FFCP PHASE1:Hg19::chr12:28123206..28123229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZD9 | |UniProt=F5GZD9 | ||
|association_with_transcript=0bp_to_ENST00000542963_5end | |association_with_transcript=0bp_to_ENST00000542963_5end | ||
|cluster_id=chr12:28123206..28123229,- | |||
|coexpression_cluster_id=C1359 | |coexpression_cluster_id=C1359 | ||
|description=CAGE_peak_3_at_PTHLH_5end | |description=CAGE_peak_3_at_PTHLH_5end | ||
|id=chr12:28123206..28123229,- | |id=chr12:28123206..28123229,- | ||
|ontology_enrichment_celltype=CL:0000066!2.54e-10!254;CL:0002076!2.06e-09!43;CL:0000076!1.13e-07!62;CL:0002368!1.21e-07!13;CL:0000220!1.73e-07!246;CL:0002321!3.22e-07!248 | |ontology_enrichment_celltype=CL:0000066!2.54e-10!254;CL:0002076!2.06e-09!43;CL:0000076!1.13e-07!62;CL:0002368!1.21e-07!13;CL:0000220!1.73e-07!246;CL:0002321!3.22e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.56e-08;13!CL:0002076;3.49e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,8.38e-11,42;CL:0002368,1.66e-08,13;CL:0000066,2.35e-08,253;CL:0000223,5.64e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.45e-07!14 | |ontology_enrichment_disease=DOID:1749!2.45e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.86e-07;14!DOID:2394;3.07e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.71e-07,14;DOID:2394,3.46e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.90e-11!365;UBERON:0004111!1.80e-10!241;UBERON:0000033!8.17e-10!123;UBERON:0000468!2.20e-09!659;UBERON:0000467!2.79e-09!625;UBERON:0000477!3.00e-09!286;UBERON:0004121!4.19e-09!169;UBERON:0000480!4.33e-09!626;UBERON:0000153!4.60e-09!129;UBERON:0007811!4.60e-09!129;UBERON:0000924!5.57e-09!173;UBERON:0006601!5.57e-09!173;UBERON:0000483!1.81e-08!309;UBERON:0000119!4.99e-08!312;UBERON:0002050!1.21e-07!605;UBERON:0005423!1.21e-07!605;UBERON:0000922!1.28e-07!612;UBERON:0000923!1.86e-07!604;UBERON:0005291!1.86e-07!604;UBERON:0006598!1.86e-07!604;UBERON:0002532!1.86e-07!604;UBERON:0000025!1.86e-07!194;UBERON:0004119!2.05e-07!169;UBERON:0000925!2.05e-07!169;UBERON:0006595!2.05e-07!169;UBERON:0000481!2.45e-07!347;UBERON:0001637!2.55e-07!42;UBERON:0003509!2.55e-07!42;UBERON:0004572!2.55e-07!42;UBERON:0003102!4.45e-07!95 | |ontology_enrichment_uberon=UBERON:0000475!1.90e-11!365;UBERON:0004111!1.80e-10!241;UBERON:0000033!8.17e-10!123;UBERON:0000468!2.20e-09!659;UBERON:0000467!2.79e-09!625;UBERON:0000477!3.00e-09!286;UBERON:0004121!4.19e-09!169;UBERON:0000480!4.33e-09!626;UBERON:0000153!4.60e-09!129;UBERON:0007811!4.60e-09!129;UBERON:0000924!5.57e-09!173;UBERON:0006601!5.57e-09!173;UBERON:0000483!1.81e-08!309;UBERON:0000119!4.99e-08!312;UBERON:0002050!1.21e-07!605;UBERON:0005423!1.21e-07!605;UBERON:0000922!1.28e-07!612;UBERON:0000923!1.86e-07!604;UBERON:0005291!1.86e-07!604;UBERON:0006598!1.86e-07!604;UBERON:0002532!1.86e-07!604;UBERON:0000025!1.86e-07!194;UBERON:0004119!2.05e-07!169;UBERON:0000925!2.05e-07!169;UBERON:0006595!2.05e-07!169;UBERON:0000481!2.45e-07!347;UBERON:0001637!2.55e-07!42;UBERON:0003509!2.55e-07!42;UBERON:0004572!2.55e-07!42;UBERON:0003102!4.45e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.65e-08;12!UBERON:0000992;9.08e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.45e-07,171;UBERON:0000924,2.45e-07,171;UBERON:0006601,2.45e-07,171;UBERON:0003100,7.40e-07,41;UBERON:0004111,7.89e-07,240 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0.872338524100369,0,3.79031924056099,0.522371256399677,1.47440361900905,0,1.96597234917155,0.791300934685361,0.247532705920093,0.994192127183747,0,2.41077811209591,0.730310090387373,0.487932798790507,1.35433163884467,0.408001382488506,1.88072832886853,3.14859585844162,5.74872585306114,3.01302335027527,0,0,0,0,0,0.309632246632152,33.0991640812414,31.325415552938,37.3451550268456,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.722878304769133,3.00802746381534,2.462390822334,3.1811437882044,7.78615792484217,1.70162670895322,1.77383517970051,1.31752178539689,0.982343066232845,29.8722136399885,23.7302043382035,0,0,0,0,0,0,1.19257444420023,0.860234595106124,4.51282652089873,6.78369530308812,12.1654836500873,0.275118041940067,2.71693456497854,0.516833518338658,0,0.66944122552934,0,0,0.24406205754817,0.735326160691737,4.0507097394088,0.446498641420399,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,39.6845587449706,1.98788780678127,0.633152558322899,0.529636723252875,2.29469296599051,3.54668382198357,0.560677600142307,2.1349799145941,3.7000132262574,