FFCP PHASE1:Hg19::chr12:47759534..47759544,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47759534..47759544,- | |||
|coexpression_cluster_id=C98 | |coexpression_cluster_id=C98 | ||
|description=CAGE_peak_at_chr12:47759534..47759544,- | |description=CAGE_peak_at_chr12:47759534..47759544,- | ||
|id=chr12:47759534..47759544,- | |id=chr12:47759534..47759544,- | ||
|ontology_enrichment_celltype=CL:0000791!7.72e-50!18;CL:0000789!7.72e-50!18;CL:0002420!7.72e-50!18;CL:0002419!7.72e-50!18;CL:0000790!7.72e-50!18;CL:0000084!6.30e-46!25;CL:0000827!6.30e-46!25;CL:0000625!4.99e-35!11;CL:0000080!3.34e-27!6;CL:0000838!6.59e-23!52;CL:0000542!2.12e-22!53;CL:0000051!2.12e-22!53;CL:0000624!1.82e-19!6;CL:0000842!1.17e-14!3;CL:0002087!9.81e-13!119;CL:0000224!4.04e-11!4;CL:0000738!3.92e-10!140;CL:0000988!1.75e-09!182;CL:0002031!2.25e-08!124;CL:0000037!2.07e-07!172;CL:0000566!2.07e-07!172;CL:0000898!3.28e-07!3 | |ontology_enrichment_celltype=CL:0000791!7.72e-50!18;CL:0000789!7.72e-50!18;CL:0002420!7.72e-50!18;CL:0002419!7.72e-50!18;CL:0000790!7.72e-50!18;CL:0000084!6.30e-46!25;CL:0000827!6.30e-46!25;CL:0000625!4.99e-35!11;CL:0000080!3.34e-27!6;CL:0000838!6.59e-23!52;CL:0000542!2.12e-22!53;CL:0000051!2.12e-22!53;CL:0000624!1.82e-19!6;CL:0000842!1.17e-14!3;CL:0002087!9.81e-13!119;CL:0000224!4.04e-11!4;CL:0000738!3.92e-10!140;CL:0000988!1.75e-09!182;CL:0002031!2.25e-08!124;CL:0000037!2.07e-07!172;CL:0000566!2.07e-07!172;CL:0000898!3.28e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.11e-58;11!CL:0000791;1.67e-46;18!CL:0000789;1.67e-46;18!CL:0002419;1.67e-46;18!CL:0000084;5.30e-42;25!CL:0000542;7.40e-11;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.35e-59,11;CL:0000791,1.53e-46,18;CL:0000789,1.53e-46,18;CL:0002420,1.53e-46,18;CL:0002419,1.53e-46,18;CL:0000790,1.53e-46,18;CL:0000084,4.48e-42,25;CL:0000827,4.48e-42,25;CL:0000838,8.28e-20,52;CL:0000542,2.03e-19,53;CL:0000051,2.03e-19,53;CL:0002087,2.35e-10,115;CL:0000738,1.38e-08,136;CL:0002031,5.82e-08,120;CL:0000037,9.98e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;1.67e-46;18!CL:0000051;7.40e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.41e-14;1!DOID:0060061;2.41e-14;1!DOID:8691;2.41e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.84e-14,1;DOID:0060061,1.84e-14,1;DOID:8691,1.84e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.56e-51!15;UBERON:0000179!5.56e-51!15;UBERON:0000463!5.56e-51!15;UBERON:0002390!2.28e-09!102;UBERON:0003061!2.28e-09!102;UBERON:0002193!2.38e-09!112 | |ontology_enrichment_uberon=UBERON:0000178!5.56e-51!15;UBERON:0000179!5.56e-51!15;UBERON:0000463!5.56e-51!15;UBERON:0002390!2.28e-09!102;UBERON:0003061!2.28e-09!102;UBERON:0002193!2.38e-09!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.73e-31;15!UBERON:0000179;2.73e-31;15!UBERON:0000463;2.73e-31;15!UBERON:0002390;1.02e-13;32!UBERON:0002193;3.42e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.28e-31,15;UBERON:0000179,3.28e-31,15;UBERON:0000463,3.28e-31,15 | |||
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|short_description=p@chr12:47759534..47759544,- | |short_description=p@chr12:47759534..47759544,- | ||
}} | }} |
Latest revision as of 08:46, 24 July 2015
Short description: | p@chr12:47759534..47759544, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47759534..47759544, - |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.35e-59 | 11 |
mature alpha-beta T cell | 1.53e-46 | 18 |
alpha-beta T cell | 1.53e-46 | 18 |
immature T cell | 1.53e-46 | 18 |
mature T cell | 1.53e-46 | 18 |
immature alpha-beta T cell | 1.53e-46 | 18 |
T cell | 4.48e-42 | 25 |
pro-T cell | 4.48e-42 | 25 |
lymphoid lineage restricted progenitor cell | 8.28e-20 | 52 |
lymphocyte | 2.03e-19 | 53 |
common lymphoid progenitor | 2.03e-19 | 53 |
nongranular leukocyte | 2.35e-10 | 115 |
leukocyte | 1.38e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 5.82e-08 | 120 |
hematopoietic stem cell | 9.98e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 3.28e-31 | 15 |
haemolymphatic fluid | 3.28e-31 | 15 |
organism substance | 3.28e-31 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.84e-14 | 1 |
cutaneous T cell lymphoma | 1.84e-14 | 1 |
mycosis fungoides | 1.84e-14 | 1 |