FFCP PHASE1:Hg19::chr12:58005204..58005235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115557 | |EntrezGene=115557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30275 | |HGNC=30275 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VW2 | |UniProt=Q86VW2 | ||
|association_with_transcript=0bp_to_ENST00000286494,NM_182947,uc001spa.2,uc001spb.2_5end | |association_with_transcript=0bp_to_ENST00000286494,NM_182947,uc001spa.2,uc001spb.2_5end | ||
|cluster_id=chr12:58005204..58005235,+ | |||
|coexpression_cluster_id=C3308 | |coexpression_cluster_id=C3308 | ||
|description=CAGE_peak_1_at_ARHGEF25_5end | |description=CAGE_peak_1_at_ARHGEF25_5end | ||
|id=chr12:58005204..58005235,+ | |id=chr12:58005204..58005235,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.30e-14!180;CL:0000133!5.58e-07!59 | |ontology_enrichment_celltype=CL:0000055!1.30e-14!180;CL:0000133!5.58e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.86e-07,59;CL:0000393,8.00e-07,61;CL:0000211,8.00e-07,61;CL:0000057,8.62e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.53e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.99e-31!94;UBERON:0001016!2.99e-31!94;UBERON:0001017!7.78e-30!82;UBERON:0005743!7.16e-29!86;UBERON:0000955!5.47e-26!69;UBERON:0006238!5.47e-26!69;UBERON:0001049!3.72e-25!57;UBERON:0005068!3.72e-25!57;UBERON:0006241!3.72e-25!57;UBERON:0007135!3.72e-25!57;UBERON:0002346!9.05e-25!90;UBERON:0000924!3.04e-24!173;UBERON:0006601!3.04e-24!173;UBERON:0002616!8.86e-24!59;UBERON:0003075!1.77e-23!86;UBERON:0007284!1.77e-23!86;UBERON:0004121!5.44e-23!169;UBERON:0000475!8.98e-21!365;UBERON:0003080!1.65e-19!42;UBERON:0000033!2.34e-19!123;UBERON:0002780!5.34e-19!41;UBERON:0001890!5.34e-19!41;UBERON:0006240!5.34e-19!41;UBERON:0007023!7.85e-19!115;UBERON:0002020!3.60e-18!34;UBERON:0003528!3.60e-18!34;UBERON:0001869!5.97e-18!32;UBERON:0001893!1.20e-17!34;UBERON:0000153!2.02e-17!129;UBERON:0007811!2.02e-17!129;UBERON:0003056!2.68e-17!61;UBERON:0002791!4.39e-17!33;UBERON:0002619!7.38e-16!22;UBERON:0000956!1.50e-15!25;UBERON:0000203!1.50e-15!25;UBERON:0000481!1.23e-14!347;UBERON:0001950!1.70e-14!20;UBERON:0000025!1.86e-12!194;UBERON:0004111!7.44e-12!241;UBERON:0000119!9.36e-12!312;UBERON:0000483!9.41e-12!309;UBERON:0000468!3.54e-10!659;UBERON:0000477!1.46e-09!286;UBERON:0000922!1.02e-08!612;UBERON:0000064!1.17e-08!219;UBERON:0002050!5.20e-08!605;UBERON:0005423!5.20e-08!605;UBERON:0000923!8.76e-08!604;UBERON:0005291!8.76e-08!604;UBERON:0006598!8.76e-08!604;UBERON:0002532!8.76e-08!604;UBERON:0000467!4.23e-07!625;UBERON:0000480!5.38e-07!626;UBERON:0003076!7.31e-07!15;UBERON:0003057!7.31e-07!15 | |ontology_enrichment_uberon=UBERON:0000073!2.99e-31!94;UBERON:0001016!2.99e-31!94;UBERON:0001017!7.78e-30!82;UBERON:0005743!7.16e-29!86;UBERON:0000955!5.47e-26!69;UBERON:0006238!5.47e-26!69;UBERON:0001049!3.72e-25!57;UBERON:0005068!3.72e-25!57;UBERON:0006241!3.72e-25!57;UBERON:0007135!3.72e-25!57;UBERON:0002346!9.05e-25!90;UBERON:0000924!3.04e-24!173;UBERON:0006601!3.04e-24!173;UBERON:0002616!8.86e-24!59;UBERON:0003075!1.77e-23!86;UBERON:0007284!1.77e-23!86;UBERON:0004121!5.44e-23!169;UBERON:0000475!8.98e-21!365;UBERON:0003080!1.65e-19!42;UBERON:0000033!2.34e-19!123;UBERON:0002780!5.34e-19!41;UBERON:0001890!5.34e-19!41;UBERON:0006240!5.34e-19!41;UBERON:0007023!7.85e-19!115;UBERON:0002020!3.60e-18!34;UBERON:0003528!3.60e-18!34;UBERON:0001869!5.97e-18!32;UBERON:0001893!1.20e-17!34;UBERON:0000153!2.02e-17!129;UBERON:0007811!2.02e-17!129;UBERON:0003056!2.68e-17!61;UBERON:0002791!4.39e-17!33;UBERON:0002619!7.38e-16!22;UBERON:0000956!1.50e-15!25;UBERON:0000203!1.50e-15!25;UBERON:0000481!1.23e-14!347;UBERON:0001950!1.70e-14!20;UBERON:0000025!1.86e-12!194;UBERON:0004111!7.44e-12!241;UBERON:0000119!9.36e-12!312;UBERON:0000483!9.41e-12!309;UBERON:0000468!3.54e-10!659;UBERON:0000477!1.46e-09!286;UBERON:0000922!1.02e-08!612;UBERON:0000064!1.17e-08!219;UBERON:0002050!5.20e-08!605;UBERON:0005423!5.20e-08!605;UBERON:0000923!8.76e-08!604;UBERON:0005291!8.76e-08!604;UBERON:0006598!8.76e-08!604;UBERON:0002532!8.76e-08!604;UBERON:0000467!4.23e-07!625;UBERON:0000480!5.38e-07!626;UBERON:0003076!7.31e-07!15;UBERON:0003057!7.31e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.22e-16;32!UBERON:0002619;3.73e-16;22!UBERON:0003528;3.88e-16;34!UBERON:0002020;3.88e-16;34!UBERON:0002791;5.19e-16;32!UBERON:0000956;7.60e-16;25!UBERON:0000203;7.60e-16;25!UBERON:0001893;1.47e-15;34!UBERON:0001950;9.14e-15;20!UBERON:0002780;3.54e-14;41!UBERON:0001890;3.54e-14;41!UBERON:0000073;1.82e-13;53!UBERON:0002616;1.82e-13;53!UBERON:0000955;4.79e-12;68!UBERON:0001017;5.40e-12;75!UBERON:0001016;1.14e-11;83!UBERON:0011216;5.74e-07;132 | |||
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|short_description=p1@ARHGEF25 | |short_description=p1@ARHGEF25 | ||
}} | }} |
Latest revision as of 15:39, 19 September 2015
Short description: | p1@ARHGEF25 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF25_5end |
Coexpression cluster: | C3308_hippocampus_medial_cerebellum_middle_occipital_parietal_olfactory |
Association with transcript: | 0bp_to_ENST00000286494, NM_182947, uc001spa.2, uc001spb.2_5end |
EntrezGene: | ARHGEF25 |
HGNC: | 30275 |
UniProt: | Q86VW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neurectodermal cell | 3.86e-07 | 59 |
electrically responsive cell | 8.00e-07 | 61 |
electrically active cell | 8.00e-07 | 61 |
fibroblast | 8.62e-07 | 76 |