FFCP PHASE1:Hg19::chr12:48277143..48277154,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7421 | |EntrezGene=7421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12679 | |HGNC=12679 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVY8 | |UniProt=F8VVY8 | ||
|association_with_transcript=-425bp_to_ENST00000550314_5end | |association_with_transcript=-425bp_to_ENST00000550314_5end | ||
|cluster_id=chr12:48277143..48277154,- | |||
|coexpression_cluster_id=C1361 | |coexpression_cluster_id=C1361 | ||
|description=CAGE_peak_10_at_VDR_5end | |description=CAGE_peak_10_at_VDR_5end | ||
|id=chr12:48277143..48277154,- | |id=chr12:48277143..48277154,- | ||
|ontology_enrichment_celltype=CL:0000080!3.79e-14!6;CL:0000838!1.79e-11!52;CL:0000542!3.26e-11!53;CL:0000051!3.26e-11!53;CL:0000945!2.84e-09!24;CL:0000826!2.84e-09!24 | |ontology_enrichment_celltype=CL:0000080!3.79e-14!6;CL:0000838!1.79e-11!52;CL:0000542!3.26e-11!53;CL:0000051!3.26e-11!53;CL:0000945!2.84e-09!24;CL:0000826!2.84e-09!24 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.46e-12!15;UBERON:0000179!6.46e-12!15;UBERON:0000463!6.46e-12!15 | |ontology_enrichment_uberon=UBERON:0000178!6.46e-12!15;UBERON:0000179!6.46e-12!15;UBERON:0000463!6.46e-12!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-15;15!UBERON:0000179;1.72e-15;15!UBERON:0000463;1.72e-15;15!UBERON:0002331;7.29e-11;10!UBERON:0002390;4.38e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.44e-15,15;UBERON:0000179,1.44e-15,15;UBERON:0000463,1.44e-15,15;UBERON:0002331,5.98e-11,10;UBERON:0000358,5.98e-11,10;UBERON:0000307,5.98e-11,10;UBERON:0000091,5.98e-11,10;UBERON:0000087,5.98e-11,10;UBERON:0007010,5.98e-11,10;UBERON:0007806,5.98e-11,10;UBERON:0008780,5.98e-11,10;UBERON:0005728,5.98e-11,10 | |||
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|short_description=p10@VDR | |short_description=p10@VDR | ||
}} | }} |
Latest revision as of 13:25, 18 September 2015
Short description: | p10@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_VDR_5end |
Coexpression cluster: | C1361_CD4_cord_mycosis_hairy_CD8_Whole_thymus |
Association with transcript: | -425bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.44e-15 | 15 |
haemolymphatic fluid | 1.44e-15 | 15 |
organism substance | 1.44e-15 | 15 |
umbilical cord | 5.98e-11 | 10 |
blastocyst | 5.98e-11 | 10 |
blastula | 5.98e-11 | 10 |
bilaminar disc | 5.98e-11 | 10 |
inner cell mass | 5.98e-11 | 10 |
cleaving embryo | 5.98e-11 | 10 |
connecting stalk | 5.98e-11 | 10 |
inner cell mass derived epiblast | 5.98e-11 | 10 |
extraembryonic mesoderm | 5.98e-11 | 10 |