FFCP PHASE1:Hg19::chr12:1739131..1739158,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81029 | |EntrezGene=81029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16265 | |HGNC=16265 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENST00000543563_5end | |association_with_transcript=68bp_to_ENST00000543563_5end | ||
|cluster_id=chr12:1739131..1739158,+ | |||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description=CAGE_peak_5_at_WNT5B_5end | |description=CAGE_peak_5_at_WNT5B_5end | ||
|id=chr12:1739131..1739158,+ | |id=chr12:1739131..1739158,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.22e-09!7;CL:0000586!6.22e-09!7 | |ontology_enrichment_celltype=CL:0000039!6.22e-09!7;CL:0000586!6.22e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.32e-64;7!CL:0000586;1.32e-64;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.12e-64,7;CL:0000586,1.12e-64,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.77e-45;10!UBERON:0005564;1.77e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!2.65e-09!22;DOID:2994!2.65e-09!22 | |ontology_enrichment_disease=DOID:3095!2.65e-09!22;DOID:2994!2.65e-09!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.24e-32;22!DOID:2994;2.24e-32;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.17e-32,22;DOID:2994,2.17e-32,22;DOID:305,7.18e-10,106;DOID:0050687,2.36e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002616!1.57e-17!59;UBERON:0007023!2.94e-17!115;UBERON:0001049!2.55e-16!57;UBERON:0005068!2.55e-16!57;UBERON:0006241!2.55e-16!57;UBERON:0007135!2.55e-16!57;UBERON:0000073!2.47e-15!94;UBERON:0001016!2.47e-15!94;UBERON:0002780!1.30e-14!41;UBERON:0001890!1.30e-14!41;UBERON:0006240!1.30e-14!41;UBERON:0003080!3.43e-14!42;UBERON:0000955!4.81e-14!69;UBERON:0006238!4.81e-14!69;UBERON:0002020!8.29e-14!34;UBERON:0003528!8.29e-14!34;UBERON:0002308!9.96e-14!9;UBERON:0000125!9.96e-14!9;UBERON:0001893!1.67e-13!34;UBERON:0005743!5.32e-13!86;UBERON:0001017!2.14e-12!82;UBERON:0001869!2.24e-12!32;UBERON:0002346!2.36e-12!90;UBERON:0002791!6.26e-12!33;UBERON:0003075!7.88e-12!86;UBERON:0007284!7.88e-12!86;UBERON:0000988!4.54e-11!3;UBERON:0003056!3.34e-10!61;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0000369!1.36e-08!4;UBERON:0002435!1.36e-08!4;UBERON:0000204!1.36e-08!4;UBERON:0010082!1.36e-08!4;UBERON:0009663!2.09e-08!7;UBERON:0003135!2.24e-08!11;UBERON:0002148!5.90e-08!2;UBERON:0009662!5.90e-08!2;UBERON:0000473!8.31e-08!8;UBERON:0001950!4.94e-07!20;UBERON:0002298!6.02e-07!8;UBERON:0000033!7.93e-07!123 | |ontology_enrichment_uberon=UBERON:0002616!1.57e-17!59;UBERON:0007023!2.94e-17!115;UBERON:0001049!2.55e-16!57;UBERON:0005068!2.55e-16!57;UBERON:0006241!2.55e-16!57;UBERON:0007135!2.55e-16!57;UBERON:0000073!2.47e-15!94;UBERON:0001016!2.47e-15!94;UBERON:0002780!1.30e-14!41;UBERON:0001890!1.30e-14!41;UBERON:0006240!1.30e-14!41;UBERON:0003080!3.43e-14!42;UBERON:0000955!4.81e-14!69;UBERON:0006238!4.81e-14!69;UBERON:0002020!8.29e-14!34;UBERON:0003528!8.29e-14!34;UBERON:0002308!9.96e-14!9;UBERON:0000125!9.96e-14!9;UBERON:0001893!1.67e-13!34;UBERON:0005743!5.32e-13!86;UBERON:0001017!2.14e-12!82;UBERON:0001869!2.24e-12!32;UBERON:0002346!2.36e-12!90;UBERON:0002791!6.26e-12!33;UBERON:0003075!7.88e-12!86;UBERON:0007284!7.88e-12!86;UBERON:0000988!4.54e-11!3;UBERON:0003056!3.34e-10!61;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0000369!1.36e-08!4;UBERON:0002435!1.36e-08!4;UBERON:0000204!1.36e-08!4;UBERON:0010082!1.36e-08!4;UBERON:0009663!2.09e-08!7;UBERON:0003135!2.24e-08!11;UBERON:0002148!5.90e-08!2;UBERON:0009662!5.90e-08!2;UBERON:0000473!8.31e-08!8;UBERON:0001950!4.94e-07!20;UBERON:0002298!6.02e-07!8;UBERON:0000033!7.93e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-56;8!UBERON:0003135;2.04e-41;11!UBERON:0000991;4.92e-22;21!UBERON:0003101;4.61e-21;22!UBERON:0000079;4.61e-21;22!UBERON:0002323;5.90e-10;45!UBERON:0003133;2.99e-08;44!UBERON:0000922;5.70e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.06e-56,8;UBERON:0003135,1.83e-41,11;UBERON:0000991,4.66e-22,21;UBERON:0009196,4.66e-22,21;UBERON:0009117,4.66e-22,21;UBERON:0005564,4.66e-22,21;UBERON:0004176,4.38e-21,22;UBERON:0003101,4.38e-21,22;UBERON:0000079,4.38e-21,22;UBERON:0002323,2.27e-10,46;UBERON:0003133,5.88e-10,48;UBERON:0004458,9.18e-10,49;UBERON:0003886,6.69e-09,54;UBERON:0005156,3.49e-08,59;UBERON:0000990,3.49e-08,59;UBERON:0002553,6.28e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0.471346769748006,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.5647304101948,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,6.08152804854898,16.3182127587171,2.40495664739004,24.2602534771991,2.50707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,6.98975697164723,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.203909198930495,0,0,0,0,0.471346769748006,0,0,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0.233939463462106,0.397901550322736,0,0.5647304101948,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,6.08152804854898,16.3182127587171,2.40495664739004,24.2602534771991,2.50707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@WNT5B | |short_description=p5@WNT5B | ||
}} | }} |
Latest revision as of 17:01, 17 September 2015
Short description: | p5@WNT5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WNT5B_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 68bp_to_ENST00000543563_5end |
EntrezGene: | WNT5B |
HGNC: | 16265 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.12e-64 | 7 |
germ cell | 1.12e-64 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.06e-56 | 8 |
male reproductive organ | 1.83e-41 | 11 |
gonad | 4.66e-22 | 21 |
indifferent external genitalia | 4.66e-22 | 21 |
indifferent gonad | 4.66e-22 | 21 |
gonad primordium | 4.66e-22 | 21 |
external genitalia | 4.38e-21 | 22 |
male organism | 4.38e-21 | 22 |
male reproductive system | 4.38e-21 | 22 |
body cavity | 2.27e-10 | 46 |
reproductive organ | 5.88e-10 | 48 |
body cavity or lining | 9.18e-10 | 49 |
body cavity precursor | 6.69e-09 | 54 |
reproductive structure | 3.49e-08 | 59 |
reproductive system | 3.49e-08 | 59 |
anatomical cavity | 6.28e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.17e-32 | 22 |
germ cell cancer | 2.17e-32 | 22 |
carcinoma | 7.18e-10 | 106 |
cell type cancer | 2.36e-07 | 143 |