FFCP PHASE1:Hg19::chr17:9939935..9939990,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:9939935..9939990,-
|short_description=p3@GAS7
|description=CAGE_peak_3_at_GAS7_5end
|association_with_transcript=-57bp_to_ENST00000537970_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=A8KAC2 | |UniProt=A8KAC2 | ||
|association_with_transcript=-57bp_to_ENST00000537970_5end | |||
|cluster_id=chr17:9939935..9939990,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_GAS7_5end | |||
|id=chr17:9939935..9939990,- | |||
|ontology_enrichment_celltype=CL:0002057!6.81e-29!42;CL:0000860!9.23e-26!45;CL:0000766!5.44e-24!76;CL:0002194!2.98e-22!63;CL:0000576!2.98e-22!63;CL:0000040!2.98e-22!63;CL:0000559!2.98e-22!63;CL:0002009!5.64e-21!65;CL:0000839!2.24e-20!70;CL:0000557!8.19e-20!71;CL:0000763!2.04e-12!112;CL:0000049!2.04e-12!112;CL:0000738!9.86e-10!140;CL:0002087!2.03e-08!119;CL:0002031!4.93e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-26;33!CL:0002057;1.71e-26;33!CL:0000473;1.37e-23;39!CL:0000234;1.37e-23;39!CL:0000576;1.67e-20;48!CL:0000766;8.57e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.81e-35,48;CL:0000234,1.81e-35,48;CL:0000860,5.85e-34,42;CL:0002057,5.85e-34,42;CL:0002194,2.65e-28,59;CL:0000576,2.65e-28,59;CL:0000040,2.65e-28,59;CL:0000559,2.65e-28,59;CL:0002009,8.24e-27,61;CL:0000766,9.45e-27,72;CL:0000839,1.71e-23,66;CL:0000557,6.80e-23,67;CL:0000763,6.61e-14,108;CL:0000049,6.61e-14,108;CL:0002087,2.80e-09,115;CL:0000738,8.22e-09,136;CL:0002031,7.78e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-24;42!UBERON:0006601;1.71e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-71!115;UBERON:0001049!6.41e-30!57;UBERON:0005068!6.41e-30!57;UBERON:0006241!6.41e-30!57;UBERON:0007135!6.41e-30!57;UBERON:0002616!2.57e-23!59;UBERON:0003075!6.02e-22!86;UBERON:0007284!6.02e-22!86;UBERON:0003080!6.46e-22!42;UBERON:0002780!1.06e-21!41;UBERON:0001890!1.06e-21!41;UBERON:0006240!1.06e-21!41;UBERON:0002346!5.83e-20!90;UBERON:0001017!1.14e-19!82;UBERON:0000955!3.26e-19!69;UBERON:0006238!3.26e-19!69;UBERON:0005743!7.68e-19!86;UBERON:0002390!9.07e-19!102;UBERON:0003061!9.07e-19!102;UBERON:0002193!1.71e-18!112;UBERON:0002020!1.69e-17!34;UBERON:0003528!1.69e-17!34;UBERON:0001893!1.84e-17!34;UBERON:0002791!1.15e-16!33;UBERON:0000073!3.67e-16!94;UBERON:0001016!3.67e-16!94;UBERON:0001869!1.13e-15!32;UBERON:0002371!1.87e-15!80;UBERON:0001474!5.28e-14!86;UBERON:0002619!4.52e-13!22;UBERON:0003056!6.89e-13!61;UBERON:0001950!1.18e-11!20;UBERON:0002405!1.48e-11!115;UBERON:0004765!4.36e-11!101;UBERON:0001434!4.36e-11!101;UBERON:0000956!1.22e-10!25;UBERON:0000203!1.22e-10!25;UBERON:0000062!2.88e-10!511;UBERON:0000153!1.63e-09!129;UBERON:0007811!1.63e-09!129;UBERON:0003076!4.18e-09!15;UBERON:0003057!4.18e-09!15;UBERON:0002308!5.20e-09!9;UBERON:0000125!5.20e-09!9;UBERON:0000033!6.90e-09!123;UBERON:0002420!1.91e-08!9;UBERON:0007245!1.91e-08!9;UBERON:0010009!1.91e-08!9;UBERON:0010011!1.91e-08!9;UBERON:0000454!1.91e-08!9;UBERON:0004121!4.22e-08!169;UBERON:0002298!5.10e-08!8;UBERON:0004732!1.74e-07!13;UBERON:0000924!1.83e-07!173;UBERON:0006601!1.83e-07!173;UBERON:0009663!3.83e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.05e-18;114!UBERON:0001893;4.25e-18;34!UBERON:0003528;1.06e-17;34!UBERON:0002020;1.06e-17;34!UBERON:0002780;4.29e-17;41!UBERON:0001890;4.29e-17;41!UBERON:0002791;4.69e-17;32!UBERON:0001869;5.50e-17;32!UBERON:0000073;2.92e-16;53!UBERON:0002616;2.92e-16;53!UBERON:0002619;1.49e-15;22!UBERON:0001950;7.11e-14;20!UBERON:0000956;6.45e-13;25!UBERON:0000203;6.45e-13;25!UBERON:0000125;2.22e-10;9!UBERON:0002308;2.22e-10;9!UBERON:0001017;2.96e-10;75!UBERON:0000955;7.84e-10;68!UBERON:0002420;1.02e-09;9!UBERON:0007245;1.02e-09;9!UBERON:0010009;1.02e-09;9!UBERON:0010011;1.02