FFCP PHASE1:Hg19::chr18:10462163..10462165,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:10462163..10462165,+
|short_description=p@chr18:10462163..10462165,+
|description=CAGE_peak_at_chr18:10462163..10462165,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:10462163..10462165,+ | |||
|description=CAGE_peak_at_chr18:10462163..10462165,+ | |||
|id=chr18:10462163..10462165,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.84e-14;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!3.89e-11!10;DOID:5409!7.15e-09!4;DOID:3095!1.53e-08!22;DOID:2994!1.53e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;6.82e-59;10!DOID:3095;8.45e-27;22!DOID:2994;8.45e-27;22!DOID:169;6.00e-12;6!DOID:3193;1.44e-09;2!DOID:962;1.44e-09;2!DOID:1192;8.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.14e-59,10;DOID:3095,6.75e-27,22;DOID:2994,6.75e-27,22;DOID:169,5.68e-12,6;DOID:3193,1.22e-09,2;DOID:962,1.22e-09,2;DOID:0050687,7.27e-07,143;DOID:1192,7.70e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001893!1.01e-23!34;UBERON:0002791!2.53e-22!33;UBERON:0002020!3.06e-21!34;UBERON:0003528!3.06e-21!34;UBERON:0001049!4.14e-21!57;UBERON:0005068!4.14e-21!57;UBERON:0006241!4.14e-21!57;UBERON:0007135!4.14e-21!57;UBERON:0002780!8.37e-21!41;UBERON:0001890!8.37e-21!41;UBERON:0006240!8.37e-21!41;UBERON:0001869!1.22e-20!32;UBERON:0003080!3.64e-20!42;UBERON:0002616!3.89e-20!59;UBERON:0002346!1.44e-19!90;UBERON:0000955!1.61e-18!69;UBERON:0006238!1.61e-18!69;UBERON:0000073!2.29e-17!94;UBERON:0001016!2.29e-17!94;UBERON:0001017!4.01e-17!82;UBERON:0005743!6.11e-16!86;UBERON:0000956!2.86e-15!25;UBERON:0000203!2.86e-15!25;UBERON:0003075!5.31e-15!86;UBERON:0007284!5.31e-15!86;UBERON:0007023!7.60e-15!115;UBERON:0000924!1.37e-13!173;UBERON:0006601!1.37e-13!173;UBERON:0003056!2.72e-13!61;UBERON:0002619!3.19e-13!22;UBERON:0000064!1.13e-12!219;UBERON:0001950!1.75e-12!20;UBERON:0004121!1.48e-10!169;UBERON:0000033!2.81e-10!123;UBERON:0000153!2.03e-09!129;UBERON:0007811!2.03e-09!129;UBERON:0002420!9.50e-08!9;UBERON:0007245!9.50e-08!9;UBERON:0010009!9.50e-08!9;UBERON:0010011!9.50e-08!9;UBERON:0000454!9.50e-08!9;UBERON:0002308!1.78e-07!9;UBERON:0000125!1.78e-07!9;UBERON:0002771!3.36e-07!3;UBERON:0009663!4.94e-07!7;UBERON:0001871!8.48e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.34e-66;4!UBERON:0000923;4.34e-66;4!UBERON:0010316;4.34e-66;4!UBERON:0005291;4.34e-66;4!UBERON:0002050;5.28e-53;5!UBERON:0005423;5.28e-53;5!UBERON:0007029;8.72e-18;1!UBERON:0001389;8.72e-18;1!UBERON:0000026;8.72e-18;1!UBERON:0008784;8.72e-18;1!UBERON:0006058;8.72e-18;1!UBERON:0003663;8.72e-18;1!UBERON:0004256;8.72e-18;1!UBERON:0004708;8.72e-18;1!UBERON:0002101;8.72e-18;1!UBERON:0004709;8.72e-18;1!UBERON:0002529;8.72e-18;1!UBERON:0010538;8.72e-18;1!UBERON:0003661;8.72e-18;1!UBERON:0010890;8.72e-18;1!UBERON:0002471;8.72e-18;1!UBERON:0001383;8.72e-18;1!UBERON:0010758;8.72e-18;1!UBERON:0010707;8.72e-18;1!UBERON:0000978;8.72e-18;1!UBERON:0002103;8.72e-18;1!UBERON:0001665;8.72e-18;1!UBERON:0003823;8.72e-18;1!UBERON:0000154;8.72e-18;1!UBERON:0010709;8.72e-18;1!UBERON:0000013;3.84e-14;5!UBERON:0002410;3.84e-14;5!UBERON:0003714;1.44e-09;2!UBERON:0005090;1.44e-09;2!UBERON:0001630;1.44e-09;2!UBERON:0000010;2.85e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.44e-18,1;UBERON:0001389,4.44e-18,1;UBERON:0000026,4.44e-18,1;UBERON:0008784,4.44e-18,1;UBERON:0006058,4.44e-18,1;UBERON:0003663,4.44e-18,1;UBERON:0004256,4.44e-18,1;UBERON:0004708,4.44e-18,1;UBERON:0002101,4.44e-18,1;UBERON:0004709,4.44e-18,1;UBERON:0002529,4.44e-18,1;UBERON:0010538,4.44e-18,1;UBERON:0003661,4.44e-18,1;UBERON:0010890,4.44e-18,1;UBERON:0002471,4.44e-18,1;UBERON:0001383,4.44e-18,1;UBERON:0004357,4.44e-18,1;UBERON:0004347,4.44e-18,1;UBERON:0005420,4.44e-18,1;UBERON:0005732,4.44e-18,1;UBERON:0010758,4.44e-18,1;UBERON:0010707,4.44e-18,1;UBERON:0000978,4.44e-18,1;UBERON:0002103,4.44e-18,1;UBERON:0001665,4.44e-18,1;UBERON:0003823,4.44e-18,1;UBERON:0000154,4.44e-18,1;UBERON:0010709,4.44e-18,1;UBERON:0005733,4.44e-18,1;UBERON:0005730,4.44e-18,1;UBERON:0007029,1.44e-17,1;UBERON:0000013,3.60e-14,5;UBERON:0002410,3.60e-14,5;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0003714,1.22e-09,2;UBERON:0000010,2.75e-08,8 