FFCP PHASE1:Hg19::chr13:102746160..102746164,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:102746160..102746164,- | |||
|coexpression_cluster_id=C586 | |coexpression_cluster_id=C586 | ||
|description=CAGE_peak_at_chr13:102746160..102746164,- | |description=CAGE_peak_at_chr13:102746160..102746164,- | ||
|id=chr13:102746160..102746164,- | |id=chr13:102746160..102746164,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.62e-23;3!UBERON:0006238;2.55e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.18e-50!57;UBERON:0005068!1.18e-50!57;UBERON:0006241!1.18e-50!57;UBERON:0007135!1.18e-50!57;UBERON:0002616!1.28e-41!59;UBERON:0001017!6.08e-41!82;UBERON:0001893!2.26e-40!34;UBERON:0000955!5.79e-40!69;UBERON:0006238!5.79e-40!69;UBERON:0000073!2.20e-39!94;UBERON:0001016!2.20e-39!94;UBERON:0001869!5.91e-39!32;UBERON:0005743!1.01e-38!86;UBERON:0002791!1.76e-37!33;UBERON:0002346!5.94e-37!90;UBERON:0002020!1.65e-36!34;UBERON:0003528!1.65e-36!34;UBERON:0002780!2.16e-36!41;UBERON:0001890!2.16e-36!41;UBERON:0006240!2.16e-36!41;UBERON:0007023!2.41e-36!115;UBERON:0003080!2.02e-35!42;UBERON:0003075!9.60e-34!86;UBERON:0007284!9.60e-34!86;UBERON:0002619!1.37e-30!22;UBERON:0001950!3.60e-29!20;UBERON:0000956!1.12e-26!25;UBERON:0000203!1.12e-26!25;UBERON:0003056!6.07e-23!61;UBERON:0000924!2.70e-22!173;UBERON:0006601!2.70e-22!173;UBERON:0000033!2.76e-21!123;UBERON:0004121!5.16e-20!169;UBERON:0000153!5.63e-20!129;UBERON:0007811!5.63e-20!129;UBERON:0000200!6.05e-17!6;UBERON:0003076!5.60e-16!15;UBERON:0003057!5.60e-16!15;UBERON:0004733!1.55e-11!12;UBERON:0002028!1.55e-11!12;UBERON:0007277!1.55e-11!12;UBERON:0002420!2.71e-11!9;UBERON:0007245!2.71e-11!9;UBERON:0010009!2.71e-11!9;UBERON:0010011!2.71e-11!9;UBERON:0000454!2.71e-11!9;UBERON:0002308!3.50e-11!9;UBERON:0000125!3.50e-11!9;UBERON:0000025!4.52e-11!194;UBERON:0004732!1.35e-10!13;UBERON:0000369!7.76e-10!4;UBERON:0002435!7.76e-10!4;UBERON:0000204!7.76e-10!4;UBERON:0010082!7.76e-10!4;UBERON:0009663!1.34e-09!7;UBERON:0001870!3.76e-09!2;UBERON:0000064!5.68e-09!219;UBERON:0001871!1.82e-08!7;UBERON:0000475!3.22e-08!365;UBERON:0002298!6.12e-08!8;UBERON:0000349!9.38e-08!5;UBERON:0001872!1.18e-07!5;UBERON:0002021!1.21e-07!5;UBERON:0004111!1.34e-07!241;UBERON:0002680!1.70e-07!9;UBERON:0001895!1.70e-07!9;UBERON:0010092!1.70e-07!9;UBERON:0000483!8.67e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!1.18e-50!57;UBERON:0005068!1.18e-50!57;UBERON:0006241!1.18e-50!57;UBERON:0007135!1.18e-50!57;UBERON:0002616!1.28e-41!59;UBERON:0001017!6.08e-41!82;UBERON:0001893!2.26e-40!34;UBERON:0000955!5.79e-40!69;UBERON:0006238!5.79e-40!69;UBERON:0000073!2.20e-39!94;UBERON:0001016!2.20e-39!94;UBERON:0001869!5.91e-39!32;UBERON:0005743!1.01e-38!86;UBERON:0002791!1.76e-37!33;UBERON:0002346!5.94e-37!90;UBERON:0002020!1.65e-36!34;UBERON:0003528!1.65e-36!34;UBERON:0002780!2.16e-36!41;UBERON:0001890!2.16e-36!41;UBERON:0006240!2.16e-36!41;UBERON:0007023!2.41e-36!115;UBERON:0003080!2.02e-35!42;UBERON:0003075!9.60e-34!86;UBERON:0007284!9.60e-34!86;UBERON:0002619!1.37e-30!22;UBERON:0001950!3.60e-29!20;UBERON:0000956!1.12e-26!25;UBERON:0000203!1.12e-26!25;UBERON:0003056!6.07e-23!61;UBERON:0000924!2.70e-22!173;UBERON:0006601!2.70e-22!173;UBERON:0000033!2.76e-21!123;UBERON:0004121!5.16e-20!169;UBERON:0000153!5.63e-20!129;UBERON:0007811!5.63e-20!129;UBERON:0000200!6.05e-17!6;UBERON:0003076!5.60e-16!15;UBERON:0003057!5.60e-16!15;UBERON:0004733!1.55e-11!12;UBERON:0002028!1.55e-11!12;UBERON:0007277!1.55e-11!12;UBERON:0002420!2.71e-11!9;UBERON:0007245!2.71e-11!9;UBERON:0010009!2.71e-11!9;UBERON:0010011!2.71e-11!9;UBERON:0000454!2.71e-11!9;UBERON:0002308!3.50e-11!9;UBERON:0000125!3.50e-11!9;UBERON:0000025!4.52e-11!194;UBERON:0004732!1.35e-10!13;UBERON:0000369!7.76e-10!4;UBERON:0002435!7.76e-10!4;UBERON:0000204!7.76e-10!4;UBERON:0010082!7.76e-10!4;UBERON:0009663!1.34e-09!7;UBERON:0001870!3.76e-09!2;UBERON:0000064!5.68e-09!219;UBERON:0001871!1.82e-08!7;UBERON:0000475!3.22e-08!365;UBERON:0002298!6.12e-08!8;UBERON:0000349!9.38e-08!5;UBERON:0001872!1.18e-07!5;UBERON:0002021!1.21e-07!5;UBERON:0004111!1.34e-07!241;UBERON:0002680!1.70e-07!9;UBERON:0001895!1.70e-07!9;UBERON:0010092!1.70e-07!9;UBERON:0000483!8.67e-07!309 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.71e-14;5!UBERON:0002037;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0001017;6.51e-08;75!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.83e-14,5;UBERON:0002037,2.19e-12,6;UBERON:0006215,2.19e-12,6;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002680,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,2.32216445855572,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.11743701340006,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,2.32216445855572,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.500763722825999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.321146125482298,0,1.11743701340006,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.317079050969534,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.203909198930495,0.197318320688547,0,0,0,0.314231179832004,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:102746160..102746164,- | |short_description=p@chr13:102746160..102746164,- | ||
}} | }} |
Latest revision as of 14:16, 24 July 2015
Short description: | p@chr13:102746160..102746164, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:102746160..102746164, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.83e-14 | 5 |
cerebellum | 2.19e-12 | 6 |
rhombic lip | 2.19e-12 | 6 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of metencephalon | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
nervous system | 1.68e-07 | 89 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |