FFCP PHASE1:Hg19::chr13:29004291..29004302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:29004291..29004302,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_at_chr13:29004291..29004302,- | |description=CAGE_peak_at_chr13:29004291..29004302,- | ||
|id=chr13:29004291..29004302,- | |id=chr13:29004291..29004302,- | ||
|ontology_enrichment_celltype=CL:0000945!1.15e-53!24;CL:0000826!1.15e-53!24;CL:0000236!1.30e-32!14;CL:0000542!4.71e-25!53;CL:0000051!4.71e-25!53;CL:0000838!1.39e-22!52;CL:0002087!1.70e-12!119;CL:0002031!1.84e-10!124;CL:0000738!6.36e-10!140;CL:0002032!9.93e-08!165;CL:0000837!9.93e-08!165;CL:0000817!1.84e-07!3;CL:0002541!2.02e-07!3;CL:0000037!3.12e-07!172;CL:0000566!3.12e-07!172 | |ontology_enrichment_celltype=CL:0000945!1.15e-53!24;CL:0000826!1.15e-53!24;CL:0000236!1.30e-32!14;CL:0000542!4.71e-25!53;CL:0000051!4.71e-25!53;CL:0000838!1.39e-22!52;CL:0002087!1.70e-12!119;CL:0002031!1.84e-10!124;CL:0000738!6.36e-10!140;CL:0002032!9.93e-08!165;CL:0000837!9.93e-08!165;CL:0000817!1.84e-07!3;CL:0002541!2.02e-07!3;CL:0000037!3.12e-07!172;CL:0000566!3.12e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.24e-50;24!CL:0000236;9.10e-42;13!CL:0002541;4.45e-21;3!CL:0000542;7.45e-19;53!CL:0000817;1.93e-16;1!CL:0000785;1.93e-16;1!CL:0000819;1.93e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.87e-51,24;CL:0000826,9.87e-51,24;CL:0000236,6.49e-39,14;CL:0000542,4.89e-28,53;CL:0000051,4.89e-28,53;CL:0000838,4.31e-23,52;CL:0000817,4.02e-21,3;CL:0002541,5.47e-21,3;CL:0000819,1.41e-16,1;CL:0002087,2.44e-12,115;CL:0000738,2.68e-10,136;CL:0002031,1.78e-09,120;CL:0000785,5.94e-09,2;CL:0000955,5.94e-09,2;CL:0000818,5.94e-09,2;CL:0000954,5.94e-09,2;CL:0000816,5.94e-09,2;CL:0002032,1.50e-08,161;CL:0000837,1.50e-08,161;CL:0000037,3.74e-08,168;CL:0000988,1.09e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.45e-19;53!CL:0000954;6.93e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.10e-07!10 | |ontology_enrichment_disease=DOID:0060058!1.10e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:12603;6.47e-17;1!DOID:0060073;1.93e-16;1!DOID:8675;1.93e-16;1!DOID:0060058;5.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,5.53e-17,1;DOID:0060073,1.41e-16,1;DOID:8675,1.41e-16,1;DOID:0060058,5.76e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.18e-15!3;UBERON:0004854!9.18e-15!3;UBERON:0009034!9.18e-15!3;UBERON:0002095!9.18e-15!3;UBERON:0004782!9.18e-15!3;UBERON:0003281!9.18e-15!3;UBERON:0009664!9.18e-15!3;UBERON:0002296!9.18e-15!3;UBERON:0005602!9.18e-15!3;UBERON:0001179!9.18e-15!3;UBERON:0006293!9.18e-15!3;UBERON:0000476!2.02e-07!3;UBERON:0000920!2.02e-07!3 | |ontology_enrichment_uberon=UBERON:0002106!9.18e-15!3;UBERON:0004854!9.18e-15!3;UBERON:0009034!9.18e-15!3;UBERON:0002095!9.18e-15!3;UBERON:0004782!9.18e-15!3;UBERON:0003281!9.18e-15!3;UBERON:0009664!9.18e-15!3;UBERON:0002296!9.18e-15!3;UBERON:0005602!9.18e-15!3;UBERON:0001179!9.18e-15!3;UBERON:0006293!9.18e-15!3;UBERON:0000476!2.02e-07!3;UBERON:0000920!2.02e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.45e-21;3!UBERON:0000920;4.45e-21;3!UBERON:0005631;5.59e-07;10!UBERON:0000158;5.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.47e-21,3;UBERON:0003124,1.47e-09,7 | |||
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|short_description=p@chr13:29004291..29004302,- | |short_description=p@chr13:29004291..29004302,- | ||
}} | }} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29004291..29004302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29004291..29004302, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.87e-51 | 24 |
pro-B cell | 9.87e-51 | 24 |
B cell | 6.49e-39 | 14 |
lymphocyte | 4.89e-28 | 53 |
common lymphoid progenitor | 4.89e-28 | 53 |
lymphoid lineage restricted progenitor cell | 4.31e-23 | 52 |
precursor B cell | 4.02e-21 | 3 |
chorionic membrane mesenchymal stem cell | 5.47e-21 | 3 |
B-1 B cell | 1.41e-16 | 1 |
nongranular leukocyte | 2.44e-12 | 115 |
leukocyte | 2.68e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.78e-09 | 120 |
mature B cell | 5.94e-09 | 2 |
pre-B-II cell | 5.94e-09 | 2 |
transitional stage B cell | 5.94e-09 | 2 |
small pre-B-II cell | 5.94e-09 | 2 |
immature B cell | 5.94e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.50e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-08 | 161 |
hematopoietic stem cell | 3.74e-08 | 168 |
hematopoietic cell | 1.09e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.47e-21 | 3 |
chorion | 1.47e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 5.53e-17 | 1 |
lymphatic system cancer | 1.41e-16 | 1 |
lymphosarcoma | 1.41e-16 | 1 |
lymphoma | 5.76e-07 | 10 |