FFCP PHASE1:Hg19::chr12:6879706..6879817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5763 | |EntrezGene=5763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9629 | |HGNC=9629 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=147bp_to_DQ894125_5end | |association_with_transcript=147bp_to_DQ894125_5end | ||
|cluster_id=chr12:6879706..6879817,+ | |||
|coexpression_cluster_id=C3322 | |coexpression_cluster_id=C3322 | ||
|description=CAGE_peak_5_at_PTMS_5end | |description=CAGE_peak_5_at_PTMS_5end | ||
|id=chr12:6879706..6879817,+ | |id=chr12:6879706..6879817,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.94e-17!180;CL:0002321!3.32e-14!248;CL:0000220!3.87e-14!246;CL:0000133!1.99e-08!59;CL:0000057!2.89e-08!75;CL:0000222!1.61e-07!119;CL:0000221!3.86e-07!71;CL:0000066!4.32e-07!254 | |ontology_enrichment_celltype=CL:0000055!3.94e-17!180;CL:0002321!3.32e-14!248;CL:0000220!3.87e-14!246;CL:0000133!1.99e-08!59;CL:0000057!2.89e-08!75;CL:0000222!1.61e-07!119;CL:0000221!3.86e-07!71;CL:0000066!4.32e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.46e-14,250;CL:0000133,1.84e-08,59;CL:0000057,2.48e-08,76;CL:0000222,7.36e-08,121;CL:0000221,5.65e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.17e-10!659;UBERON:0000475!3.19e-10!365;UBERON:0000483!5.45e-09!309;UBERON:0000119!1.04e-08!312;UBERON:0000481!1.12e-08!347;UBERON:0000477!3.42e-08!286;UBERON:0002100!3.86e-07!216;UBERON:0000467!6.61e-07!625;UBERON:0000922!8.52e-07!612;UBERON:0000480!8.91e-07!626 | |ontology_enrichment_uberon=UBERON:0000468!1.17e-10!659;UBERON:0000475!3.19e-10!365;UBERON:0000483!5.45e-09!309;UBERON:0000119!1.04e-08!312;UBERON:0000481!1.12e-08!347;UBERON:0000477!3.42e-08!286;UBERON:0002100!3.86e-07!216;UBERON:0000467!6.61e-07!625;UBERON:0000922!8.52e-07!612;UBERON:0000480!8.91e-07!626 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000483,7.00e-09,306;UBERON:0000119,1.34e-08,309 | |||
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| ||
|short_description=p5@PTMS | |short_description=p5@PTMS | ||
}} | }} |
Latest revision as of 03:00, 20 September 2015
Short description: | p5@PTMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTMS_5end |
Coexpression cluster: | C3322_Neurons_Olfactory_parietal_teratocarcinoma_Mesenchymal_occipital_temporal |
Association with transcript: | 147bp_to_DQ894125_5end |
EntrezGene: | PTMS |
HGNC: | 9629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.46e-14 | 250 |
neurectodermal cell | 1.84e-08 | 59 |
fibroblast | 2.48e-08 | 76 |
mesodermal cell | 7.36e-08 | 121 |
ectodermal cell | 5.65e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
epithelium | 7.00e-09 | 306 |
cell layer | 1.34e-08 | 309 |