FFCP PHASE1:Hg19::chr12:96649259..96649290,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2004 | |EntrezGene=2004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |HGNC=3325 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000549529_5end | |association_with_transcript=21bp_to_ENST00000549529_5end | ||
|cluster_id=chr12:96649259..96649290,+ | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_9_at_ELK3_5end | |description=CAGE_peak_9_at_ELK3_5end | ||
|id=chr12:96649259..96649290,+ | |id=chr12:96649259..96649290,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.99e-35!42;CL:0000860!2.59e-32!45;CL:0002009!9.75e-25!65;CL:0000557!1.94e-23!71;CL:0002194!8.58e-22!63;CL:0000576!8.58e-22!63;CL:0000040!8.58e-22!63;CL:0000559!8.58e-22!63;CL:0000839!3.14e-20!70;CL:0000766!2.36e-19!76;CL:0000763!1.20e-15!112;CL:0000049!1.20e-15!112;CL:0000453!2.38e-11!5;CL:0000738!1.28e-10!140;CL:0002031!1.04e-09!124;CL:0002087!6.33e-08!119;CL:0002032!1.13e-07!165;CL:0000837!1.13e-07!165;CL:0000037!5.07e-07!172;CL:0000566!5.07e-07!172 | |ontology_enrichment_celltype=CL:0002057!2.99e-35!42;CL:0000860!2.59e-32!45;CL:0002009!9.75e-25!65;CL:0000557!1.94e-23!71;CL:0002194!8.58e-22!63;CL:0000576!8.58e-22!63;CL:0000040!8.58e-22!63;CL:0000559!8.58e-22!63;CL:0000839!3.14e-20!70;CL:0000766!2.36e-19!76;CL:0000763!1.20e-15!112;CL:0000049!1.20e-15!112;CL:0000453!2.38e-11!5;CL:0000738!1.28e-10!140;CL:0002031!1.04e-09!124;CL:0002087!6.33e-08!119;CL:0002032!1.13e-07!165;CL:0000837!1.13e-07!165;CL:0000037!5.07e-07!172;CL:0000566!5.07e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.52e-24;33!CL:0002057;4.52e-24;33!CL:0001014;6.43e-20;2!CL:0001016;6.43e-20;2!CL:0000473;3.75e-16;39!CL:0000234;3.75e-16;39!CL:0000576;2.97e-11;48!CL:0000453;1.63e-08;5!CL:0000840;3.14e-07;5!CL:0000766;4.05e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.44e-20,2;CL:0001016,6.44e-20,2;CL:0000860,1.01e-19,42;CL:0002057,1.01e-19,42;CL:0002009,5.93e-19,61;CL:0000557,4.10e-17,67;CL:0000473,4.45e-17,48;CL:0000234,4.45e-17,48;CL:0002194,2.26e-13,59;CL:0000576,2.26e-13,59;CL:0000040,2.26e-13,59;CL:0000559,2.26e-13,59;CL:0000839,8.05e-12,66;CL:0000766,9.97e-11,72;CL:0000763,5.96e-10,108;CL:0000049,5.96e-10,108;CL:0002031,9.01e-09,120;CL:0000453,1.63e-08,5;CL:0000738,1.61e-07,136;CL:0000840,3.14e-07,5;CL:0001029,3.14e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-16;42!UBERON:0008947;7.00e-08;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.88e-20!80;UBERON:0001474!9.03e-18!86;UBERON:0002390!6.45e-17!102;UBERON:0003061!6.45e-17!102;UBERON:0004765!6.54e-15!101;UBERON:0001434!6.54e-15!101;UBERON:0002193!1.49e-14!112;UBERON:0002405!6.96e-13!115;UBERON:0003081!8.95e-10!216;UBERON:0007023!5.33e-08!115;UBERON:0003978!3.33e-07!3;UBERON:0009751!3.33e-07!3;UBERON:0000946!3.33e-07!3;UBERON:0002523!3.33e-07!3;UBERON:0005983!3.33e-07!3;UBERON:0002165!3.33e-07!3;UBERON:0002062!3.33e-07!3;UBERON:0007280!3.33e-07!3 | |ontology_enrichment_uberon=UBERON:0002371!8.88e-20!80;UBERON:0001474!9.03e-18!86;UBERON:0002390!6.45e-17!102;UBERON:0003061!6.45e-17!102;UBERON:0004765!6.54e-15!101;UBERON:0001434!6.54e-15!101;UBERON:0002193!1.49e-14!112;UBERON:0002405!6.96e-13!115;UBERON:0003081!8.95e-10!216;UBERON:0007023!5.33e-08!115;UBERON:0003978!3.33e-07!3;UBERON:0009751!3.33e-07!3;UBERON:0000946!3.33e-07!3;UBERON:0002523!3.33e-07!3;UBERON:0005983!3.33e-07!3;UBERON:0002165!3.33e-07!3;UBERON:0002062!3.33e-07!3;UBERON:0007280!3.33e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.13e-10;1!UBERON:0006518;1.13e-10;1!UBERON:0008949;1.13e-10;1!UBERON:0000101;1.13e-10;1!UBERON:0002167;1.13e-10;1!UBERON:0002048;6.30e-07;22!UBERON:0000117;6.30e-07;22!UBERON:0000171;6.30e-07;22!UBERON:0000170;6.30e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.86e-15,76;UBERON:0001474,1.13e-13,82;UBERON:0004765,2.65e-12,90;UBERON:0002405,7.55e-12,93;UBERON:0002390,3.75e-11,98;UBERON:0003061,3.75e-11,98;UBERON:0001434,6.81e-11,100;UBERON:0002171,9.84e-11,1;UBERON:0006518,9.84e-11,1;UBERON:0008949,9.84e-11,1;UBERON:0000101,9.84e-11,1;UBERON:0002167,9.84e-11,1;UBERON:0002193,5.96e-10,108;UBERON:0002048,5.97e-07,22;UBERON:0000117,5.97e-07,22;UBERON:0000171,5.97e-07,22;UBERON:0000170,5.97e-07,22;UBERON:0005597,5.97e-07,22;UBERON:0000118,5.97e-07,22 | |||
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| ||
|short_description=p9@ELK3 | |short_description=p9@ELK3 | ||
}} | }} |
Latest revision as of 03:59, 16 September 2015
Short description: | p9@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ELK3_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 21bp_to_ENST00000549529_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.44e-20 | 2 |
immature CD1a-positive Langerhans cell | 6.44e-20 | 2 |
classical monocyte | 1.01e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-19 | 42 |
macrophage dendritic cell progenitor | 5.93e-19 | 61 |
granulocyte monocyte progenitor cell | 4.10e-17 | 67 |
defensive cell | 4.45e-17 | 48 |
phagocyte | 4.45e-17 | 48 |
monopoietic cell | 2.26e-13 | 59 |
monocyte | 2.26e-13 | 59 |
monoblast | 2.26e-13 | 59 |
promonocyte | 2.26e-13 | 59 |
myeloid lineage restricted progenitor cell | 8.05e-12 | 66 |
myeloid leukocyte | 9.97e-11 | 72 |
myeloid cell | 5.96e-10 | 108 |
common myeloid progenitor | 5.96e-10 | 108 |
hematopoietic lineage restricted progenitor cell | 9.01e-09 | 120 |
Langerhans cell | 1.63e-08 | 5 |
leukocyte | 1.61e-07 | 136 |
immature conventional dendritic cell | 3.14e-07 | 5 |
common dendritic progenitor | 3.14e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.86e-15 | 76 |
bone element | 1.13e-13 | 82 |
skeletal element | 2.65e-12 | 90 |
immune system | 7.55e-12 | 93 |
hematopoietic system | 3.75e-11 | 98 |
blood island | 3.75e-11 | 98 |
skeletal system | 6.81e-11 | 100 |
lower lobe of right lung | 9.84e-11 | 1 |
right lung lobe | 9.84e-11 | 1 |
lower lobe of lung | 9.84e-11 | 1 |
lobe of lung | 9.84e-11 | 1 |
right lung | 9.84e-11 | 1 |
hemolymphoid system | 5.96e-10 | 108 |
lung | 5.97e-07 | 22 |
respiratory tube | 5.97e-07 | 22 |
respiration organ | 5.97e-07 | 22 |
pair of lungs | 5.97e-07 | 22 |
lung primordium | 5.97e-07 | 22 |
lung bud | 5.97e-07 | 22 |