FFCP PHASE1:Hg19::chr12:27613673..27613722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:27613673..27613722,- | |||
|coexpression_cluster_id=C307 | |coexpression_cluster_id=C307 | ||
|description=CAGE_peak_at_chr12:27613673..27613722,- | |description=CAGE_peak_at_chr12:27613673..27613722,- | ||
|id=chr12:27613673..27613722,- | |id=chr12:27613673..27613722,- | ||
|ontology_enrichment_celltype=CL:0000763!2.14e-13!112;CL:0000049!2.14e-13!112;CL:0002139!5.37e-11!24;CL:0000071!5.95e-09!18;CL:0002546!5.95e-09!18;CL:0000840!2.03e-08!5;CL:0001029!2.03e-08!5;CL:0002032!7.87e-08!165;CL:0000837!7.87e-08!165;CL:0000037!8.64e-08!172;CL:0000566!8.64e-08!172;CL:0000988!2.41e-07!182 | |ontology_enrichment_celltype=CL:0000763!2.14e-13!112;CL:0000049!2.14e-13!112;CL:0002139!5.37e-11!24;CL:0000071!5.95e-09!18;CL:0002546!5.95e-09!18;CL:0000840!2.03e-08!5;CL:0001029!2.03e-08!5;CL:0002032!7.87e-08!165;CL:0000837!7.87e-08!165;CL:0000037!8.64e-08!172;CL:0000566!8.64e-08!172;CL:0000988!2.41e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000763;1.47e-11;100!CL:0000037;2.74e-07;1!CL:0001024;2.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.04e-20,108;CL:0000049,2.04e-20,108;CL:0000037,7.69e-13,168;CL:0002032,3.46e-12,161;CL:0000837,3.46e-12,161;CL:0000988,6.07e-12,177;CL:0001024,2.82e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000049;4.70e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!4.87e-18!31;DOID:1240!1.07e-14!39;DOID:2531!7.89e-14!51;DOID:0060083!7.89e-14!51 | |ontology_enrichment_disease=DOID:8692!4.87e-18!31;DOID:1240!1.07e-14!39;DOID:2531!7.89e-14!51;DOID:0060083!7.89e-14!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.07e-32;31!DOID:1240;4.61e-20;39!DOID:2531;3.34e-13;51!DOID:0060083;3.34e-13;51!DOID:9119;2.09e-07;1!DOID:1036;3.06e-07;8!DOID:8552;3.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.26e-33,31;DOID:1240,4.09e-26,39;DOID:2531,2.87e-19,51;DOID:0060083,2.87e-19,51;DOID:9119,2.09e-07,1;DOID:1036,3.06e-07,8;DOID:8552,3.78e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!5.95e-09!18;UBERON:0004638!5.95e-09!18;UBERON:0004852!5.95e-09!18;UBERON:0004872!6.71e-08!84;UBERON:0003081!9.49e-08!216;UBERON:0000055!1.63e-07!69;UBERON:0000487!6.26e-07!22 | |ontology_enrichment_uberon=UBERON:0001986!5.95e-09!18;UBERON:0004638!5.95e-09!18;UBERON:0004852!5.95e-09!18;UBERON:0004872!6.71e-08!84;UBERON:0003081!9.49e-08!216;UBERON:0000055!1.63e-07!69;UBERON:0000487!6.26e-07!22 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:27613673..27613722,- | |short_description=p@chr12:27613673..27613722,- | ||
}} | }} |
Latest revision as of 07:53, 24 July 2015
Short description: | p@chr12:27613673..27613722, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:27613673..27613722, - |
Coexpression cluster: | C307_acute_chronic_leukemia_CD133_Mast_CD34_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.04e-20 | 108 |
common myeloid progenitor | 2.04e-20 | 108 |
hematopoietic stem cell | 7.69e-13 | 168 |
hematopoietic oligopotent progenitor cell | 3.46e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.46e-12 | 161 |
hematopoietic cell | 6.07e-12 | 177 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.82e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.26e-33 | 31 |
leukemia | 4.09e-26 | 39 |
hematologic cancer | 2.87e-19 | 51 |
immune system cancer | 2.87e-19 | 51 |
acute myeloid leukemia | 2.09e-07 | 1 |
chronic leukemia | 3.06e-07 | 8 |
chronic myeloid leukemia | 3.78e-07 | 1 |