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.488105059607853,0.250381861413,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.57265941855896,0,1.86705782949428,5.10179808244039,1.61116493536703,1.67593475391973,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0.496211178389294,1.58284119923659,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0,0,1.45713297917742,0,3.780064728066,0.237840181555137,2.823652050974,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0.752122617877125,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.488105059607853,0.250381861413,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.57265941855896,0,1.86705782949428,5.10179808244039,1.61116493536703,1.67593475391973,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0.484426936895553,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.19024743058172,0.546974809018219,0,0.496211178389294,1.58284119923659,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.078493092850514,0.157115589916002,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0,0,1.45713297917742,0,3.780064728066,0.237840181555137,2.823652050974,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0.752122617877125,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr18:10462163..10462165,+ | |||
}} | }} |
Latest revision as of 23:33, 25 July 2015
Short description: | p@chr18:10462163..10462165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:10462163..10462165, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.44e-18 | 1 |
soleus muscle | 4.44e-18 | 1 |
appendage | 4.44e-18 | 1 |
lower limb segment | 4.44e-18 | 1 |
multi-limb segment region | 4.44e-18 | 1 |
hindlimb muscle | 4.44e-18 | 1 |
hindlimb zeugopod muscle | 4.44e-18 | 1 |
paired limb/fin | 4.44e-18 | 1 |
limb | 4.44e-18 | 1 |
pelvic appendage | 4.44e-18 | 1 |
limb segment | 4.44e-18 | 1 |
paired limb/fin segment | 4.44e-18 | 1 |
limb muscle | 4.44e-18 | 1 |
pelvic complex muscle | 4.44e-18 | 1 |
zeugopod | 4.44e-18 | 1 |
muscle of leg | 4.44e-18 | 1 |
paired limb/fin bud | 4.44e-18 | 1 |
limb bud | 4.44e-18 | 1 |
pelvic appendage bud | 4.44e-18 | 1 |
limb/fin field | 4.44e-18 | 1 |
subdivision of organism along appendicular axis | 4.44e-18 | 1 |
appendage girdle complex | 4.44e-18 | 1 |
leg | 4.44e-18 | 1 |
hindlimb | 4.44e-18 | 1 |
triceps surae | 4.44e-18 | 1 |
hindlimb zeugopod | 4.44e-18 | 1 |
posterior region of body | 4.44e-18 | 1 |
pelvic complex | 4.44e-18 | 1 |
limb field | 4.44e-18 | 1 |
hindlimb/pelvic fin field | 4.44e-18 | 1 |
surface | 1.44e-17 | 1 |
sympathetic nervous system | 3.60e-14 | 5 |
autonomic nervous system | 3.60e-14 | 5 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
neural tissue | 1.22e-09 | 2 |
peripheral nervous system | 2.75e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.14e-59 | 10 |
germ cell and embryonal cancer | 6.75e-27 | 22 |
germ cell cancer | 6.75e-27 | 22 |
neuroendocrine tumor | 5.68e-12 | 6 |
peripheral nerve sheath neoplasm | 1.22e-09 | 2 |
neurofibroma | 1.22e-09 | 2 |
cell type cancer | 7.27e-07 | 143 |
peripheral nervous system neoplasm | 7.70e-07 | 3 |