FFCP PHASE1:Hg19::chr13:28712383..28712394,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255967 | |EntrezGene=255967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29991 | |HGNC=29991 | ||
|TSSclassifier=strong | |||
|UniProt=Q58A45 | |UniProt=Q58A45 | ||
|association_with_transcript=-248bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | |association_with_transcript=-248bp_to_ENST00000380958,ENST00000503791,NM_175854,uc010tdo.1_5end | ||
|cluster_id=chr13:28712383..28712394,+ | |||
|coexpression_cluster_id=C2203 | |coexpression_cluster_id=C2203 | ||
|description=CAGE_peak_9_at_PAN3_5end | |description=CAGE_peak_9_at_PAN3_5end | ||
|id=chr13:28712383..28712394,+ | |id=chr13:28712383..28712394,+ | ||
|ontology_enrichment_celltype=CL:0000037!5.94e-36!172;CL:0000566!5.94e-36!172;CL:0002032!3.52e-33!165;CL:0000837!3.52e-33!165;CL:0000988!4.00e-32!182;CL:0000738!1.82e-28!140;CL:0002031!3.01e-21!124;CL:0002087!3.31e-21!119;CL:0000763!4.57e-21!112;CL:0000049!4.57e-21!112;CL:0000766!2.07e-13!76;CL:0002057!3.55e-12!42;CL:0000542!3.79e-11!53;CL:0000051!3.79e-11!53;CL:0000860!4.35e-11!45;CL:0000839!6.52e-11!70;CL:0000557!7.68e-11!71;CL:0000838!1.34e-10!52;CL:0002009!1.65e-09!65;CL:0002194!2.50e-09!63;CL:0000576!2.50e-09!63;CL:0000040!2.50e-09!63;CL:0000559!2.50e-09!63;CL:0000134!1.85e-07!358;CL:0000945!8.33e-07!24;CL:0000826!8.33e-07!24;CL:0000219!8.77e-07!390 | |ontology_enrichment_celltype=CL:0000037!5.94e-36!172;CL:0000566!5.94e-36!172;CL:0002032!3.52e-33!165;CL:0000837!3.52e-33!165;CL:0000988!4.00e-32!182;CL:0000738!1.82e-28!140;CL:0002031!3.01e-21!124;CL:0002087!3.31e-21!119;CL:0000763!4.57e-21!112;CL:0000049!4.57e-21!112;CL:0000766!2.07e-13!76;CL:0002057!3.55e-12!42;CL:0000542!3.79e-11!53;CL:0000051!3.79e-11!53;CL:0000860!4.35e-11!45;CL:0000839!6.52e-11!70;CL:0000557!7.68e-11!71;CL:0000838!1.34e-10!52;CL:0002009!1.65e-09!65;CL:0002194!2.50e-09!63;CL:0000576!2.50e-09!63;CL:0000040!2.50e-09!63;CL:0000559!2.50e-09!63;CL:0000134!1.85e-07!358;CL:0000945!8.33e-07!24;CL:0000826!8.33e-07!24;CL:0000219!8.77e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000775;5.02e-16;3!CL:0000236;2.15e-12;13!CL:0000094;1.98e-10;8!CL:0000945;1.25e-08;24!CL:0000081;1.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,5.10e-16,3;CL:0000037,1.50e-15,168;CL:0000988,1.91e-14,177;CL:0002032,8.95e-14,161;CL:0000837,8.95e-14,161;CL:0000738,5.80e-13,136;CL:0000236,1.91e-11,14;CL:0000094,2.02e-10,8;CL:0000763,4.87e-10,108;CL:0000049,4.87e-10,108;CL:0000945,1.09e-08,24;CL:0000826,1.09e-08,24;CL:0002087,9.02e-08,115;CL:0000081,1.40e-07,11;CL:0002031,2.47e-07,120;CL:0000766,5.21e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!7.56e-08!51;DOID:0060083!7.56e-08!51;DOID:1240!1.48e-07!39 | |ontology_enrichment_disease=DOID:2531!7.56e-08!51;DOID:0060083!7.56e-08!51;DOID:1240!1.48e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.62e-14!112;UBERON:0002390!1.80e-14!102;UBERON:0003061!1.80e-14!102;UBERON:0002371!1.19e-08!80;UBERON:0001474!1.44e-08!86 | |ontology_enrichment_uberon=UBERON:0002193!1.62e-14!112;UBERON:0002390!1.80e-14!102;UBERON:0003061!1.80e-14!102;UBERON:0002371!1.19e-08!80;UBERON:0001474!1.44e-08!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.32e-14;15!UBERON:0000179;2.32e-14;15!UBERON:0000463;2.32e-14;15!UBERON:0002390;7.09e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.38e-14,15;UBERON:0000179,3.38e-14,15;UBERON:0000463,3.38e-14,15;UBERON:0002390,4.79e-11,98;UBERON:0003061,4.79e-11,98;UBERON:0002193,1.13e-09,108 