e-09;9!UBERON:0000454;1.02e-09;9!UBERON:0001016;2.24e-08;83!UBERON:0009663;3.56e-08;7!UBERON:0002298;5.22e-08;6!UBERON:0004732;9.40e-08;13!UBERON:0000200;4.42e-07;6!UBERON:0004733;9.72e-07;12!UBERON:0002028;9.72e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.79e-74,114;UBERON:0001049,2.07e-32,56;UBERON:0005068,2.07e-32,56;UBERON:0006241,2.07e-32,56;UBERON:0007135,2.07e-32,56;UBERON:0000073,2.50e-29,53;UBERON:0002616,2.50e-29,53;UBERON:0003075,6.64e-24,82;UBERON:0007284,6.64e-24,82;UBERON:0002780,7.80e-24,41;UBERON:0001890,7.80e-24,41;UBERON:0003080,7.80e-24,41;UBERON:0006240,7.80e-24,41;UBERON:0002346,6.60e-22,86;UBERON:0001017,7.19e-22,81;UBERON:0000955,1.56e-21,68;UBERON:0006238,1.56e-21,68;UBERON:0002390,4.01e-21,98;UBERON:0003061,4.01e-21,98;UBERON:0003528,4.04e-21,34;UBERON:0002020,4.04e-21,34;UBERON:0001893,4.46e-21,34;UBERON:0002193,2.02e-20,108;UBERON:0001016,3.96e-19,89;UBERON:0002791,4.68e-19,32;UBERON:0001869,6.17e-19,32;UBERON:0002371,3.02e-18,76;UBERON:0010371,8.23e-18,104;UBERON:0001474,8.93e-17,82;UBERON:0002405,3.28e-16,93;UBERON:0010314,3.95e-16,132;UBERON:0002619,1.51e-15,22;UBERON:0003056,2.47e-14,61;UBERON:0004765,6.75e-14,90;UBERON:0001950,7.28e-14,20;UBERON:0000956,6.51e-13,25;UBERON:0000203,6.51e-13,25;UBERON:0001434,7.44e-12,100;UBERON:0000923,2.74e-11,560;UBERON:0010316,2.74e-11,560;UBERON:0005291,2.74e-11,560;UBERON:0006598,2.74e-11,560;UBERON:0010317,2.74e-11,560;UBERON:0002532,2.74e-11,560;UBERON:0002050,2.80e-11,564;UBERON:0000922,2.13e-10,592;UBERON:0000125,2.20e-10,9;UBERON:0002308,2.20e-10,9;UBERON:0005423,2.87e-10,581;UBERON:0002420,1.02e-09,9;UBERON:0007245,1.02e-09,9;UBERON:0010009,1.02e-09,9;UBERON:0010011,1.02e-09,9;UBERON:0000454,1.02e-09,9;UBERON:0003076,1.23e-09,15;UBERON:0003057,1.23e-09,15;UBERON:0004121,1.10e-08,171;UBERON:0000924,1.10e-08,171;UBERON:0006601,1.10e-08,171;UBERON:0003081,2.91e-08,203;UBERON:0009663,3.55e-08,7;UBERON:0002298,5.31e-08,6;UBERON:0004732,9.20e-08,13;UBERON:0011216,3.04e-07,223;UBERON:0000200,4.54e-07,6;UBERON:0004733,9.52e-07,12;UBERON:0002028,9.52e-07,12;UBERON:0007277,9.52e-07,12 | |||
|phase1_expression=0.181678379270557,0,1.26858963686374,0,0,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.0821005894499457,0,3.14691421479123,6.90892916574983,11.6112092487057,0,0,0,0,0,0,13.2958898047651,16.0435557976113,12.5866305015194,1.79132379391939,2.91504299417082,1.28787783817093,13.8128326840586,9.06902264853143,12.1292030593908,17.1997487310207,8.63452564845834,10.5300166104335,34.8107794709802,30.2269633704339,21.2834006899727,19.3057581212506,15.4916324060118,16.251178391321,12.9887214284397,9.27880910196676,5.16864014223695,16.8346140803996,11.2325159476633,10.8687311385837,52.4463567296879,35.9034583718937,31.9668562899521,22.9265298516581,10.7803192691317,8.71951148593805,23.1148772036204,19.8163508999677,16.5063521975889,20.5835830895345,11.0483290796269,10.7597211729901,2.95757400836718,4.25208599930087,4.61249020118427,15.1643652047768,17.8710502481393,18.8048936435584,2.28010194992999,1.9891667719909,2.37463399894024,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,0.127986611154418,0,1.18388626022008,0,0,0,0,0,21.4624275105164,2.68511379871414,0,0,0.144846518960824,2.3858578411533,18.4921250715002,0,0,0.087834785693126,8.90657713384446,0,0.370784442784429,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,9.95875313279252,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,1.0366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,1.73239737313289,0.925971025153221,1.52203321787679,0,0,3.20082107913617,1.40402559083543,5.94524649154913,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,8.31822415227414,19.8633981290304,15.2382681373061,10.2643467613623,17.5835012522683,14.716809834352,20.2936767167711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02257091432126,12.6500363689819,0,0,0,0,0,0,0,0.788123040807709,0,0.256686072559497,2.03275699377971,0,0,0.167516265334349,0,0.749007023947182,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,7.65041696654683,10.7857100409308,4.802740101155,0,0,0,1.48864684691266,0,0.280660094433074,1.02511319404561,0,0,1.48418066444991,0,0.355123450626254,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,2.91845782408015,0,0,0,0,3.04468565539302,4.58782324285425,5.69647187174163,2.1440859791201,2.46817363851717,1.94541993357815,4.32025149790492,4.75875105776562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.80907482658071,0,0,0,3.32159762183469,0,0,0,0,0,0,4.54175355742871,0,0,0,0.23874448473769,0.593929361665277,0,9.94147647766298,19.1310406318297,0,0,0,6.37593562403423,8.84108529699673,0,0,0,0,0,0,0.511572370226872,12.0344954877059,4.7896618469388,0,23.2639859062852,46.3840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,17.7148277162768,9.52711865140723,10.6807215421958,7.74054819518572,10.6397142823277,1.97446857438575,0,0,8.0028268843949,0,0,0,0,0.957003479195758,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,6.45740220874376,6.72133159426988,0,0,0,106.830795774373,10.4335094148843,39.8249557733077,0,0,0,3.94584402849391,3.62972148145992,0,10.0466661609296,0,0,0,0,0,0,0,0.277349346026277,0,0,0,9.95942008979572,0,0,0,0,12.7055611599829,15.356566044321,4.51961481561065,0,0,20.1961439099253,0,0,10.4591967422283,0,0,0.114536596165916,0,0,0,0,0,0,0,0,42.6298404983951,63.2502850481008,0,0,0,88.8118036045768,46.0612452263484,72.5051754822582,14.9759250374243,25.3243368400577,38.8318335948858,19.7519409110975,0,0,0.157566364614447,0,0,0,0,12.7236750369489,21.6563415717405,0,0,0,0,0,16.3416307410086,0,1.02447419488958,1.15400093896996,0,0,0,17.8673831593342,23.1732189627901,0,0,0,0,0,0,0,0,0.293104467356165,0,44.4733369883734,47.8682018308538,0,0,8.0090559425771,3.30129040709298,5.38510771951354,8.43482237080316,0,0,0,1.63205341010842,1.0027595760908,2.14441903734423,1.31149052283922,0,9.74674997963685,13.5449154041179,25.0381861413,17.2022758707021,44.3716206147409,65.3254158943354,0,0,61.2662434868257,25.1209493519571,0,0,0,0.74627401443437,0.233713309847224,0.554805861502613,0,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.683878177284,0.194860308839388,0,1.14495775979091,0,0,0,0,0.213383459388282,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3152087100148,7.08482881627925,30.1707993618016,21.9474509737608,0,25.7956551691533,23.7369199078821,165.612527500619,0,0,0,0,0,0,0,3.00841313397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| ||
|short_description=p3@GAS7 | |||
}} | }} |
Latest revision as of 17:35, 18 September 2015
Short description: | p3@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAS7_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -57bp_to_ENST00000537970_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | A8KAC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.81e-35 | 48 |
phagocyte | 1.81e-35 | 48 |
classical monocyte | 5.85e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.85e-34 | 42 |
monopoietic cell | 2.65e-28 | 59 |
monocyte | 2.65e-28 | 59 |
monoblast | 2.65e-28 | 59 |
promonocyte | 2.65e-28 | 59 |
macrophage dendritic cell progenitor | 8.24e-27 | 61 |
myeloid leukocyte | 9.45e-27 | 72 |
myeloid lineage restricted progenitor cell | 1.71e-23 | 66 |
granulocyte monocyte progenitor cell | 6.80e-23 | 67 |
myeloid cell | 6.61e-14 | 108 |
common myeloid progenitor | 6.61e-14 | 108 |
nongranular leukocyte | 2.80e-09 | 115 |
leukocyte | 8.22e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 7.78e-07 | 120 |