FFCP PHASE1:Hg19::chr12:6641964..6641975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6641964..6641975,+ | |||
|coexpression_cluster_id=C75 | |coexpression_cluster_id=C75 | ||
|description=CAGE_peak_at_chr12:6641964..6641975,+ | |description=CAGE_peak_at_chr12:6641964..6641975,+ | ||
|id=chr12:6641964..6641975,+ | |id=chr12:6641964..6641975,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.29e-25!140;CL:0000037!3.74e-22!172;CL:0000566!3.74e-22!172;CL:0000988!5.89e-20!182;CL:0002032!4.77e-19!165;CL:0000837!4.77e-19!165;CL:0000766!1.84e-18!76;CL:0002031!4.67e-17!124;CL:0002087!6.66e-16!119;CL:0000860!8.13e-14!45;CL:0002057!8.36e-14!42;CL:0000763!9.56e-14!112;CL:0000049!9.56e-14!112;CL:0000557!1.91e-12!71;CL:0000839!8.88e-12!70;CL:0000094!3.92e-10!8;CL:0002009!5.60e-10!65;CL:0002194!1.13e-09!63;CL:0000576!1.13e-09!63;CL:0000040!1.13e-09!63;CL:0000559!1.13e-09!63;CL:0000134!4.39e-08!358;CL:0002320!5.69e-08!365;CL:0000624!3.73e-07!6;CL:0000048!3.73e-07!430;CL:0000034!6.70e-07!444;CL:0000723!7.20e-07!436 | |ontology_enrichment_celltype=CL:0000738!2.29e-25!140;CL:0000037!3.74e-22!172;CL:0000566!3.74e-22!172;CL:0000988!5.89e-20!182;CL:0002032!4.77e-19!165;CL:0000837!4.77e-19!165;CL:0000766!1.84e-18!76;CL:0002031!4.67e-17!124;CL:0002087!6.66e-16!119;CL:0000860!8.13e-14!45;CL:0002057!8.36e-14!42;CL:0000763!9.56e-14!112;CL:0000049!9.56e-14!112;CL:0000557!1.91e-12!71;CL:0000839!8.88e-12!70;CL:0000094!3.92e-10!8;CL:0002009!5.60e-10!65;CL:0002194!1.13e-09!63;CL:0000576!1.13e-09!63;CL:0000040!1.13e-09!63;CL:0000559!1.13e-09!63;CL:0000134!4.39e-08!358;CL:0002320!5.69e-08!365;CL:0000624!3.73e-07!6;CL:0000048!3.73e-07!430;CL:0000034!6.70e-07!444;CL:0000723!7.20e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000094;6.51e-48;8!CL:0000081;1.53e-34;11!CL:0000767;3.66e-19;3!CL:0000623;9.64e-19;3!CL:0000775;1.42e-18;3!CL:0000771;9.50e-14;2!CL:0000097;3.81e-11;5!CL:0000766;2.94e-07;69!CL:0000037;4.46e-07;1!CL:0001024;4.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.17e-48,8;CL:0000081,1.11e-34,11;CL:0000738,2.53e-24,136;CL:0000037,2.95e-22,168;CL:0002032,1.55e-21,161;CL:0000837,1.55e-21,161;CL:0000988,7.47e-21,177;CL:0000766,5.72e-20,72;CL:0000767,4.41e-19,3;CL:0000623,5.29e-19,3;CL:0000825,5.29e-19,3;CL:0000775,7.60e-19,3;CL:0000763,1.23e-15,108;CL:0000049,1.23e-15,108;CL:0000771,9.52e-14,2;CL:0002031,5.28e-12,120;CL:0000097,2.74e-11,5;CL:0002028,2.74e-11,5;CL:0000134,1.60e-08,354;CL:0002320,3.02e-08,361;CL:0000048,1.50e-07,427;CL:0000723,2.31e-07,433;CL:0000219,2.84e-07,386;CL:0001024,3.02e-07,1;CL:0002087,3.89e-07,115;CL:0000034,4.05e-07,441;CL:0000557,7.93e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.10e-11!80;UBERON:0001474!1.50e-10!86;UBERON:0002390!6.92e-09!102;UBERON:0003061!6.92e-09!102;UBERON:0004765!1.40e-08!101;UBERON:0001434!1.40e-08!101;UBERON:0002193!5.94e-08!112;UBERON:0002405!9.25e-08!115;UBERON:0002384!5.48e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!4.10e-11!80;UBERON:0001474!1.50e-10!86;UBERON:0002390!6.92e-09!102;UBERON:0003061!6.92e-09!102;UBERON:0004765!1.40e-08!101;UBERON:0001434!1.40e-08!101;UBERON:0002193!5.94e-08!112;UBERON:0002405!9.25e-08!115;UBERON:0002384!5.48e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.18e-08,371;UBERON:0002371,3.88e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0.305653622991805,0.246301768349837,0.236132343941038,4.72037132218685,2.30297638858328,2.32224184974114,0,0,0,0,0,1.76160263600908,2.21598163412751,0.601633342410425,1.30206522429511,0,0,0,0.290796477559129,0.755751887377619,0.727752183563449