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0.576175924479999,0.937285727335186,0.624320153660641,2.2818872861778,2.83952493048422,0,0.161872944368132,0,0,0,0.826606249406124,22.572054288359,22.0067567057916,0,0,0.336672227908132,0.250237039743928,0,0.877955241761676,0.30648779579902,55.137367618721,0.113432183160021,2.51145489964407,0.213557388818567,1.05965950579781,2.40072876867522,0.309157587715317,1.28820270022815,0.37223371266318,1.35021065793013,0.194874010322397,0.252433774244115,0.736399189138395,3.55621325001386,6.39017266529906,0.503760491138201,0.508681776931463,36.3330403946998,42.821140932761,42.1602755221836,0.121973706129595,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.435758888184812,0,0.539325232640658,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,44.2293650196761,33.7205259772859,43.2274581370013,50.4607026113986,0.325808305310325,0,0,6.4921026786043,0.939269553886573,0,0,0,0.790204397959275,0.858486162094873,0,0,0,45.9295786535207,45.0192103572944,37.2868505747476,11.7321664740731,17.1474023723238,19.935899316591,0,0,0,0,0,0.63497894292169,0.381988425558278,0,1.71072446022705,0.411309970813294,0.300343057843917,0,0.224262168690721,0,0,4.65378176728,3.57656445851882,0,2.6593811658487,0,0,0,0,2.57360388584666,1.08524321078289,0,0,1.42156779497018,0,3.31583314765545,3.48613383440118,5.69846049737725,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0.215627574859517,0,5.33598710867173,1.30139853857622,8.50617694055465,1.34013012267479,4.46557126157214,0,0,0,0.858840442033979,0.500170521059677,0,0.623912584592421,0.356857977594324,0.157702415033935,1.63997980989798,1.50473049863859,0,4.1389228517002,2.65690239414175,4.79359838208428,0.173767228936166,0,0.343143423810856,0,0,0,6.97193414326397,1.66435439510497,4.83824469327489,0.744323423456331,1.07423381301644,1.12264037773229,0,0,0.160853921143607,0,0.616838775210622,3.55123450626254,2.79232330446951,3.11552657510173,1.97557643381931,0,54.5377599224935,23.2044092118459,2.29628896329214,1.27463817604702,3.93373244878272,0.451199612907412,0.15403067420883,0,2.92278449306521,1.58327443339314,0,0.510281115829547,0,0,0,0,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0.256450125116389,0,1.30151357865721,0.309123034943167,1.46511143709349,0.660075999364704,32.7331356657818,31.202891809753,0,0.386682873168488,0.462145851343933,0.614014698904518,0.137836572484531,0,0,0.426133137080504,0.356128142586949,28.2637205267273,45.3568558981651,33.0516925360973,21.1419761988099,0.464845549297286,1.25924938732256,1.3940745403212,2.15623506123262,1.59691809095107,0.869932992075073,1.48259375283136,5.72499546967965,0,0,0.571890581771475,0,0,5.09125196681499,3.92474320099615,0,0.274537029736055,0,2.22400729730648,4.75530963519025,2.10629228119491,0,38.2630178721117,2.11300293513511,0.272999822815972,2.40389234321312,11.3008116620243,14.3354989321992,1.99031692572366,3.94605796728386,0,0,2.63783490051515,3.717881977197,2.25356482025793,0,0.0982490410131212,1.07001315444375,0,5.9110137883346,19.0991037916743,0.379473173765715,5.59895552391973,27.9044126903985,54.2944843183988,60.9789515223407,0.188287601553558,41.7590211491093,60.6497312403452,52.3247581173277,31.2423824281465,0,0,0,0,0,0,0,0,0,0,71.5517430664613,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,3.40963376167696,46.3164300391119,8.01804638248124,31.0232309120224,6.95903353436409,2.95405774462077,3.00533503561846,0,0.63337622438398,7.17292757703851,3.86797481743607,0,36.5099196532693,0,0.622079175323615,5.39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| ||
|short_description=p3@PTHLH | |short_description=p3@PTHLH | ||
}} | }} |
Latest revision as of 00:46, 18 September 2015
Short description: | p3@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTHLH_5end |
Coexpression cluster: | C1359_acantholytic_Mallassezderived_maxillary_renal_gastric_amniotic_Prostate |
Association with transcript: | 0bp_to_ENST00000542963_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | F5GZD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.38e-11 | 42 |
respiratory epithelial cell | 1.66e-08 | 13 |
epithelial cell | 2.35e-08 | 253 |
endodermal cell | 5.64e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.45e-07 | 171 |
ectoderm | 2.45e-07 | 171 |
presumptive ectoderm | 2.45e-07 | 171 |
female organism | 7.40e-07 | 41 |
anatomical conduit | 7.89e-07 | 240 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.71e-07 | 14 |
ovarian cancer | 3.46e-07 | 14 |