FFCP PHASE1:Hg19::chr12:92506284..92506289,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:92506284..92506289,- | |||
|coexpression_cluster_id=C306 | |coexpression_cluster_id=C306 | ||
|description=CAGE_peak_at_chr12:92506284..92506289,- | |description=CAGE_peak_at_chr12:92506284..92506289,- | ||
|id=chr12:92506284..92506289,- | |id=chr12:92506284..92506289,- | ||
|ontology_enrichment_celltype=CL:0000838!2.61e-16!52;CL:0000542!7.77e-16!53;CL:0000051!7.77e-16!53;CL:0000738!1.40e-15!140;CL:0002087!8.20e-15!119;CL:0000791!2.18e-13!18;CL:0000789!2.18e-13!18;CL:0002420!2.18e-13!18;CL:0002419!2.18e-13!18;CL:0000790!2.18e-13!18;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0000988!2.29e-12!182;CL:0002032!2.08e-11!165;CL:0000837!2.08e-11!165;CL:0002031!4.53e-11!124;CL:0000084!8.89e-10!25;CL:0000827!8.89e-10!25;CL:0000625!8.89e-09!11;CL:0002393!7.12e-08!9;CL:0002397!7.12e-08!9;CL:0000624!2.41e-07!6 | |ontology_enrichment_celltype=CL:0000838!2.61e-16!52;CL:0000542!7.77e-16!53;CL:0000051!7.77e-16!53;CL:0000738!1.40e-15!140;CL:0002087!8.20e-15!119;CL:0000791!2.18e-13!18;CL:0000789!2.18e-13!18;CL:0002420!2.18e-13!18;CL:0002419!2.18e-13!18;CL:0000790!2.18e-13!18;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0000988!2.29e-12!182;CL:0002032!2.08e-11!165;CL:0000837!2.08e-11!165;CL:0002031!4.53e-11!124;CL:0000084!8.89e-10!25;CL:0000827!8.89e-10!25;CL:0000625!8.89e-09!11;CL:0002393!7.12e-08!9;CL:0002397!7.12e-08!9;CL:0000624!2.41e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.97e-20;18!CL:0000789;7.97e-20;18!CL:0002419;7.97e-20;18!CL:0000624;5.96e-16;6!CL:0000623;1.62e-14;3!CL:0000775;2.26e-14;3!CL:0000084;3.58e-14;25!CL:0000094;8.77e-12;8!CL:0000625;9.01e-09;11!CL:0000081;1.03e-08;11!CL:0000542;2.38e-08;53!CL:0002393;1.98e-07;6!CL:0002397;1.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.22e-20,18;CL:0000789,7.22e-20,18;CL:0002420,7.22e-20,18;CL:0002419,7.22e-20,18;CL:0000790,7.22e-20,18;CL:0000624,5.53e-16,6;CL:0000838,1.30e-14,52;CL:0000623,1.73e-14,3;CL:0000825,1.73e-14,3;CL:0000775,2.26e-14,3;CL:0000542,2.57e-14,53;CL:0000051,2.57e-14,53;CL:0000084,3.34e-14,25;CL:0000827,3.34e-14,25;CL:0000738,3.48e-14,136;CL:0000094,8.30e-12,8;CL:0000037,4.70e-11,168;CL:0002087,1.19e-10,115;CL:0000988,2.25e-10,177;CL:0002032,5.88e-10,161;CL:0000837,5.88e-10,161;CL:0000625,8.65e-09,11;CL:0000081,9.89e-09,11;CL:0002031,2.09e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.97e-20;18!CL:0000051;2.38e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:92506284..92506289,- | |short_description=p@chr12:92506284..92506289,- | ||
}} | }} |
Latest revision as of 13:32, 24 July 2015
Short description: | p@chr12:92506284..92506289, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:92506284..92506289, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.22e-20 | 18 |
alpha-beta T cell | 7.22e-20 | 18 |
immature T cell | 7.22e-20 | 18 |
mature T cell | 7.22e-20 | 18 |
immature alpha-beta T cell | 7.22e-20 | 18 |
CD4-positive, alpha-beta T cell | 5.53e-16 | 6 |
lymphoid lineage restricted progenitor cell | 1.30e-14 | 52 |
natural killer cell | 1.73e-14 | 3 |
pro-NK cell | 1.73e-14 | 3 |
neutrophil | 2.26e-14 | 3 |
lymphocyte | 2.57e-14 | 53 |
common lymphoid progenitor | 2.57e-14 | 53 |
T cell | 3.34e-14 | 25 |
pro-T cell | 3.34e-14 | 25 |
leukocyte | 3.48e-14 | 136 |
granulocyte | 8.30e-12 | 8 |
hematopoietic stem cell | 4.70e-11 | 168 |
nongranular leukocyte | 1.19e-10 | 115 |
hematopoietic cell | 2.25e-10 | 177 |
hematopoietic oligopotent progenitor cell | 5.88e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.88e-10 | 161 |
CD8-positive, alpha-beta T cell | 8.65e-09 | 11 |
blood cell | 9.89e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 2.09e-08 | 120 |