,1.16214518452842,0,0.619412741790207,0.575384784644301,0.256160706529101,1.18241114944293,0.344745680736619,0,0,0.752969358170419,0.545812300115692,0.898893937780338,0.306083892370903,0.641858054152187,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,1.00499466102697,0,0.434377689410233,1.21079900526674,0,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0.300353785683013,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0.560508562981536,0.790152254325231,0.983548850569165,0.786021525498329,3.90642848099067,0.167186495390678,0.651844533267181,0.473447805734733,1.94826728407911,0.668462741311041,0.883817722424512,0.221533894583621,0.812411591295047,0.384273959177026,0.390178042679635,0,0.276350017785848,0,0.296573126324121,0,0,0.226618685395132,0.766440987203842,2.06176467289578,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,2.82249440514625,3.20928234940209,1.01377082717959,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,6.58902087180316,7.75560528296651,0,0,0,0.662045904066094,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0.985326475791887,0.088048434013226,1.4512968087854,2.45003920808834,1.64115163454294,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,1.77327684181734,3.01878604803324,2.82354679815446,0,0,0,0,0,1.49801404789436,2.99161459204025,2.48649308061621,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0.82707210449155,0.647142602455851,0.426910231213777,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0.9266210955196,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0.667396566847634,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.254019996197353,0,0,0,0,0,0,2.32140586367385,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0.105600336519406,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.554645257684261,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0.686520205190771,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.607719912354764,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0,0.41023272848151,0,0.06915725246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| ||
|short_description=p@chr12:6641964..6641975,+ | |short_description=p@chr12:6641964..6641975,+ | ||
}} | }} |
Latest revision as of 11:29, 24 July 2015
Short description: | p@chr12:6641964..6641975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6641964..6641975, + |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.17e-48 | 8 |
blood cell | 1.11e-34 | 11 |
leukocyte | 2.53e-24 | 136 |
hematopoietic stem cell | 2.95e-22 | 168 |
hematopoietic oligopotent progenitor cell | 1.55e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-21 | 161 |
hematopoietic cell | 7.47e-21 | 177 |
myeloid leukocyte | 5.72e-20 | 72 |
basophil | 4.41e-19 | 3 |
natural killer cell | 5.29e-19 | 3 |
pro-NK cell | 5.29e-19 | 3 |
neutrophil | 7.60e-19 | 3 |
myeloid cell | 1.23e-15 | 108 |
common myeloid progenitor | 1.23e-15 | 108 |
eosinophil | 9.52e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 5.28e-12 | 120 |
mast cell | 2.74e-11 | 5 |
basophil mast progenitor cell | 2.74e-11 | 5 |
mesenchymal cell | 1.60e-08 | 354 |
connective tissue cell | 3.02e-08 | 361 |
multi fate stem cell | 1.50e-07 | 427 |
somatic stem cell | 2.31e-07 | 433 |
motile cell | 2.84e-07 | 386 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.02e-07 | 1 |
nongranular leukocyte | 3.89e-07 | 115 |
stem cell | 4.05e-07 | 441 |
granulocyte monocyte progenitor cell | 7.93e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.18e-08 | 371 |
bone marrow | 3.88e-07 | 76 |