FFCP PHASE1:Hg19::chr12:94542459..94542513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10154 | |EntrezGene=10154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |HGNC=9106 | ||
|TSSclassifier=strong | |||
|UniProt=O60486 | |UniProt=O60486 | ||
|association_with_transcript=0bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end | |association_with_transcript=0bp_to_ENST00000258526,NM_005761,uc001tdc.2_5end | ||
|cluster_id=chr12:94542459..94542513,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_PLXNC1_5end | |description=CAGE_peak_1_at_PLXNC1_5end | ||
|id=chr12:94542459..94542513,+ | |id=chr12:94542459..94542513,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.19e-45!140;CL:0000037!1.97e-42!172;CL:0000566!1.97e-42!172;CL:0002032!1.56e-39!165;CL:0000837!1.56e-39!165;CL:0000988!1.35e-38!182;CL:0002087!1.41e-36!119;CL:0002031!6.52e-35!124;CL:0000766!1.73e-30!76;CL:0000763!2.70e-28!112;CL:0000049!2.70e-28!112;CL:0000557!5.44e-27!71;CL:0002009!1.24e-26!65;CL:0002057!5.61e-26!42;CL:0002194!1.19e-25!63;CL:0000576!1.19e-25!63;CL:0000040!1.19e-25!63;CL:0000559!1.19e-25!63;CL:0000839!3.41e-24!70;CL:0000860!2.49e-22!45;CL:0000542!4.23e-10!53;CL:0000051!4.23e-10!53;CL:0000838!4.36e-10!52;CL:0000219!6.09e-10!390;CL:0000134!1.06e-09!358;CL:0002320!1.73e-08!365;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9 | |ontology_enrichment_celltype=CL:0000738!5.19e-45!140;CL:0000037!1.97e-42!172;CL:0000566!1.97e-42!172;CL:0002032!1.56e-39!165;CL:0000837!1.56e-39!165;CL:0000988!1.35e-38!182;CL:0002087!1.41e-36!119;CL:0002031!6.52e-35!124;CL:0000766!1.73e-30!76;CL:0000763!2.70e-28!112;CL:0000049!2.70e-28!112;CL:0000557!5.44e-27!71;CL:0002009!1.24e-26!65;CL:0002057!5.61e-26!42;CL:0002194!1.19e-25!63;CL:0000576!1.19e-25!63;CL:0000040!1.19e-25!63;CL:0000559!1.19e-25!63;CL:0000839!3.41e-24!70;CL:0000860!2.49e-22!45;CL:0000542!4.23e-10!53;CL:0000051!4.23e-10!53;CL:0000838!4.36e-10!52;CL:0000219!6.09e-10!390;CL:0000134!1.06e-09!358;CL:0002320!1.73e-08!365;CL:0002393!1.92e-07!9;CL:0002397!1.92e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.34e-21;39!CL:0000234;2.34e-21;39!CL:0000860;1.16e-20;33!CL:0002057;1.16e-20;33!CL:0000576;1.05e-19;48!CL:0000766;8.32e-17;69!CL:0002087;2.51e-12;104!CL:0000738;1.12e-11;136!CL:0000763;1.37e-10;100!CL:0000988;1.28e-07;177!CL:0000094;1.96e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.14e-51,136;CL:0000037,2.47e-47,168;CL:0002032,1.37e-44,161;CL:0000837,1.37e-44,161;CL:0000988,4.90e-44,177;CL:0002087,1.02e-42,115;CL:0002031,2.87e-40,120;CL:0000766,3.96e-39,72;CL:0000557,5.85e-35,67;CL:0002009,6.71e-35,61;CL:0000473,2.72e-34,48;CL:0000234,2.72e-34,48;CL:0000763,3.23e-34,108;CL:0000049,3.23e-34,108;CL:0002194,9.28e-34,59;CL:0000576,9.28e-34,59;CL:0000040,9.28e-34,59;CL:0000559,9.28e-34,59;CL:0000839,4.53e-31,66;CL:0000860,1.58e-29,42;CL:0002057,1.58e-29,42;CL:0000542,1.41e-09,53;CL:0000051,1.41e-09,53;CL:0000838,1.50e-09,52;CL:0002393,2.68e-08,9;CL:0002397,2.68e-08,9;CL:0000134,8.28e-08,354;CL:0000094,2.01e-07,8;CL:0002320,7.01e-07,361;CL:0000219,9.40e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-21;42!CL:0000049;1.74e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.70e-33!102;UBERON:0003061!2.70e-33!102;UBERON:0002193!1.21e-28!112;UBERON:0002371!1.68e-23!80;UBERON:0001474!7.41e-22!86;UBERON:0007023!2.04e-21!115;UBERON:0002405!8.37e-21!115;UBERON:0004765!5.46e-18!101;UBERON:0001434!5.46e-18!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15;UBERON:0001049!2.87e-08!57;UBERON:0005068!2.87e-08!57;UBERON:0006241!2.87e-08!57;UBERON:0007135!2.87e-08!57;UBERON:0002384!5.58e-08!375;UBERON:0002204!1.32e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!2.70e-33!102;UBERON:0003061!2.70e-33!102;UBERON:0002193!1.21e-28!112;UBERON:0002371!1.68e-23!80;UBERON:0001474!7.41e-22!86;UBERON:0007023!2.04e-21!115;UBERON:0002405!8.37e-21!115;UBERON:0004765!5.46e-18!101;UBERON:0001434!5.46e-18!101;UBERON:0000178!1.20e-08!15;UBERON:0000179!1.20e-08!15;UBERON:0000463!1.20e-08!15;UBERON:0001049!2.87e-08!57;UBERON:0005068!2.87e-08!57;UBERON:0006241!2.87e-08!57;UBERON:0007135!2.87e-08!57;UBERON:0002384!5.58e-08!375;UBERON:0002204!1.32e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.93e-09;15!UBERON:0000179;3.93e-09;15!UBERON:0000463;3.93e-09;15!UBERON:0002390;7.79e-07;32 | |||
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|short_description=p1@PLXNC1 | |short_description=p1@PLXNC1 | ||
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Latest revision as of 00:57, 16 September 2015
Short description: | p1@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLXNC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000258526, NM_005761, uc001tdc.2_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | O60486 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-41 | 98 |
blood island | 1.18e-41 | 98 |
hemolymphoid system | 1.93e-36 | 108 |
bone marrow | 1.07e-30 | 76 |
immune system | 2.37e-28 | 93 |
bone element | 3.97e-26 | 82 |
adult organism | 2.83e-21 | 114 |
skeletal element | 4.08e-21 | 90 |
skeletal system | 1.20e-19 | 100 |
blood | 4.51e-09 | 15 |
haemolymphatic fluid | 4.51e-09 | 15 |
organism substance | 4.51e-09 | 15 |
lateral plate mesoderm | 3.16e-08 | 203 |
neural tube | 1.94e-07 | 56 |
neural rod | 1.94e-07 | 56 |
future spinal cord | 1.94e-07 | 56 |
neural keel | 1.94e-07 | 56 |
musculoskeletal system | 3.06e-07 | 167 |