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0.164201178899891,0.629686250509434,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,1.85921281392724,0.142169232487422,1.17440175733939,0.553995408531877,1.20326668482085,0.434021741431704,0.223915474239924,0.32389366601898,0,1.45398238779565,0.755751887377619,1.21292030593908,0.464858073811369,1.6446715520873,1.23882548358041,0,0.256160706529101,0,1.37898272294647,0,1.35426486594342,0.188242339542605,0.545812300115692,0.674170453335254,0.612167784741805,0,1.27867425159808,0.989553900560148,0.598390972864896,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,0.316462387440884,0,0.637812899895131,0.209658645508376,0.336985893439485,0.600707571366025,0.16072558669708,0,0.59675003159727,0.182664153764634,0,1.63841583378639,0,0.853460445133014,1.20118796110804,1.72425731986345,0.661044872784862,0,1.1384259382189,1.17447437874188,1.52909291250092,1.32171328579026,2.80254281490768,0.526768169550154,0.196709770113833,0.393010762749165,0.616804496998528,0.668745981562712,0.32592226663359,0.473447805734733,1.94826728407911,0.334231370655521,0,0.443067789167242,1.08321545506006,0.128091319725675,0.520237390239513,0.164437904603676,0.276350017785848,0.579606171470105,0.444859689486181,0,0,0.226618685395132,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.947109008176067,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0.696518949197069,0.398873881556595,0.953962497221368,0,0.371457501329565,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0,6.58902087180316,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.0974370051611986,0.252433774244115,0,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.985326475791887,0.176096868026452,0.414656231081544,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0.591092280605782,0.862510299438069,0.641715181398742,0,0,0,0,0,5.99205619157746,11.966458368161,3.72973962092432,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.74709290462411,0,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,1.19115887728894,1.23408681925858,1.94541993357815,1.62009431171434,0.79312517629427,0.106824071127473,0,0,0.929015875628594,0.28853842595289,0.426851060090485,0.318852545457645,0.199579371432817,0.957526850661834,0,0,0.561594356226918,0.228234679033192,0,2.50634477090067,0.169291777801603,0.802940375518498,0.403599414382095,1.27753871307098,1.03051603426729,0.307240764308458,0,0.500547425135725,0.19538809540204,0.835218521685727,0,0.270455678475983,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0,0,0.494411622680279,0,0,0.552567831062295,0,0.102268682502155,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0.262379999988587,0,0,0,0,0,0,0,0,0.120596438625408,0,1.10579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.498635045700469,0,0,0,0.189753732724185,0.476809736941136,0,0,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0,0,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0,0,0.0821154570532092,0.290967049465258,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0.343189995723929,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,1.277465880669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| ||
|short_description=p9@PAN3 | |short_description=p9@PAN3 | ||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p9@PAN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PAN3_5end |
Coexpression cluster: | C2203_non_Neutrophils_Eosinophils_lymphoma_CD19_Whole_Burkitt |
Association with transcript: | -248bp_to_ENST00000380958, ENST00000503791, NM_175854, uc010tdo.1_5end |
EntrezGene: | PAN3 |
HGNC: | 29991 |
UniProt: | Q58A45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 5.10e-16 | 3 |
hematopoietic stem cell | 1.50e-15 | 168 |
hematopoietic cell | 1.91e-14 | 177 |
hematopoietic oligopotent progenitor cell | 8.95e-14 | 161 |
hematopoietic multipotent progenitor cell | 8.95e-14 | 161 |
leukocyte | 5.80e-13 | 136 |
B cell | 1.91e-11 | 14 |
granulocyte | 2.02e-10 | 8 |
myeloid cell | 4.87e-10 | 108 |
common myeloid progenitor | 4.87e-10 | 108 |
lymphocyte of B lineage | 1.09e-08 | 24 |
pro-B cell | 1.09e-08 | 24 |
nongranular leukocyte | 9.02e-08 | 115 |
blood cell | 1.40e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 2.47e-07 | 120 |
myeloid leukocyte | 5.21e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 3.38e-14 | 15 |
haemolymphatic fluid | 3.38e-14 | 15 |
organism substance | 3.38e-14 | 15 |
hematopoietic system | 4.79e-11 | 98 |
blood island | 4.79e-11 | 98 |
hemolymphoid system | 1.13e-09 | 108 |