 37 |
female organism | 9.87e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.67e-42 | 14 |
female reproductive organ cancer | 9.15e-22 | 27 |
reproductive organ cancer | 2.93e-20 | 29 |