FFCP PHASE1:Hg19::chr12:58004058..58004075,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115557 | |EntrezGene=115557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30275 | |HGNC=30275 | ||
|TSSclassifier=strong | |||
|UniProt=Q96M35 | |UniProt=Q96M35 | ||
|association_with_transcript=-25bp_to_uc001soz.1_5end | |association_with_transcript=-25bp_to_uc001soz.1_5end | ||
|cluster_id=chr12:58004058..58004075,+ | |||
|coexpression_cluster_id=C2225 | |coexpression_cluster_id=C2225 | ||
|description=CAGE_peak_5_at_ARHGEF25_5end | |description=CAGE_peak_5_at_ARHGEF25_5end | ||
|id=chr12:58004058..58004075,+ | |id=chr12:58004058..58004075,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.19e-07;3!UBERON:0003057;1.19e-07;3!UBERON:0004874;7.34e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.81e-49!115;UBERON:0001049!1.04e-19!57;UBERON:0005068!1.04e-19!57;UBERON:0006241!1.04e-19!57;UBERON:0007135!1.04e-19!57;UBERON:0003075!2.98e-18!86;UBERON:0007284!2.98e-18!86;UBERON:0002616!6.77e-17!59;UBERON:0002346!7.68e-17!90;UBERON:0001017!1.72e-16!82;UBERON:0005743!2.78e-16!86;UBERON:0003080!1.57e-14!42;UBERON:0002780!1.20e-13!41;UBERON:0001890!1.20e-13!41;UBERON:0006240!1.20e-13!41;UBERON:0000955!1.25e-13!69;UBERON:0006238!1.25e-13!69;UBERON:0000073!1.43e-13!94;UBERON:0001016!1.43e-13!94;UBERON:0000481!9.30e-13!347;UBERON:0001893!1.07e-11!34;UBERON:0003056!2.74e-11!61;UBERON:0000153!4.32e-11!129;UBERON:0007811!4.32e-11!129;UBERON:0002791!4.38e-11!33;UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0001869!3.02e-10!32;UBERON:0000062!3.47e-10!511;UBERON:0000033!3.74e-10!123;UBERON:0000475!5.14e-10!365;UBERON:0000477!1.13e-09!286;UBERON:0000468!1.66e-09!659;UBERON:0004121!4.50e-09!169;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0000922!2.43e-08!612;UBERON:0004111!5.58e-08!241;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0000467!1.22e-07!625;UBERON:0003103!1.30e-07!69;UBERON:0000119!1.38e-07!312;UBERON:0000480!1.43e-07!626;UBERON:0000483!1.69e-07!309;UBERON:0000025!1.74e-07!194;UBERON:0000059!3.73e-07!11;UBERON:0002050!3.76e-07!605;UBERON:0005423!3.76e-07!605;UBERON:0001155!6.24e-07!9;UBERON:0000923!9.65e-07!604;UBERON:0005291!9.65e-07!604;UBERON:0006598!9.65e-07!604;UBERON:0002532!9.65e-07!604 | |ontology_enrichment_uberon=UBERON:0007023!1.81e-49!115;UBERON:0001049!1.04e-19!57;UBERON:0005068!1.04e-19!57;UBERON:0006241!1.04e-19!57;UBERON:0007135!1.04e-19!57;UBERON:0003075!2.98e-18!86;UBERON:0007284!2.98e-18!86;UBERON:0002616!6.77e-17!59;UBERON:0002346!7.68e-17!90;UBERON:0001017!1.72e-16!82;UBERON:0005743!2.78e-16!86;UBERON:0003080!1.57e-14!42;UBERON:0002780!1.20e-13!41;UBERON:0001890!1.20e-13!41;UBERON:0006240!1.20e-13!41;UBERON:0000955!1.25e-13!69;UBERON:0006238!1.25e-13!69;UBERON:0000073!1.43e-13!94;UBERON:0001016!1.43e-13!94;UBERON:0000481!9.30e-13!347;UBERON:0001893!1.07e-11!34;UBERON:0003056!2.74e-11!61;UBERON:0000153!4.32e-11!129;UBERON:0007811!4.32e-11!129;UBERON:0002791!4.38e-11!33;UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0001869!3.02e-10!32;UBERON:0000062!3.47e-10!511;UBERON:0000033!3.74e-10!123;UBERON:0000475!5.14e-10!365;UBERON:0000477!1.13e-09!286;UBERON:0000468!1.66e-09!659;UBERON:0004121!4.50e-09!169;UBERON:0000924!1.51e-08!173;UBERON:0006601!1.51e-08!173;UBERON:0000922!2.43e-08!612;UBERON:0004111!5.58e-08!241;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0000467!1.22e-07!625;UBERON:0003103!1.30e-07!69;UBERON:0000119!1.38e-07!312;UBERON:0000480!1.43e-07!626;UBERON:0000483!1.69e-07!309;UBERON:0000025!1.74e-07!194;UBERON:0000059!3.73e-07!11;UBERON:0002050!3.76e-07!605;UBERON:0005423!3.76e-07!605;UBERON:0001155!6.24e-07!9;UBERON:0000923!9.65e-07!604;UBERON:0005291!9.65e-07!604;UBERON:0006598!9.65e-07!604;UBERON:0002532!9.65e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;7.49e-12;11!UBERON:0003101;4.08e-08;22!UBERON:0000079;4.08e-08;22!UBERON:0006947;5.59e-08;3!UBERON:0004054;5.59e-08;3!UBERON:0002240;1.19e-07;3!UBERON:0005174;1.19e-07;3!UBERON:0001137;1.19e-07;3!UBERON:0007023;1.65e-07;114!UBERON:0006834;5.57e-07;1!UBERON:0005795;7.34e-07;1!UBERON:0001000;7.34e-07;1!UBERON:0000989;7.34e-07;1!UBERON:0008811;7.34e-07;1!UBERON:0002426;7.34e-07;1!UBERON:0003831;7.34e-07;1!UBERON:0003898;7.34e-07;1!UBERON:0004830;7.34e-07;1!UBERON:0003830;7.34e-07;1!UBERON:0005175;7.34e-07;1!UBERON:0001774;7.34e-07;1!UBERON:0001103;7.34e-07;1!UBERON:0005352;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.37e-21,114;UBERON:0003135,8.23e-12,11;UBERON:0003101,4.15e-08,22;UBERON:0000079,4.15e-08,22;UBERON:0006947,5.22e-08,3;UBERON:0004054,5.22e-08,3;UBERON:0002240,9.40e-08,3;UBERON:0005174,9.40e-08,3;UBERON:0001137,9.40e-08,3;UBERON:0003133,1.84e-07,48;UBERON:0005156,3.32e-07,59;UBERON:0000990,3.32e-07,59;UBERON:0006834,5.58e-07,1;UBERON:0000989,6.23e-07,1;UBERON:0008811,6.23e-07,1;UBERON:0006258,6.23e-07,1;UBERON:0005876,6.23e-07,1;UBERON:0004874,6.23e-07,1;UBERON:0001000,6.96e-07,1;UBERON:0005352,6.96e-07,1;UBERON:0002426,8.21e-07,1;UBERON:0003831,8.21e-07,1;UBERON:0003898,8.21e-07,1;UBERON:0004830,8.21e-07,1;UBERON:0003830,8.21e-07,1;UBERON:0005175,8.21e-07,1;UBERON:0001774,8.21e-07,1;UBERON:0001103,8.21e-07,1;UBERON:0010084,8.21e-07,1;UBERON:0000996,9.67e-07,1 | |||
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| ||
|short_description=p5@ARHGEF25 | |short_description=p5@ARHGEF25 | ||
}} | }} |
Latest revision as of 15:37, 19 September 2015
Short description: | p5@ARHGEF25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGEF25_5end |
Coexpression cluster: | C2225_uterus_smooth_ductus_cervix_prostate_heart_umbilical |
Association with transcript: | -25bp_to_uc001soz.1_5end |
EntrezGene: | ARHGEF25 |
HGNC: | 30275 |
UniProt: | Q96M35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.37e-21 | 114 |
male reproductive organ | 8.23e-12 | 11 |
male organism | 4.15e-08 | 22 |
male reproductive system | 4.15e-08 | 22 |
male genital duct | 5.22e-08 | 3 |
internal male genitalia | 5.22e-08 | 3 |
spinal cord | 9.40e-08 | 3 |
dorsal region element | 9.40e-08 | 3 |
dorsum | 9.40e-08 | 3 |
reproductive organ | 1.84e-07 | 48 |
reproductive structure | 3.32e-07 | 59 |
reproductive system | 3.32e-07 | 59 |
uterus or analog | 5.58e-07 | 1 |
penis | 6.23e-07 | 1 |
intromittent organ | 6.23e-07 | 1 |
lateral plate mesenchyme | 6.23e-07 | 1 |
undifferentiated genital tubercle | 6.23e-07 | 1 |
somatopleure | 6.23e-07 | 1 |
vas deferens | 6.96e-07 | 1 |
spermatic cord | 6.96e-07 | 1 |
chest muscle | 8.21e-07 | 1 |
respiratory system muscle | 8.21e-07 | 1 |
skeletal muscle of trunk | 8.21e-07 | 1 |
respiratory system skeletal muscle | 8.21e-07 | 1 |
thoracic segment muscle | 8.21e-07 | 1 |
chest organ | 8.21e-07 | 1 |
muscle of trunk | 8.21e-07 | 1 |
diaphragm | 8.21e-07 | 1 |
future diaphragm | 8.21e-07 | 1 |
vagina | 9.67e-07 | 1 |